BAC Information

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BAC

Clone NameB6Ng01-014M08
Chromosome1 (Build37)
Map Location 38,393,760 - 38,394,851
singlet/doubletsinglet
Overlap geneAff3
Upstream geneInpp4a, 6330578E17Rik, Unc50, Mgat4a, 2010300C02Rik, Tsga10, EG623661, Mitd1, Mrpl30, Gm776, 2300002O18Rik, Txndc9, EG666434, Eif5b, Rev1, EG329123
Downstream geneLonrf2, Chst10, EG625775, Nms, Pdcl3, Npas2, LOC100041999
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-014M08.bB6Ng01-014M08.g
ACCDH849219DH849220
length2191,097
definitionDH849219|Mus musculus domesticus DNA, BAC clone: B6Ng01-014M08, 5' end.DH849220|Mus musculus domesticus DNA, BAC clone: B6Ng01-014M08, 3' end.
singlet/doublet---singlet
BLAST hitno hit dataunique
sequence
gaattctagaaataaattattcatgagtttaaattacttttattacagca
tatgggtataattgttcccttttatcattagtaattgttgttaatctctt
actgtgcctaatttataaattaaactttatcataggggtttgtgtgtagg
cagaaatgaagtacatagagagctggtagtatccatggtttctggcattg
actgggggggggggtgttg
gaattcagctaacgattctgaagtacgagtttattcggggaggctcaata
taatttcaatattccggatgagacaaaggaggggtttagagggagccaga
gaacacaagacaggcaaggatcttagcaaggatccttccagaactcagca
aagaaagaaaccaagttgtcccaaagagcagcgctctggcctggaacctg
atttcagtcagtgaacctggcctcaaggctctgccccatccctagagtag
tgagacagtgaattgcatgatacaaatgtgtacatgtaatgacacacgcc
atcgcagacactgagtgtgcagcaacgctacaacacaagccagaagggac
acagactcagctcaccataagatcatattctcagggagtctgtctaagag
aaggcgttagtaagaccactcacactcctgcaagtaaagcaatttacatg
ctcaccctagagatgagcacctcgcaaacccctacagtggtcctaaataa
gacagttttcattcatgtttgaaatctcttccctttcaatacgtaatagg
atatttttcagtaaaaaaaaaaaaatagacaacttttagctatttgttat
aaaatttggatttttcccaggtgcgtcatctcctgtgaagtcatttggag
catgaccattttgttaacacaaatatatatttttgcctcattcttccatg
gccacttcaagccccggaaactaccatcctctcctttgcttctgtaggtc
tgacaatattagatcctacatagacttagaatcataagtgataatacaat
atttatcttttgggttttggcttattttcatttacatgtgcagacacaca
cattttacacacacctgcacatttctacaataatagacccatataaatgc
agcatgtgtgtgatatgtgacatacatgtatacatgtcatatatgtgaaa
gtatgaatgatatgtagcatatatgtcagaaatacaactgcagttaaata
ttacaatgactttatcatacactaagatctgctaagaaggacagatcttt
gtgcatggcgtattgtgcatgcaatgtatgtgcatatatgtttcctg
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr1_38393760_38394851
seq2: B6Ng01-014M08.g_67_1163

seq1  GAATTCAGCTAACGATTCTGAAGTACGAGTTTATTCGGGGAGGCTCAATA  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCAGCTAACGATTCTGAAGTACGAGTTTATTCGGGGAGGCTCAATA  50

seq1  TAATTTCAATATTCCGGATGAGACAAAGGAGGGGTTTAGAGGGAGCCAGA  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAATTTCAATATTCCGGATGAGACAAAGGAGGGGTTTAGAGGGAGCCAGA  100

seq1  GAACACAAGACAGGCAAGGATCTTAGCAAGGATCCTTCCAGAACTCAGCA  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAACACAAGACAGGCAAGGATCTTAGCAAGGATCCTTCCAGAACTCAGCA  150

seq1  AAGAAAGAAACCAAGTTGTCCCAAAGAGCAGCGCTCTGGCCTGGAACCTG  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGAAAGAAACCAAGTTGTCCCAAAGAGCAGCGCTCTGGCCTGGAACCTG  200

seq1  ATTTCAGTCAGTGAACCTGGCCTCAAGGCTCTGCCCCATCCCTAGAGTAG  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTTCAGTCAGTGAACCTGGCCTCAAGGCTCTGCCCCATCCCTAGAGTAG  250

seq1  TGAGACAGTGAATTGCATGATACAAATGTGTACATGTAATGACACACGCC  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGAGACAGTGAATTGCATGATACAAATGTGTACATGTAATGACACACGCC  300

seq1  ATCGCAGACACTGAGTGTGCAGCAACGCTACAACACAAGCCAGAAGGGAC  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATCGCAGACACTGAGTGTGCAGCAACGCTACAACACAAGCCAGAAGGGAC  350

seq1  ACAGACTCAGCTCACCATAAGATCATATTCTCAGGGAGTCTGTCTAAGAG  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACAGACTCAGCTCACCATAAGATCATATTCTCAGGGAGTCTGTCTAAGAG  400

seq1  AAGGCGTTAGTAAGACCACTCACACTCCTGCAAGTAAAGCAATTTACATG  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGGCGTTAGTAAGACCACTCACACTCCTGCAAGTAAAGCAATTTACATG  450

seq1  CTCACCCTAGAGATGAGCACCTCGCAAACCCCTACAGTGGTCCTAAATAA  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCACCCTAGAGATGAGCACCTCGCAAACCCCTACAGTGGTCCTAAATAA  500

seq1  GACAGTTTTCATTCATGTTTGAAATCTCTTCCCTTTCAATACGTAATAGG  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GACAGTTTTCATTCATGTTTGAAATCTCTTCCCTTTCAATACGTAATAGG  550

seq1  ATATTTTTCAGTAAAAAAAAAAAAATAGACAACTTTTAGCTATTTGTTAT  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATATTTTTCAGTAAAAAAAAAAAAATAGACAACTTTTAGCTATTTGTTAT  600

seq1  AAAATTTGGATTTTTCCCAGGTGCGTCATCTCCTGTGAAGTCATTTGGAG  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAATTTGGATTTTTCCCAGGTGCGTCATCTCCTGTGAAGTCATTTGGAG  650

seq1  CATGACCATTTTGTTAACACAAATATATATTTTTGCCTCATTCTTCCATG  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATGACCATTTTGTTAACACAAATATATATTTTTGCCTCATTCTTCCATG  700

seq1  GCCACTTCAAGCCCCGGAAACTACCATCCTCTCCTTTGCTTCTGTAGGTC  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCCACTTCAAGCCCCGGAAACTACCATCCTCTCCTTTGCTTCTGTAGGTC  750

seq1  TGACAATATTAGATCCTACATAGACTTAGAATCATAAGTGATAATACAAT  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGACAATATTAGATCCTACATAGACTTAGAATCATAAGTGATAATACAAT  800

seq1  ATTTATCTTTT-GGTTTTGGCTTA-TTTCATTTACATGTGCAGACACACA  848
      ||||||||||| |||||||||||| |||||||||||||||||||||||||
seq2  ATTTATCTTTTGGGTTTTGGCTTATTTTCATTTACATGTGCAGACACACA  850

seq1  CA-TTTACACACACCTGCACA-TTCTAC-ATAATAGACCCATATAAATGC  895
      || |||||||||||||||||| |||||| |||||||||||||||||||||
seq2  CATTTTACACACACCTGCACATTTCTACAATAATAGACCCATATAAATGC  900

seq1  AGCATGTGTGTGATATGTGACATACATGTATACATGTCATATATGTGAAA  945
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGCATGTGTGTGATATGTGACATACATGTATACATGTCATATATGTGAAA  950

seq1  GGTATGAATGATATGTAGCATAATATGTCAGAAATACAACTGCAGTT-AA  994
       |||||||||||||||||||| ||||||||||||||||||||||||| ||
seq2  -GTATGAATGATATGTAGCAT-ATATGTCAGAAATACAACTGCAGTTAAA  998

seq1  TATTACAATGACTTTATCATACACTTAAGATCTGCTAAG-AGGACAGATC  1043
      |||||||||||||||||||||||| |||||||||||||| ||||||||||
seq2  TATTACAATGACTTTATCATACAC-TAAGATCTGCTAAGAAGGACAGATC  1047

seq1  TTTGTGCAT-GCGTA-TGTGCATGC-ATGTATGTGCATATATAATTTTCC  1090
      ||||||||| ||||| ||||||||| ||||||||||||||||   |||||
seq2  TTTGTGCATGGCGTATTGTGCATGCAATGTATGTGCATATAT--GTTTCC  1095

seq1  TG  1092
      ||
seq2  TG  1097