BAC Information

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BAC

Clone NameB6Ng01-014N02
Chromosome1 (Build37)
Map Location 106,399,127 - 106,399,760
singlet/doubletsinglet
Overlap geneLOC383546
Upstream genenone
Downstream geneLOC100041134, Cdh20, Rnf152, LOC100041985
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-014N02.bB6Ng01-014N02.g
ACCDH849253DH849254
length6341,162
definitionDH849253|Mus musculus domesticus DNA, BAC clone: B6Ng01-014N02, 5' end.DH849254|Mus musculus domesticus DNA, BAC clone: B6Ng01-014N02, 3' end.
singlet/doubletsinglet---
BLAST hituniqueno hit data
sequence
gaattccatcacatgccaccggagagcactcactggactggggtttatag
aaaacaaaataagagaacttagaatgcaaaggggggtattgggagtaaat
agagtggagcagagatttggaggaagatatgatcaagatacctgttgtta
acaggtacaaaattatcaacgaactaataatattctttttaaaagatacc
tgaccatttcttaataatatagaaactctgtttcctatgcagacgtgagg
aaagttactgcaatgaggtctgatgagcccttcatggtttcagttttctc
ttaccaagctctagtaagtgacaggaaataaaagcaagcatctaaaacca
aagaaatctgaagtcaaattctgcaaaatattcaggcagttaaaaaagca
tctttccctttctcagtttcctttggaaatatatgttgctagtagttgaa
ggatttttaagcaaaactgcatacagaattagataggtactcaagatgaa
aaggtacaatcaaaataaagtgtttcaataaagaaataaaagaacctaat
agaagacattggaggaattccagatactgggtcaactatgttcaaataac
catgacattatcaagtttccggtatgatgtcttt
gaattctcacattcggtagaatggcagagaagcacctgaaaaaatgttca
acatccttaatcatcagggaaatgcaaatcaaaacaaccctgagattcca
cctcacaccagaatggctaagatcaaaaattcaggtgacatcagatgctg
gcgaggatgtggagaaagaggaacactcctccatttttggtgggattgca
agcttgtacaaccactctggaaatcagtctggcgtttcctcagaaaattg
gccatagtactcccgctggatccagcaatacctctcctgggcatatatcc
agaagatgtcccaaccggtaagaaggacacatgctccactatgttcatag
cagccttatttataatagccagaagctggaaagaacccagatgcccctca
acagaggaatggatacagaaaatgtggtacatttacacaatggagtacta
ctcagctattaaaaagaaagaatttatgaaattcctagccaaatggatgg
acctggagggcatcatcctgagtaaggtaacacattcacaaaggaactca
cacaatatgtactcactgataagtggatattagcccaaaacctaggatac
ccaagatataagatacaatttgctaaacacatgaaactcaagaagaatga
agactgaagtgtggatactatgcccctccttagaaatggaaacaaaacac
ccatggaaggagttacagagacaaaatttggaactgagacgaaaggatgg
accatctagagactgccatatccagggatccaccccataatcagcttcca
aacgctgacaccattgcatacactagcaagattttatcgaaaggacccag
atgtagctgtctcttgtgagactaggccggggcctagcaaacacagaagt
ggatgctcacagtcagctattggatggatcacaggctcccatgagagcta
gagaagtacccagagctaaggatctgcaccctatcgtagacaacattatg
actaaacagttacccgagctctgactcttagctgcattgttatcaaagaa
tgctagtcggcatcactgcaaagagaggtccaatggaaacgcaactctta
tatttgccctaagttacaaggatgctcaggctataattggatatggtgtg
tgatgaggagtg
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr1_106399127_106399760
seq2: B6Ng01-014N02.b_48_681

seq1  GAATTCCATCACATGCCACCGGAGAGCACTCACTGGACTGGGGTTTATAG  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCCATCACATGCCACCGGAGAGCACTCACTGGACTGGGGTTTATAG  50

seq1  AAAACAAAATAAGAGAACTTAGAATGCAAAGGGGGGTATTGGGAGTAAAT  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAACAAAATAAGAGAACTTAGAATGCAAAGGGGGGTATTGGGAGTAAAT  100

seq1  AGAGTGGAGCAGAGATTTGGAGGAAGATATGATCAAGATACCTGTTGTTA  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGAGTGGAGCAGAGATTTGGAGGAAGATATGATCAAGATACCTGTTGTTA  150

seq1  ACAGGTACAAAATTATCAACGAACTAATAATATTCTTTTTAAAAGATACC  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACAGGTACAAAATTATCAACGAACTAATAATATTCTTTTTAAAAGATACC  200

seq1  TGACCATTTCTTAATAATATAGAAACTCTGTTTCCTATGCAGACGTGAGG  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGACCATTTCTTAATAATATAGAAACTCTGTTTCCTATGCAGACGTGAGG  250

seq1  AAAGTTACTGCAATGAGGTCTGATGAGCCCTTCATGGTTTCAGTTTTCTC  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAGTTACTGCAATGAGGTCTGATGAGCCCTTCATGGTTTCAGTTTTCTC  300

seq1  TTACCAAGCTCTAGTAAGTGACAGGAAATAAAAGCAAGCATCTAAAACCA  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTACCAAGCTCTAGTAAGTGACAGGAAATAAAAGCAAGCATCTAAAACCA  350

seq1  AAGAAATCTGAAGTCAAATTCTGCAAAATATTCAGGCAGTTAAAAAAGCA  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGAAATCTGAAGTCAAATTCTGCAAAATATTCAGGCAGTTAAAAAAGCA  400

seq1  TCTTTCCCTTTCTCAGTTTCCTTTGGAAATATATGTTGCTAGTAGTTGAA  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTTTCCCTTTCTCAGTTTCCTTTGGAAATATATGTTGCTAGTAGTTGAA  450

seq1  GGATTTTTAAGCAAAACTGCATACAGAATTAGATAGGTACTCAAGATGAA  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGATTTTTAAGCAAAACTGCATACAGAATTAGATAGGTACTCAAGATGAA  500

seq1  AAGGTACAATCAAAATAAAGTGTTTCAATAAAGAAATAAAAGAACCTAAT  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGGTACAATCAAAATAAAGTGTTTCAATAAAGAAATAAAAGAACCTAAT  550

seq1  AGAAGACATTGGAGGAATTCCAGATACTGGGTCAACTATGTTCAAATAAC  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGAAGACATTGGAGGAATTCCAGATACTGGGTCAACTATGTTCAAATAAC  600

seq1  CATGACATTATCAAGTTACCGGTATGATGTCTTT  634
      ||||||||||||||||| ||||||||||||||||
seq2  CATGACATTATCAAGTTTCCGGTATGATGTCTTT  634