BAC Information

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BAC

Clone NameB6Ng01-015B22
Chromosome1 (Build37)
Map Location 150,278,910 - 150,280,080
singlet/doubletsinglet
Overlap genenone
Upstream genenone
Downstream geneLOC100042792, LOC435647
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-015B22.bB6Ng01-015B22.g
ACCDH849466DH849467
length1,1831,165
definitionDH849466|Mus musculus domesticus DNA, BAC clone: B6Ng01-015B22, 5' end.DH849467|Mus musculus domesticus DNA, BAC clone: B6Ng01-015B22, 3' end.
singlet/doublet---singlet
BLAST hitno hit dataunique
sequence
gaattctcacccgaggaatatcgaatggcagagaagcacctgaaaaaatg
ctcaacatccttaatcctcagggaaatgcaaatcaaaacaacccttagat
tccacctcacaccagtcagaatggctaagatcaaaaattcaggtgacagc
agatactggcaaggatgtggagaaagaggaacactcctccattgttggtg
ggattgcaagcttgtacaagcactctggaaatcagtctggtggttcctca
gaaaattggacatagtactacaggagaatccctcaatacctctcctgggc
atatatccagaagatgtcccaaccggtaagaaggacacatgctccactat
gttcatagcagccttatttataatagccagaagctggaaagaacccagat
gcccctcaacagaggaatggatacagaaaatgtggtacatttacacaatg
gagtactactcagctattaaaaagaatgcatttatgaaattcctagccaa
atggatggacctggaggacatcatcctgagtgaggtaacccaatcacaaa
ggaactcacacaatatgtactcactgataagtggatattagcccagaaac
ttaggatacccaagatgtaagatacaatttgctaatcgcatgaaactcaa
gaagaatgaagaccaaagtgtggacactttgccccttcttagaattggga
acaaaacacccttcttaggattgggaacaaaacacccaaagacaaagttt
ggagctgtgacaaaaggatggaccatctagagactgccatatccagggat
ccatcccataatcagcttccaaacgctgacaccattgcacacactagcaa
gattttgctgaaaggacccagatatagctctctcttgtgagactatgccg
gggcctaggaaacacagaagtggatgctcacagtcagctattggatggat
cacaggccccaatggaggagctagagaaagtacccaaggagcttaacggg
atctgcacctataggtggaacacattatgactacagtacccagagctctt
gacctctagctgcatatgtatcaaagatggccatagttgcatcactggaa
gagaggccattgaacctgccactttaatagtcccagtacagggcgaatgc
ccaggcctaattgttggacagctcgtgtgctca
gaattcttagtttctgctgagagtagaagagactttccatcataaataat
gtaattaatgtacttgtatactgagttttaatgtattagaaacataattg
gaaaacctgatctttgtgttgtaatatattaatgtaaaaaatagcattga
gatttcttttagaggacagagatacacagtgattcattttaaattccaga
aacaataatcaataaattgtcattcttttctaaaactcctctttataaat
tctatgaaagctttaaaatttgtgtagttgaacttcattcattccattaa
tgttgaggtttgcaaacatcaaatgaaacattataagctaatacacacaa
ctatccagatactttgcccagatataatgccatttgtactgaaaagtacc
atactgtacaggccaaatggaggatgaaacctaaacccgcaagcttcata
ttttacccaatgcaatgcatgaagccttgtctagagaaatgagaaggaaa
ttaaaaagcatatgaatagaaaaacaaaagcaattttatctgaaaataat
aagattctgtataaatgacctaaagactgaaccattacacttatagaaaa
atctatcattataggtttaatatttgacgtatatttacaatacttttcct
atatacaaataagaaatattttcatgaaacaacttcatacaagccctgtc
agtctgtcattagaaaacaaataggcatctaagaactaataaaataagat
taatagaaaaacaaacaaactgaaatacgacaaaaaaaaaaaaaaccaaa
aaacaaaaaacaaacagaacaaaataaaacaaaacaaaaaccaagaaaaa
gcccaaagaaacacccataaacacacagatacactcccattgtcaccaca
caagaataccataaaacatcaaactcagaagagaaaatatgatcaatgga
tctgtaggtttaagtaaaatgcccagactttacattttgaaacaaagaaa
ttcaaaagacaccttcctttgagttcatttctgttggcaatctgttagtg
atcaggaagctatcttaaaaactgtcatttctacaattgaagactcctgg
aaaaataggttttcattgcaaggttcaatcaatggagggtagcttggaga
agagatatgggtgca
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr1_150278910_150280080
seq2: B6Ng01-015B22.g_66_1230

seq1  GAATTCTTAGTTTCTGCTGAGAGTAGAAGAGACTTTCCATCATAAATAAT  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCTTAGTTTCTGCTGAGAGTAGAAGAGACTTTCCATCATAAATAAT  50

seq1  GTAATTAATGTACTTGTATACTGAGTTTTAATGTATTAGAAACATAATTG  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTAATTAATGTACTTGTATACTGAGTTTTAATGTATTAGAAACATAATTG  100

seq1  GAAAACCTGATCTTTGTGTTGTAATATATTAATGTAAAAAATAGCATTGA  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAAAACCTGATCTTTGTGTTGTAATATATTAATGTAAAAAATAGCATTGA  150

seq1  GATTTCTTTTAGAGGACAGAGATACACAGTGATTCATTTTAAATTCCAGA  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GATTTCTTTTAGAGGACAGAGATACACAGTGATTCATTTTAAATTCCAGA  200

seq1  AACAATAATCAATAAATTGTCATTCTTTTCTAAAACTCCTCTTTATAAAT  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AACAATAATCAATAAATTGTCATTCTTTTCTAAAACTCCTCTTTATAAAT  250

seq1  TCTATGAAAGCTTTAAAATTTGTGTAGTTGAACTTCATTCATTCCATTAA  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTATGAAAGCTTTAAAATTTGTGTAGTTGAACTTCATTCATTCCATTAA  300

seq1  TGTTGAGGTTTGCAAACATCAAATGAAACATTATAAGCTAATACACACAA  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTTGAGGTTTGCAAACATCAAATGAAACATTATAAGCTAATACACACAA  350

seq1  CTATCCAGATACTTTGCCCAGATATAATGCCATTTGTACTGAAAAGTACC  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTATCCAGATACTTTGCCCAGATATAATGCCATTTGTACTGAAAAGTACC  400

seq1  ATACTGTACAGGCCAAATGGAGGATGAAACCTAAACCCGCAAGCTTCATA  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATACTGTACAGGCCAAATGGAGGATGAAACCTAAACCCGCAAGCTTCATA  450

seq1  TTTTACCCAATGCAATGCATGAAGCCTTGTCTAGAGAAATGAGAAGGAAA  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTTACCCAATGCAATGCATGAAGCCTTGTCTAGAGAAATGAGAAGGAAA  500

seq1  TTAAAAAGCATATGAATAGAAAAACAAAAGCAATTTTATCTGAAAATAAT  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTAAAAAGCATATGAATAGAAAAACAAAAGCAATTTTATCTGAAAATAAT  550

seq1  AAGATTCTGTATAAATGACCTAAAGACTGAACCATTACACTTATAGAAAA  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGATTCTGTATAAATGACCTAAAGACTGAACCATTACACTTATAGAAAA  600

seq1  ATCTATCATTATAGGTTTAATATTTGACGTATATTTACAATACTTTTCCT  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATCTATCATTATAGGTTTAATATTTGACGTATATTTACAATACTTTTCCT  650

seq1  ATATACAAATAAGAAATATTTTCATGAAACAACTTCATACAAGCCCTGTC  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATATACAAATAAGAAATATTTTCATGAAACAACTTCATACAAGCCCTGTC  700

seq1  AGTCTGTCATTAGAAAACAAATAGGCATCTAAGAACTAATAAAATAAGAT  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTCTGTCATTAGAAAACAAATAGGCATCTAAGAACTAATAAAATAAGAT  750

seq1  TAATAGAAAAACAAACAAACTGAAATACGACAAAAAAAAAAAAAACCAAA  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAATAGAAAAACAAACAAACTGAAATACGACAAAAAAAAAAAAAACCAAA  800

seq1  AAACAAAAAACAAACAGAACAAAATAAAACAAAACAAAAACCAAGAAAAA  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAACAAAAAACAAACAGAACAAAATAAAACAAAACAAAAACCAAGAAAAA  850

seq1  G-CCAAAGAAACACCCATAAACACACAGATACACTCCCATTGTCACCACA  899
      | ||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCCCAAAGAAACACCCATAAACACACAGATACACTCCCATTGTCACCACA  900

seq1  CAAGAATACCATAAAACATCAAACTCAGAAGAGAAAATATGATCAATGGA  949
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAAGAATACCATAAAACATCAAACTCAGAAGAGAAAATATGATCAATGGA  950

seq1  TCTGTAAGGTTTAAGTAAAATGCCCAGACTTTACATTTTGAAACAAAGAA  999
      ||||| ||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTGT-AGGTTTAAGTAAAATGCCCAGACTTTACATTTTGAAACAAAGAA  999

seq1  ATTCAAAAGACACCTTCCTTTGAGTTCATTTCTGTTGGCAATCTGTTAGT  1049
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTCAAAAGACACCTTCCTTTGAGTTCATTTCTGTTGGCAATCTGTTAGT  1049

seq1  GATCAGGAGGCCTATCTTTAAGAACTGTTCATTTCTACAAT--GAGACTC  1097
      |||||||| | ||||| |||| ||||| |||||||||||||   ||||||
seq2  GATCAGGAAG-CTATC-TTAAAAACTG-TCATTTCTACAATTGAAGACTC  1096

seq1  CCTTGGATAAAATTAAGTTTTCATTTGCAAGTGTCCATCAATTGGAGGTA  1147
      |  |||  |||| || ||||||| |||||||  || |||||| |  ||||
seq2  C--TGG--AAAAATAGGTTTTCA-TTGCAAGGTTCAATCAATGGAGGGTA  1141

seq1  GCTTCTGAG-AGAGTAATGGGTGCA  1171
      ||||  ||| ||||  |||||||||
seq2  GCTT-GGAGAAGAGATATGGGTGCA  1165