BAC Information

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BAC

Clone NameB6Ng01-015G01
Chromosome1 (Build37)
Map Location 81,979,718 - 81,980,241
singlet/doubletsinglet
Overlap genenone
Upstream gene9430031J16Rik, EG621020, LOC433328, EG665145
Downstream geneIrs1, Rhbdd1, Col4a4, Col4a3, 5230400G24Rik, Tm4sf20, LOC100039491, Hrb, A030005L19Rik, A030014E15Rik, EG621362, A030003K21Rik, LOC665225, LOC100039524
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-015G01.bB6Ng01-015G01.g
ACCDH849651DH849652
length1,086882
definitionDH849651|Mus musculus domesticus DNA, BAC clone: B6Ng01-015G01, 5' end.DH849652|Mus musculus domesticus DNA, BAC clone: B6Ng01-015G01, 3' end.
singlet/doublet---singlet
BLAST hitno hit dataunique
sequence
gaattctttgtttagctctgaaccccatttttaatggggttatttaaatt
tctgaagtccagcaacttgagctctttgtatatattggatattagtcccc
tatcagatttagaattggtaaaaattctttcacaatcttttggtggcctt
tttttgtcttattggcagtgttttttgccttacagaagctttgaaatttt
atgaggtcccatttgtcaattcttgatcttacagcacaagccattgctgt
tttgtttaggatttttttcccctgtgcacatatctttgaggctttccccc
acttcctcctctataaatttcaatgtctctgtttttatttggaattcttt
gatccacttagacttgagatttgtacaaggtgataagaatggatcaattc
aaattcttataaatgatatctgccagttctgccagcaccatttattgaaa
atgctgtctttttccacttaatggttttagctcctttgtcaaagatcaag
taaccataggtgtgtggattaatttctgggtcttcaattctattccattg
atctacctgtctgttgctgtaccagtaccacgcagttttttatcacaatt
gctctgtagtacagttgaggtcaagcatggttattctaccagaagttctt
tctattgttgagaatagtttttgctatcttaggttttttgttattccatt
gaatttgcacattgccctttctaactcagtgaagaattgagttggatttt
gagagagattgcattgcatctgttagatttctttcagcaaggtagccatt
tttactatattaatcttgccaatccatgagcatgggagatccttctatct
tctgagtttctttcttgaagttcttatcatacagatctttactccttagt
agagtcacaccaagtatttatattttttgactattatgaaggtgtgtttc
ctactctttccagctttatccttgttagacaagacattgctattgagtta
atttaatctagctactgccctgaagctgattatcaagcctaggggttctt
ggtggatctttagggccactaattatatctgaactc
gaattcagaactcttcagctggggaatggtggtaatgaagtgttcccaca
acacagactgttgagaaggattcaactgcgtgaattcagaactcttcagc
tggggaacagggtacccgtaagtatagctttacaaggtaagtctggtctt
gaactttctaacgaaattcaagacagtctatcagaagtaaagtggggaat
agctttacaaggtaagtctggccttgaactttctaacgaaattcaagaca
gtctatcagaagtaaagtggaaaatagctttacaaggtatgtttggcctt
gaactttctccagtgttaggagcctttttgttccttttcacatgttatca
agcggttaaggcagggctgaaaattctggatgaaattcagggcaatctat
caaaagtaaagcggggagagagagtaggagcaaagaggaaatatgtttca
caaaataagtatacaggcctttccacgggtcttaaacctgaggaaaagtt
taggtcaggtaagaatacctggggagagattggaaggaaggagaaggaaa
aagaaaagaaaaaagatcaattagcggaggtctctaggagaaggagccta
tacttatcactagatgagctcaaggagccagttcttaatagttctgaatc
agatgaaaaggctattagggcctggaaggcgctctccggagcaggtgaag
ccactggacaactaacaaagatcgtccagggacctcaggagtcattctca
gattttgtggccagaatgacagaggcagcagagcgtatttttggagattc
agagcaagccgcacctctggttagaatagtttatttatgagcaagccacg
caggaatgcagagcggcccatagccccagaaa
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr1_81979718_81980241
seq2: B6Ng01-015G01.g_65_588

seq1  GAATTCAGAACTCTTCAGCTGGGGAATGGTGGTAATGAAGTGTTCCCACA  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCAGAACTCTTCAGCTGGGGAATGGTGGTAATGAAGTGTTCCCACA  50

seq1  ACACAGACTGTTGAGAAGGATTCAACTGCGTGAATTCAGAACTCTTCAGC  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACACAGACTGTTGAGAAGGATTCAACTGCGTGAATTCAGAACTCTTCAGC  100

seq1  TGGGGAACAGGGTACCCGTAAGTATAGCTTTACAAGGTAAGTCTGGCCTT  150
      |||||||||||||||||||||||||||||||||||||||||||||| |||
seq2  TGGGGAACAGGGTACCCGTAAGTATAGCTTTACAAGGTAAGTCTGGTCTT  150

seq1  GAACTTTCTAACGAAATTCAAGACAGTCTATCAGAAGTAAAGTGGGAAAT  200
      |||||||||||||||||||||||||||||||||||||||||||||| |||
seq2  GAACTTTCTAACGAAATTCAAGACAGTCTATCAGAAGTAAAGTGGGGAAT  200

seq1  AGCTTTACAAGGTAAGTCTGGTCTTGAACTTTCTAACGAAATTCAAGACA  250
      ||||||||||||||||||||| ||||||||||||||||||||||||||||
seq2  AGCTTTACAAGGTAAGTCTGGCCTTGAACTTTCTAACGAAATTCAAGACA  250

seq1  GTCTATCAGAAGTAAAGTGGGAAATAGCTTTACAAGGTATGTTTGGCCTT  300
      |||||||||||||||||||| |||||||||||||||||||||||||||||
seq2  GTCTATCAGAAGTAAAGTGGAAAATAGCTTTACAAGGTATGTTTGGCCTT  300

seq1  GAACTTTCTCCAGTGTTAGGAGCCTTTTTGTTCCTTTTCACATGTTATCA  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAACTTTCTCCAGTGTTAGGAGCCTTTTTGTTCCTTTTCACATGTTATCA  350

seq1  AGTGGTTAAGGCAGGGCTGAAAATTCTGGATGAAATTCAGGGCAATCTAT  400
      || |||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGCGGTTAAGGCAGGGCTGAAAATTCTGGATGAAATTCAGGGCAATCTAT  400

seq1  CAGAAGTAAAGCGGGGAGAGAGAGTAGGAGCAAAGAGGAAATATGGTTCA  450
      || |||||||||||||||||||||||||||||||||||||||||| ||||
seq2  CAAAAGTAAAGCGGGGAGAGAGAGTAGGAGCAAAGAGGAAATATGTTTCA  450

seq1  CAAAATAAGTATACAGGCCTTTCCAAGGGTCTTGAACCCAAGGAAAAGTT  500
      ||||||||||||||||||||||||| ||||||| ||||  ||||||||||
seq2  CAAAATAAGTATACAGGCCTTTCCACGGGTCTTAAACCTGAGGAAAAGTT  500

seq1  TAGGTCAGGTAAGAATACCTGGGG  524
      ||||||||||||||||||||||||
seq2  TAGGTCAGGTAAGAATACCTGGGG  524