BAC Information

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BAC

Clone NameB6Ng01-017B19
Chromosome1 (Build37)
Map Location 19,670,586 - 19,671,706
singlet/doubletsinglet
Overlap genenone
Upstream geneLOC383499, EG435611, LOC100040189, Tcfap2d, LOC100040413, Tcfap2b, LOC100040198, LOC226901
Downstream genePkhd1
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-017B19.bB6Ng01-017B19.g
ACCDH850886DH850887
length1,1311,132
definitionDH850886|Mus musculus domesticus DNA, BAC clone: B6Ng01-017B19, 5' end.DH850887|Mus musculus domesticus DNA, BAC clone: B6Ng01-017B19, 3' end.
singlet/doublet---singlet
BLAST hitno hit dataunique
sequence
gaattctcaactgaggaataccgaatggctaagaagcacctgaaaaaaaa
atattcagcatccttaatcatcagggaaatcaaaacaaccctgagattcc
acctcacaccagtcagaatggctaagatcaaaaacttagatgacagcagt
tgctggtgaggatgtggagaaaaaggaacactcctccattgttggtggga
ttgaaaactggtacaaccattctggaaatcagtttggcagttcctcagaa
aattgaacatagtactacctgaggaccccgctacaccactcctggccata
tactcagaagatgctccaacatgtaaaaagaacacatgttccattatgtt
catagcatccttatttataatagccagaaactggaaagacccagatgtcc
ctcaacagaggaatagatacagaaaatgtggtacatttacacaatggagt
gttactcaactattaaaaaacaacaaaattatgaaattcagaggaaaatg
gatggatctggagtgtattttcctgagtgaggtaacccaattacaaaaga
acacatatgatatgcactcactaataagtggatattagcacagaacccta
gaagctcagaatacctaagagtagacactgaagaaataatcatctagaga
ctgactcacctggggatccatcccatttactatgaaacccagacagtgtt
ttggacgccaacaagtgcttgctggcaggagcctgatataactctctcct
gagaggctctgccagtgcctcacaaatacagaggtggatgctcacagcca
tccattggactgagcataggaaccccaatgaaggagcaggagaaagtacc
caaggagctgaaggggttttcatccccataggaggaacaacatgaactag
ccagtacccccagagctcccagggactaaacaaccaacccaaagagcata
catggtggactcatggctccagctgcagatgcagcagagatggtctagta
gacatcaatgggagagacgccctttgtcctatggagctctatgcctcagt
gttgggaataaccagagccagtagtgagagttgcttgtttggaggccact
gagtaggttcgaaggaaatggggtatgttat
gaattccacagggatcaatctaaggtaggctcgggagtatttaacatttt
taggtatgagcttgatgtaaaccgcaagtgaaaacacaaagatattatcc
aattcagaagcatttcaaagcagggggagcccaaaaaaagcatcagtcaa
agtgaagtgacagctacagagaagaaaaaaatgtgtccggtctgtgcttc
taaaggtggttaccaccccaaataagtagcttgcttttaattagcaaaac
cttcaaataatctagttgaagtaggcaactgttctccaactgggacttgg
gagaagatactcagcagttaagaccagtggctgcacttccagaggactca
ggttagattctcaactaccacatggtggctcacaaccatctgtaactcca
aaccctggggcctctgagggtatcaagtacgtgtgtacatggtgcatttc
cctagggtggggaataagttgctagtactggactactacaattcgagtac
tgaggccccaacctgccttgtttgcaaatgtaatcagaagggattgtaat
cactgcaggtcttaactttgaggagctgctcacaaaaacacattggagga
ttttctatattgattaagcacagtaatattaatacatatttttttgcctc
cagtcacttctttcttcagaatattcccagctgggactgtgcaagtttct
ctgattctagctgaatactaatgcagtcaacttcacggcggtgaccattt
gacccaggtctttttttcctttctctcctctatacctcccacccccccct
ctctcggtttctccagagaaaatagccttccaggtttcagcgtggggctc
acgtgtcttcttgggttaccatcgaggcagtgacggatggttcacagtat
tgccttgccttgatctcgtcacatcaggaactgctctcaagtctcagtca
ttctctgacagcttttgagcagagaaatgagacagtcctcccttgacaca
aatgctttctggcctggggtaaaaaattccctttggaaagaaaaaattcg
aaccactcctacagaccaacactgcctttcattcatcttgtaagtcttgg
cccaatcattccaagctcccccattagctttc
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr1_19670586_19671706
seq2: B6Ng01-017B19.g_67_1198

seq1  GAATTCCACAGGGATCAATCTAAGGTAGGCTCGGGAGTATTTAACATTTT  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCCACAGGGATCAATCTAAGGTAGGCTCGGGAGTATTTAACATTTT  50

seq1  TAGGTATGAGCTTGATGTAAACCGCAAGTGAAAACACAAAGATATTATCC  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAGGTATGAGCTTGATGTAAACCGCAAGTGAAAACACAAAGATATTATCC  100

seq1  AATTCAGAAGCATTTCAAAGCAGGGGGAGCCCAAAAAAAGCATCAGTCAA  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATTCAGAAGCATTTCAAAGCAGGGGGAGCCCAAAAAAAGCATCAGTCAA  150

seq1  AGTGAAGTGACAGCTACAGAGAAGAAAAAAATGTGTCCGGTCTGTGCTTC  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTGAAGTGACAGCTACAGAGAAGAAAAAAATGTGTCCGGTCTGTGCTTC  200

seq1  TAAAGGTGGTTACCACCCCAAATAAGTAGCTTGCTTTTAATTAGCAAAAC  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAAAGGTGGTTACCACCCCAAATAAGTAGCTTGCTTTTAATTAGCAAAAC  250

seq1  CTTCAAATAATCTAGTTGAAGTAGGCAACTGTTCTCCAACTGGGACTTGG  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTCAAATAATCTAGTTGAAGTAGGCAACTGTTCTCCAACTGGGACTTGG  300

seq1  GAGAAGATACTCAGCAGTTAAGACCAGTGGCTGCACTTCCAGAGGACTCA  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGAAGATACTCAGCAGTTAAGACCAGTGGCTGCACTTCCAGAGGACTCA  350

seq1  GGTTAGATTCTCAACTACCACATGGTGGCTCACAACCATCTGTAACTCCA  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGTTAGATTCTCAACTACCACATGGTGGCTCACAACCATCTGTAACTCCA  400

seq1  AACCCTGGGGCCTCTGAGGGTATCAAGTACGTGTGTACATGGTGCATTTC  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AACCCTGGGGCCTCTGAGGGTATCAAGTACGTGTGTACATGGTGCATTTC  450

seq1  CCTAGGGTGGGGAATAAGTTGCTAGTACTGGACTACTACAATTCGAGTAC  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTAGGGTGGGGAATAAGTTGCTAGTACTGGACTACTACAATTCGAGTAC  500

seq1  TGAGGCCCCAACCTGCCTTGTTTGCAAATGTAATCAGAAGGGATTGTAAT  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGAGGCCCCAACCTGCCTTGTTTGCAAATGTAATCAGAAGGGATTGTAAT  550

seq1  CACTGCAGGTCTTAACTTTGAGGAGCTGCTCACAAAAACACATTGGAGGA  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CACTGCAGGTCTTAACTTTGAGGAGCTGCTCACAAAAACACATTGGAGGA  600

seq1  TTTTCTATATTGATTAAGCACAGTAATATTAATACATATTTTTTTGCCTC  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTTCTATATTGATTAAGCACAGTAATATTAATACATATTTTTTTGCCTC  650

seq1  CAGTCACTTCTTTCTTCAGAATATTCCCAGCTGGGACTGTGCAAGTTTCT  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGTCACTTCTTTCTTCAGAATATTCCCAGCTGGGACTGTGCAAGTTTCT  700

seq1  CTGATTCTAGCTGAATACTAATGCAGTCAACTTCACGGCGGTGACCATTT  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGATTCTAGCTGAATACTAATGCAGTCAACTTCACGGCGGTGACCATTT  750

seq1  GACCCAGGTCTTTTTTTCCTTTCTCTCCTCTATACCTCCCACCCCCCCCT  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GACCCAGGTCTTTTTTTCCTTTCTCTCCTCTATACCTCCCACCCCCCCCT  800

seq1  CTCTCGGTTTCTCCAGAGAAAATAGCCTTCCAGGTTTCAGCGTGGGGCTC  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCTCGGTTTCTCCAGAGAAAATAGCCTTCCAGGTTTCAGCGTGGGGCTC  850

seq1  ACGTGTCTTCTTGGGTTACCATCGAGGCAGTGACGGATGGTTCACAGTAT  900
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACGTGTCTTCTTGGGTTACCATCGAGGCAGTGACGGATGGTTCACAGTAT  900

seq1  TGCC-TGCCTTGACCTCGTCAACATCAGAAACTGCTCTCAAGTCTCAGTC  949
      |||| |||||||| |||||| ||||||| |||||||||||||||||||||
seq2  TGCCTTGCCTTGATCTCGTC-ACATCAGGAACTGCTCTCAAGTCTCAGTC  949

seq1  A-TCTCTGACAGCCTTTGAGCAGAGAAATGAGACAGT-CTCCC-TGACAC  996
      | ||||||||||| ||||||||||||||||||||||| ||||| ||||||
seq2  ATTCTCTGACAGCTTTTGAGCAGAGAAATGAGACAGTCCTCCCTTGACAC  999

seq1  AAAGGC-TTCTGGCCTGGGGTAAAAAATT-CCTTTTGAAAGAAAAAATTC  1044
      ||| || |||||||||||||||||||||| ||||| ||||||||||||||
seq2  AAATGCTTTCTGGCCTGGGGTAAAAAATTCCCTTTGGAAAGAAAAAATTC  1049

seq1  GAA-CACT-CTACAGACC-ACACTGCTTTTCATTCATCTTGT-AGTC-TG  1089
      ||| |||| ||||||||| ||||||| ||||||||||||||| |||| ||
seq2  GAACCACTCCTACAGACCAACACTGCCTTTCATTCATCTTGTAAGTCTTG  1099

seq1  GCCCATCCATCCCCAGCT-CCACATTAGCTTTC  1121
      |||||  ||| || |||| || |||||||||||
seq2  GCCCAATCATTCCAAGCTCCCCCATTAGCTTTC  1132