MoG+ -Mouse Genome database with high added value-

BAC Information

BAC name
Region	Chromosome -
Gene	search by nearby gene name.
Format	rows / page	Page	1

BAC

Clone Name	B6Ng01-017C09
Chromosome	1 (Build37)
Map Location	3,472,205 - 3,472,879
singlet/doublet	singlet
Overlap gene	Xkr4, LOC100038975
Upstream gene	none
Downstream gene	LOC664792, LOC619785, Rp1h
Link	Open Mouse BAC browser

Click to get alignment info.

name	Xkr4 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:497097 MGI:3528744
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	LOC100038975 (CDS detail)
type	gene
link	vega ensembl
xref	GeneID:100038975
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 1 EST

name	LOC664792 (CDS detail)
type	gene
link	vega ensembl
xref	GeneID:664792
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 1 EST, 2 Proteins pseudo : _no_value

name	LOC619785 (CDS detail)
type	gene
link	vega ensembl
xref	GeneID:619785
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 5 Proteins pseudo : _no_value

name	Rp1h (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:19888 MGI:1341105
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Xkr4 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:59858538 GeneID:497097 MGI:3528744
definition	exception : unclassified transcription discrepancy note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : X Kell blood group precursor related family member 4 transcript_id : NM_001011874.1

name	LOC100038975 (CDS detail)
type	mRNA
link	vega ensembl NCBI
xref	GI:149233582 GeneID:100038975
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 1 EST product : hypothetical protein LOC100038975 transcript_id : XM_001472020.1

name	Rp1h (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:33468922 GeneID:19888 MGI:1341105
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : retinitis pigmentosa 1 homolog (human) transcript_id : NM_011283.1

name	Xkr4 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:59858539 CCDS:CCDS14803.1 GeneID:497097 MGI:3528744
definition	GO_component : GO:0016021 - integral to membrane [Evidence IEA]; GO:0016020 - membrane [Evidence IEA] codon_start : 1 product : XK-related protein 4 protein_id : NP_001011874.1

name	LOC100038975 (CDS detail)
type	CDS
link	vega ensembl NCBI
xref	GI:149233583 GeneID:100038975
definition	codon_start : 1 product : hypothetical protein protein_id : XP_001472070.1

name	Rp1h (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:33468923 CCDS:CCDS14804.1 GeneID:19888 MGI:1341105
definition	GO_component : GO:0005929 - cilium [Evidence IDA]; GO:0005625 - soluble fraction [Evidence IDA] GO_function : GO:0004872 - receptor activity [Evidence IEA] GO_process : GO:0007242 - intracellular signaling cascade [Evidence IEA]; GO:0050896 - response to stimulus [Evidence IEA]; GO:0007601 - visual perception [Evidence IEA] codon_start : 1 note : oxygen-regulated protein 1 product : retinitis pigmentosa 1 homolog protein_id : NP_035413.1

name	LOC619785 (CDS detail)
type	exon
link	vega ensembl
xref	GeneID:619785
definition	number : 5 pseudo : _no_value

name	LOC619785 (CDS detail)
type	exon
link	vega ensembl
xref	GeneID:619785
definition	number : 4 pseudo : _no_value

name	LOC619785 (CDS detail)
type	exon
link	vega ensembl
xref	GeneID:619785
definition	number : 3 pseudo : _no_value

name	LOC619785 (CDS detail)
type	exon
link	vega ensembl
xref	GeneID:619785
definition	number : 2 pseudo : _no_value

name	LOC619785 (CDS detail)
type	exon
link	vega ensembl
xref	GeneID:619785
definition	number : 1 pseudo : _no_value

name	(CDS detail)
type	STS
link
xref	UniSTS:128840
definition	standard_name : D1Mit475

name	(CDS detail)
type	STS
link
xref	UniSTS:125374
definition	standard_name : MHAa84a2.seq

name	(CDS detail)
type	STS
link
xref	UniSTS:128586
definition	standard_name : D1Mit242.1

name	(CDS detail)
type	STS
link
xref	UniSTS:128585
definition	standard_name : D1Mit242

name	(CDS detail)
type	STS
link
xref	UniSTS:158773
definition	standard_name : 36.MMHAP82FRD12.seq

name	(CDS detail)
type	STS
link
xref	UniSTS:270413
definition	standard_name : PMC122834P1

name	LOC664792 (CDS detail)
type	misc_RNA
link	vega ensembl NCBI
xref	GI:149233581 GeneID:664792
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 1 EST, 2 Proteins product : similar to Solute carrier family 35, member E3 pseudo : _no_value transcript_id : XR_030515.1

clone name	MSMg01-147H05
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-389J19
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-354D11
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-192O10
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-427A09
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-466J16
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-293D22
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-198H12
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-199I16
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-487J11
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-301C01
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-544N17
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-378O02
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-345B19
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-546C18
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-412K08
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-513O20
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-521C13
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-191H01
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-521A17
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-408D20
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-522J22
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-346H06
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-260M08
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-367K10
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-103B17
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-103A07
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-108G16
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-316G02
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-432C07
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-129G01
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-101B16
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-098N17
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-441I13
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-133K23
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-108G09
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-105M15
singlet/doublet	singlet
plural/unique	plural

clone name	MSMg01-300N22
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-447I19
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-447I21
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-548C10
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-372A13
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-410I22
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-521O16
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-441G16
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-346G11
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-279P11
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-113M15
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-373J17
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-147J24
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-280A06
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-541P22
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-179O14
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-191O15
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-285A04
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-100K21
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-203D22
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-024I07
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-026M10
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-067K19
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-099I09
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-158L04
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-185N02
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-319G15
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-025M06
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-296H18
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-186C05
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-106B02
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-202I10
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-260D03
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-260O07
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-082N01
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-236L21
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-101E15
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-174K04
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-264L06
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-213L07
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-161P22
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-008B08
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-324C12
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-017C09
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-029L23
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-285O20
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-226G09
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-267E18
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-236B20
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-045L11
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-295L08
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-210C19
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-310M05
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-133A07
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-257L11
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-134F22
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-281K07
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-241N18
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-341O04
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-086L24
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-008I17
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-041G20
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-076B05
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-087G15
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-042E10
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-097F02
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-056M07
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-246O12
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-268H03
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-042F17
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-349F14
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-117E23
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-139O18
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-114F10
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-015I04
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-197A09
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-086I19
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-254C24
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-227N21
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-229M06
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-263I11
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-061D04
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-293G11
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-138K13
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-211A18
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-203B20
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-194K14
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-231L24
singlet/doublet	singlet
plural/unique	unique

BAC End Information

BAC end	BAC-end 1	BAC-end 2
end name	B6Ng01-017C09.b	B6Ng01-017C09.g
ACC	DH850912	DH850913
length	678	628
definition	DH850912\|Mus musculus domesticus DNA, BAC clone: B6Ng01-017C09, 5' end.	DH850913\|Mus musculus domesticus DNA, BAC clone: B6Ng01-017C09, 3' end.
singlet/doublet	singlet	---
BLAST hit	unique	no hit data
sequence	gaattcagagagataagcctaattaacacatggtatctcttgtgggagac tcaaggtgataatcaccaggttgtgacaacagtgtatgatcaatgcccca gtaaaactgggtcaaatacagtgaggcatgtcatgagaaaatgactaatt ctttcaggacaattggtggggggagggctgagactttcatctgccactca gtgaatgattagaaagttgcagagcagctaagacctcagcacagatgaaa tagagaagccaaatgctgagagaaggggggacatatacctgtagttccaa ctactcagggtctgaggtaggatgattgatataatgcaggagttctagac tagcctgggaagtttgataagtccatatgtcagaaggaagcaatgaagga aagaaggaaggaaagaggagtggaaggaaggaaggaaagaaagaaagaaa gaaagaggagataaaaatacaggaaagaacagctgaatcattcaaggtaa cgggtaggaacctcaaacttcaatgagtgagttcatccatgaaatctgaa gggctcaactggcctaaacatgatgctactggtactgacctccccacttt ctttagattcattttatttgaccattttccttatttctgaggctaattta ctaaagtcacggcaacttctcattcctg	gaattctcagtttagttctataccccattttttgatttggttgtttggtt tttggtgattatcttcttgagttcttccataattgttcctgtctgaaaga attacagggatggaaaagaaggtctgaggaaaagaaggtccagagagtgg gatccagctcaaggggaggtcccaagtcctgacactattactgaggttat ggagaattcacaaaaagtcacctatcatgacggcactccaaaagacccaa caggcagctgaaagagtcacatgcagatattttcccccaaccaatggaca gaagcagctgacccctttttgttgaattagggaaggctgaaagaagctga ggagaagggtgatcctgtaggaggacaagcagtctcaattaatctggacc ctgagatctctcaaacactggaccaccaaacagacaacatccaccagctg atatgagcctctacaacacacatacagtagatgaattctgggtctacatt cattcagagatgatgcacctaaccctcaagagactggaggccccagggag tttagaggtctggtgaggtgaaggatggggacatccatgtggagacaggg aggtaaggagaaagatgtgggatgtgtt
quality values	Open. Hide. 47 41 20 52 53 27 13 16 47 50 61 61 23 24 53 47 47 61 61 61 61 61 61 61 61 61 38 38 49 38 52 44 36 33 36 61 61 61 61 61 61 61 61 61 61 61 61 61 59 59 61 61 59 59 61 61 61 61 59 61 61 61 61 59 61 61 61 61 61 61 61 61 55 55 55 44 61 59 61 61 61 61 61 61 61 61 59 61 61 61 61 59 61 61 61 61 61 61 61 61 61 59 61 61 61 61 61 61 61 59 61 61 61 61 61 61 61 61 61 59 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 55 55 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 59 61 61 61 59 61 61 59 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 44 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 59 59 59 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 59 59 61 59 59 59 59 61 61 61 61 61 61 61 61 61 61 59 59 61 61 61 61 61 61 59 61 61 61 61 61 59 52 61 61 61 61 61 61 61 59 61 61 61 61 61 61 59 61 59 61 61 61 61 61 59 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 59 59 61 59 59 61 61 59 61 61 61 61 61 61 61 61 61 61 59 59 61 61 61 61 61 61 61 61 61 59 61 61 61 59 59 52 61 61 59 61 61 61 61 61 59 61 61 59 59 43 59 59 59 61 59 61 61 61 61 61 61 61 61 61 61 61 59 59 61 59 61 59 61 61 61 61 59 61 59 52 61 59 52 61 59 59 52 59 52 59 59 59 59 59 52 61 61 61 61 61 61 61 61 61 61 61 59 61 61 61 61 59 61 52 59 59 52 59 61 59 59 59 59 61 59 59 52 59 59 61 59 61 59 59 59 41 27 27 12 18 27 25 49 39 37 27 23 20 36 30 49 36 59 37 61 52 23 40 45 38 36 37 24 19 10 12 27 12 20 38 59 36 59 43 59 43 49 27 20 30 28 35 43 36 49 49 36 41 52 59 43 37 52 61 36 49 43 52 43 49 52 43 43 19 43 49 35 37 36 36 32 13 14 19 30 52 52 38 30 16 16 36 19 11 18 37 41 27 43 27 30 28 30 26 21 11 30 37 37 28 36 36 34 24 34 35 19 14 41 49 17 13 19 11 12 14 27 32 27 24 37 24 55 41 23 22 11 22 32 31 37 50 50 39 24 34 14 38 33 18 32 37 37 31 31 23 31 29 37 29 29 29 26 24 50 50 50 49 29 35 13 24 18 43 36 20 36 35 35 43 45 39 45 53 50 31 18 21 10 12 10 31 15 33 18 18 26 9 31 43 15 19 8 10 21 16 27 7 10 11 24 16 29 27 13 20 14 25 35 33 20 32 12 10 14 8 15 12 20 8 13 33 45 43 50 27 27 23 12 30 31 19 10 8 7	Open. Hide. 55 47 55 47 61 61 49 38 37 28 52 52 61 49 49 61 61 61 61 61 61 61 61 61 61 61 59 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 59 61 61 61 61 61 59 59 59 61 61 59 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 59 61 59 59 59 61 61 61 61 61 61 61 61 59 59 61 61 61 55 55 59 59 61 59 61 61 61 59 61 61 59 59 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 59 61 52 59 59 59 61 61 61 61 61 59 61 59 59 61 59 52 61 61 61 61 61 61 61 61 61 61 61 61 59 59 61 61 61 59 59 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 59 61 59 61 61 61 59 59 59 59 59 61 61 61 61 61 61 61 61 59 61 61 59 61 61 61 61 61 59 59 59 59 61 61 59 61 61 61 61 61 61 61 61 61 59 59 59 61 61 59 61 61 61 61 61 61 59 59 59 59 61 61 59 61 61 59 59 59 59 59 59 59 61 52 59 49 59 59 59 61 59 59 59 61 59 59 59 59 59 59 61 61 59 59 59 61 61 61 61 61 61 61 59 59 59 59 59 52 59 61 61 59 61 61 61 59 61 59 59 59 61 61 59 61 59 59 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 59 55 59 61 61 59 61 59 61 61 61 61 61 59 61 33 19 27 20 30 49 45 59 61 49 61 61 59 59 61 61 61 59 59 52 52 52 59 59 49 49 59 61 52 61 61 59 59 61 59 61 59 59 59 61 61 59 59 59 59 59 59 59 59 59 59 59 61 59 52 49 52 52 59 59 33 37 59 59 61 59 59 59 59 59 59 59 49 41 52 55 61 61 49 40 32 43 49 36 52 52 52 49 43 55 61 61 61 61 52 61 55 55 52 55 55 52 55 61 49 55 55 52 52 52 55 55 52 52 52 52 52 61 55 61 55 52 52 52 52 49 52 61 61 61 61 55 55 52 61 52 61 61 55 61 61 61 61 61 50 55 55 55 39 50 55 55 55 50 50 43 49 37 43 55 61 49 50 55 49 47 50 50 55 50 50 49 37 43 49 43 37 43 35 43 49 50 50 43 50 49 61 43 55 50 50 55 35 50 43 36 24 28 26 25 19 18 55 61 61 55 55 61 61 61 50 61 14 22 8 10 14 25 50 35 43 61 16 43 23 43 50 43 35 52 61 50 47 50 50 31 37 43 35 35 35 43 21 32 21 14 10 9 17 12 35 35 22 21 35 27 20 15 27 9 10 19 7 24 33 20 24 18 15 13 39 28 24 10 7 8 10 21 15 12 13 14 19 12

Alignment Information

BAC End 1

BAC End 2

seq1: chr1_3472205_3472879
seq2: B6Ng01-017C09.b_48_725

seq1  GAATTCAGAGAGATAAGCCTAATTAACACATGGTATCTCTTGTGGGAGAC  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCAGAGAGATAAGCCTAATTAACACATGGTATCTCTTGTGGGAGAC  50

seq1  TCAAGGTGATAATCACCAGGTTGTGACAACAGTGTATGATCAATGCCCCA  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCAAGGTGATAATCACCAGGTTGTGACAACAGTGTATGATCAATGCCCCA  100

seq1  GTAAAACTGGGTCAAATACAGTGAGGCATGTCATGAGAAAATGACTAATT  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTAAAACTGGGTCAAATACAGTGAGGCATGTCATGAGAAAATGACTAATT  150

seq1  CTTTCAGGACAATTGGTGGGGGGAGGGCTGAGACTTTCATCTGCCACTCA  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTTCAGGACAATTGGTGGGGGGAGGGCTGAGACTTTCATCTGCCACTCA  200

seq1  GTGAATGATTAGAAAGTTGCAGAGCAGCTAAGACCTCAGCACAGATGAAA  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTGAATGATTAGAAAGTTGCAGAGCAGCTAAGACCTCAGCACAGATGAAA  250

seq1  TAGAGAAGCCAAATGCTGAGAGAAGGGGGGACATATACCTGTAGTTCCAA  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAGAGAAGCCAAATGCTGAGAGAAGGGGGGACATATACCTGTAGTTCCAA  300

seq1  CTACTCAGGGTCTGAGGTAGGATGATTGATATAATGCAGGAGTTCTAGAC  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTACTCAGGGTCTGAGGTAGGATGATTGATATAATGCAGGAGTTCTAGAC  350

seq1  TAGCCTGGGAAGTTTGATAAGTCCATATGTCAGAAGGAAGCAATGAAGGA  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAGCCTGGGAAGTTTGATAAGTCCATATGTCAGAAGGAAGCAATGAAGGA  400

seq1  AAGAAGGAAGGAAAGAGGAGTGGAAGGAAGGAAGGAAAGAAAGAAAGAAA  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGAAGGAAGGAAAGAGGAGTGGAAGGAAGGAAGGAAAGAAAGAAAGAAA  450

seq1  GAAAGAGGAGATAAAAATACAGGAAAGAACAGCTGAATCATTCAAGGTAA  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAAAGAGGAGATAAAAATACAGGAAAGAACAGCTGAATCATTCAAGGTAA  500

seq1  CGGGTAGGAACCTCAAACTTCAATGAGTGAGTTCATCCATGAAATCTGAA  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CGGGTAGGAACCTCAAACTTCAATGAGTGAGTTCATCCATGAAATCTGAA  550

seq1  GGGCTCAACTGGCCTAAACATGATGCTACTGGTACTGACCTCCCCACTTT  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGGCTCAACTGGCCTAAACATGATGCTACTGGTACTGACCTCCCCACTTT  600

seq1  CTTTAGATTCA-TTTATTTGACCA-TTTCCTTATTTCTGAGGCTAA-TTA  647
      ||||||||||| |||||||||||| ||||||||||||||||||||| |||
seq2  CTTTAGATTCATTTTATTTGACCATTTTCCTTATTTCTGAGGCTAATTTA  650

seq1  CTAAAGTCACGGCAACTTCTCATTCCTG  675
      ||||||||||||||||||||||||||||
seq2  CTAAAGTCACGGCAACTTCTCATTCCTG  678

BAC Information

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BAC

BAC End Information

Alignment Information