BAC Information

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BAC

Clone NameB6Ng01-017C12
Chromosome1 (Build37)
Map Location 132,261,016 - 132,445,743
singlet/doubletdoublet
Overlap geneDaf2, Cd55
Upstream geneThsd7b, LOC100042745, LOC100042740
Downstream geneZp3r, C4bp, C4bp-ps1, Pfkfb2, Yod1, AA986860, Fcamr, Pigr, Faim3, Il24, Il20, Il19, Il10, Mapkapk2, Dyrk3, Lgtn, Rassf5, Ikbke, Srgap2, LOC100042826, LOC100042821, 2700049P18Rik
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-017C12.bB6Ng01-017C12.g
ACCDH850918DH850919
length949897
definitionDH850918|Mus musculus domesticus DNA, BAC clone: B6Ng01-017C12, 5' end.DH850919|Mus musculus domesticus DNA, BAC clone: B6Ng01-017C12, 3' end.
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(132,444,798 - 132,445,743)(132,261,016 - 132,261,912)
sequence
gaattcaatgaaatgagggaagaaggaaagggaacagtaaagaaaacaga
tgaaatacaaggaaaaaagaagagagcaaagttttggaaagagaaagcag
aaagtttcaaaatatttttaaaaacgaaagacaaaaacaataactagatt
gttttagtgcaaaattaagacaattaaaaaaaaacacaagacagagaaag
aaagaaagaaagaaagaaagaaagaaaggagagaaaagaaaaaagaaaag
aaaagaagagaaaggaaggaagaaaggatgggctggagagattgctcagc
ggttaagaacattgactgctcttccagagatcctgagttcaattcccagc
aaccacatggtggctaacaaccatctgtgatgagattggatgacctcttc
tggtgtgtctgaagacagctacagtgagtgtacttatatataataaatat
ataaatcgagagagagagagagagagagagagagagagagagagagagag
aagaaagaaagaaagaaagaaagaaagaaagaaagaaagaaagaaagaaa
gaaagaaagaaagaaagaaagaaagaaaatccagtaaggtaacttcaaaa
agttacaaaagtatagtagagactaaaagtggaaaccaggcactaaagga
cttcccagcagagaaaagatacataaacaaacttaaatggatgcgtggcc
tagcaaaacgaaagcacagaagggctgtaagtacgttaaaatgaaaatac
tacctaaaaagccgaaacatgggaagggaagagaaaaacttgacgtgtga
gagaggcacttttttgggtttgaaaccgggctactgttgtgctatatcgc
gagggagtggggtaaatgaactcaagatttcccacggtttacacgggatg
ccgaatttgtatggggcttttcggtgttacctgggggagggcggtgggg
gaattcaattggtacagtgtttgcctagcataggtgaggtcttgggttct
agccacaacaccatgtaatcagttatagaacattcctgtaatcccagtac
tgggaattggaagctagaggatcaggtcaggccaacccgagttacataag
accctgcctcatgaatggacaagaagagacagtcaaatgatggtgaccag
aggctagagacagaagtaggcagccatatggagatgtggtcaggataaaa
tggcaccgacctacatgactggtacagcagcattgaggttcgataggaag
agcaagattttgctacctactgaaatacttctttagatttacttattttc
aattttatgagtatgatgtcttgcctgcacacatgtatgtgcaccaagtg
ggtgtctgttagatggatcccctggaaatggggttataggtcattgcaag
ccaccatatgggttgtaggaatcgaatcccagacctctgtaagagaatct
agtgctcttaaggactgagctatcttcgcagtccctgaaaaacattttaa
ctccagttattaacaatgtgtcatatagttcaaaatgatgaagagagtaa
ttttaaacatcttctttgcaaaaattgataagtatttaagtatttgagga
gattaatatgttaattagttcaatttaatcatccttgattatatctgtat
atcaaaacatcacagtgttagacttaaaatcttagaggctttctgattta
tctcaagatatctagatactgtagatatgctgtacagaaagaaacactgg
aaaaaagtaactagaggtcacaccttacatgtttagaatactgaattaaa
tgaaatatctaaaagtgactgggaaataaataaaaacagcagttggt
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr1_132444798_132445743
seq2: B6Ng01-017C12.b_49_997 (reverse)

seq1  CCCCACCCGCCTCCCCCAGGTAACACCGAAAAGCCCCATACAACTTCGGC  50
      |||||||  |||||||||||||||||||||||||||||||||| ||||||
seq2  CCCCACCGCCCTCCCCCAGGTAACACCGAAAAGCCCCATACAAATTCGGC  50

seq1  AT-CCGTGTAAACCGTGGGAAATCCTGAGTTCCTTTACCCCACT-CCTCG  98
      || ||||||||||||||||||||| ||||||| ||||||||||| |||||
seq2  ATCCCGTGTAAACCGTGGGAAATCTTGAGTTCATTTACCCCACTCCCTCG  100

seq1  CGATATAGCACAACAGTAGCCCGGTTTCAAACCC-AAAAAGTGCCTCTCT  147
      |||||||||||||||||||||||||||||||||| |||||||||||||||
seq2  CGATATAGCACAACAGTAGCCCGGTTTCAAACCCAAAAAAGTGCCTCTCT  150

seq1  CACACGTCAAGTTTTTCTCTTCCCTTCCCATGTTTCGGCTTTTTAGGTAG  197
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CACACGTCAAGTTTTTCTCTTCCCTTCCCATGTTTCGGCTTTTTAGGTAG  200

seq1  TATTTTCATTTTAACGTACTTACAGCCCTTCTGTGCTTTCGTTTTGCTAG  247
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATTTTCATTTTAACGTACTTACAGCCCTTCTGTGCTTTCGTTTTGCTAG  250

seq1  GCCACGCATCCATTTAAGTTTGTTTATGTATCTTTTCTCTGCTGGGAAGT  297
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCCACGCATCCATTTAAGTTTGTTTATGTATCTTTTCTCTGCTGGGAAGT  300

seq1  CCTTTAGTGCCTGGTTTCCACTTTTAGTCTCTACTATACTTTTGTAACTT  347
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTTTAGTGCCTGGTTTCCACTTTTAGTCTCTACTATACTTTTGTAACTT  350

seq1  TTTGAAGTTACCTTACTGGATTTTCTTTCTTTCTTTCTTTCTTTCTTTCT  397
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTGAAGTTACCTTACTGGATTTTCTTTCTTTCTTTCTTTCTTTCTTTCT  400

seq1  TTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTC  447
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTC  450

seq1  TCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCGATTTATA  497
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCGATTTATA  500

seq1  TATTTATTATATATAAGTACACTCACTGTAGCTGTCTTCAGACACACCAG  547
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATTTATTATATATAAGTACACTCACTGTAGCTGTCTTCAGACACACCAG  550

seq1  AAGAGGTCATCCAATCTCATCACAGATGGTTGTTAGCCACCATGTGGTTG  597
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGAGGTCATCCAATCTCATCACAGATGGTTGTTAGCCACCATGTGGTTG  600

seq1  CTGGGAATTGAACTCAGGATCTCTGGAAGAGCAGTCAATGTTCTTAACCG  647
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGGGAATTGAACTCAGGATCTCTGGAAGAGCAGTCAATGTTCTTAACCG  650

seq1  CTGAGCAATCTCTCCAGCCCATCCTTTCTTCCTTCCTTTCTCTTCTTTTC  697
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGAGCAATCTCTCCAGCCCATCCTTTCTTCCTTCCTTTCTCTTCTTTTC  700

seq1  TTTTCTTTTTTCTTTTCTCTCCTTTCTTTCTTTCTTTCTTTCTTTCTTTC  747
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTTCTTTTTTCTTTTCTCTCCTTTCTTTCTTTCTTTCTTTCTTTCTTTC  750

seq1  TTTCTCTGTCTTGTGTTTTTTTTTAATTGTCTTAATTTTGCACTAAAACA  797
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTCTCTGTCTTGTGTTTTTTTTTAATTGTCTTAATTTTGCACTAAAACA  800

seq1  ATCTAGTTATTGTTTTTGTCTTTCGTTTTTAAAAATATTTTGAAACTTTC  847
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATCTAGTTATTGTTTTTGTCTTTCGTTTTTAAAAATATTTTGAAACTTTC  850

seq1  TGCTTTCTCTTTCCAAAACTTTGCTCTCTTCTTTTTTCCTTGTATTTCAT  897
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGCTTTCTCTTTCCAAAACTTTGCTCTCTTCTTTTTTCCTTGTATTTCAT  900

seq1  CTGTTTTCTTTACTGTTCCCTTTCCTTCTTCCCTCATTTCATTGAATTC  946
      |||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGTTTTCTTTACTGTTCCCTTTCCTTCTTCCCTCATTTCATTGAATTC  949

seq1: chr1_132261016_132261912
seq2: B6Ng01-017C12.g_68_964

seq1  GAATTCAATTGGTACAGTGTTTGCCTAGCATAGGTGAGGTCTTGGGTTCT  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCAATTGGTACAGTGTTTGCCTAGCATAGGTGAGGTCTTGGGTTCT  50

seq1  AGCCACAACACCATGTAATCAGTTATAGAACATTCCTGTAATCCCAGTAC  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGCCACAACACCATGTAATCAGTTATAGAACATTCCTGTAATCCCAGTAC  100

seq1  TGGGAATTGGAAGCTAGAGGATCAGGTCAGGCCAACCCGAGTTACATAAG  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGGAATTGGAAGCTAGAGGATCAGGTCAGGCCAACCCGAGTTACATAAG  150

seq1  ACCCTGCCTCATGAATGGACAAGAAGAGACAGTCAAATGATGGTGACCAG  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACCCTGCCTCATGAATGGACAAGAAGAGACAGTCAAATGATGGTGACCAG  200

seq1  AGGCTAGAGACAGAAGTAGGCAGCCATATGGAGATGTGGTCAGGATAAAA  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGCTAGAGACAGAAGTAGGCAGCCATATGGAGATGTGGTCAGGATAAAA  250

seq1  TGGCACCGACCTACATGACTGGTACAGCAGCATTGAGGTTCGATAGGAAG  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGCACCGACCTACATGACTGGTACAGCAGCATTGAGGTTCGATAGGAAG  300

seq1  AGCAAGATTTTGCTACCTACTGAAATACTTCTTTAGATTTACTTATTTTC  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGCAAGATTTTGCTACCTACTGAAATACTTCTTTAGATTTACTTATTTTC  350

seq1  AATTTTATGAGTATGATGTCTTGCCTGCACACATGTATGTGCACCAAGTG  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATTTTATGAGTATGATGTCTTGCCTGCACACATGTATGTGCACCAAGTG  400

seq1  GGTGTCTGTTAGATGGATCCCCTGGAAATGGGGTTATAGGTCATTGCAAG  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGTGTCTGTTAGATGGATCCCCTGGAAATGGGGTTATAGGTCATTGCAAG  450

seq1  CCACCATATGGGTTGTAGGAATCGAATCCCAGACCTCTGTAAGAGAATCT  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCACCATATGGGTTGTAGGAATCGAATCCCAGACCTCTGTAAGAGAATCT  500

seq1  AGTGCTCTTAAGGACTGAGCTATCTTCGCAGTCCCTGAAAAACATTTTAA  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTGCTCTTAAGGACTGAGCTATCTTCGCAGTCCCTGAAAAACATTTTAA  550

seq1  CTCCAGTTATTAACAATGTGTCATATAGTTCAAAATGATGAAGAGAGTAA  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCCAGTTATTAACAATGTGTCATATAGTTCAAAATGATGAAGAGAGTAA  600

seq1  TTTTAAACATCTTCTTTGCAAAAATTGATAAGTATTTAAGTATTTGAGGA  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTTAAACATCTTCTTTGCAAAAATTGATAAGTATTTAAGTATTTGAGGA  650

seq1  GATTAATATGTTAATTAGTTCAATTTAATCATCCTTGATTATATCTGTAT  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GATTAATATGTTAATTAGTTCAATTTAATCATCCTTGATTATATCTGTAT  700

seq1  ATCAAAACATCACAGTGTTAGACTTAAAATCTTAGAGGC-TTCTGATTTA  749
      ||||||||||||||||||||||||||||||||||||||| ||||||||||
seq2  ATCAAAACATCACAGTGTTAGACTTAAAATCTTAGAGGCTTTCTGATTTA  750

seq1  TCTCAAGATATCTAGATACTGTAGATATGCTGTACAGAAAGAAACACTGG  799
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTCAAGATATCTAGATACTGTAGATATGCTGTACAGAAAGAAACACTGG  800

seq1  AAAAAAGTAACTAGAGGTCACACCTTACATGTTTAGAATACTGAATTAAA  849
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAAAAGTAACTAGAGGTCACACCTTACATGTTTAGAATACTGAATTAAA  850

seq1  TGAAATATCTTAAAAGTGACTGGAAATAAAATAAAAACAGCAGTAGGT  897
      ||||||||| ||||||||||||| ||  |||||||||||||||| |||
seq2  TGAAATATC-TAAAAGTGACTGGGAAATAAATAAAAACAGCAGTTGGT  897