BAC Information

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BAC

Clone NameB6Ng01-019A01
Chromosome1 (Build37)
Map Location 128,179,987 - 128,180,542
singlet/doubletsinglet
Overlap geneE030049G20Rik
Upstream geneActr3, Slc35f5, Lypd1
Downstream geneLOC383559, Mgat5, LOC667090
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-019A01.b
ACCDH852226
length551
definitionDH852226|Mus musculus domesticus DNA, BAC clone: B6Ng01-019A01, 5' end.
singlet/doubletsinglet---
BLAST hituniqueno hit data
sequence
tagcccagcctctcttctggagtggaagccttgtagaaatcccttgtaca
cagttcccctccctggagaaagtgaactttggatgaaggatgccagagtc
aagctgcttaaggtcatatcctagacctgctccttcccagtctgccccca
ctttgaaatccttacttaaactttcccagatgattcgtgtaattgttgag
agcccagggagtggtatacataaaattaaaagtcactacatgtgaaacac
ctagaatataggacctggaatatagggctcattttgtgaaagtattccta
atggaacatgtgacagtttctctgttagccaaaaagttctgaaagtcagt
ttttggttttcctcttatctttcctttttttttgctccatgctaaggttt
tggttttgtgttgattttcccccgtctgcccctcacctccataccccttt
ctaaagcttgtctttgccacagcctccagcagaacattaacaattttctg
acatcctgaacacacagaaacaagctaatattcctggtccctcacctatt
c
quality valuesOpen.




Alignment Information

BAC End 1BAC End 2
seq1: chr1_128179987_128180542
seq2: B6Ng01-019A01.b_45_601 (reverse)

seq1  GAATAGGTGAGGGACCAGGAATATTAGCTTGTTTCTGTGTGTTCAGGATG  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATAGGTGAGGGACCAGGAATATTAGCTTGTTTCTGTGTGTTCAGGATG  50

seq1  TCAGAAAATTGTTAATGTTCTGCTGGAGGCTGTGGCAAAGACAAGCTTTA  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCAGAAAATTGTTAATGTTCTGCTGGAGGCTGTGGCAAAGACAAGCTTTA  100

seq1  GAAAGGGGTATGGAGGTGAGGGGCAGACCTGGGAAAATCAATACTCTACC  150
      ||||||||||||||||||||||||||||  ||||||||||| ||   |||
seq2  GAAAGGGGTATGGAGGTGAGGGGCAGACGGGGGAAAATCAACACAAAACC  150

seq1  AAAACCTTAGCATGGAGC-TGACCCAAGGAAAGATAAGAGGAAAACCAAA  199
      ||||||||||||||||||   |   |||||||||||||||||||||||||
seq2  AAAACCTTAGCATGGAGCAAAAAAAAAGGAAAGATAAGAGGAAAACCAAA  200

seq1  AACTGACTTTCAGAACTTTTTGGCTAACAGAGAAACTGTCACATGTTCCA  249
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AACTGACTTTCAGAACTTTTTGGCTAACAGAGAAACTGTCACATGTTCCA  250

seq1  TTAGGAATACTTTCACAAAATGAGCCCTATATTCCAGGTCCTATATTCTA  299
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTAGGAATACTTTCACAAAATGAGCCCTATATTCCAGGTCCTATATTCTA  300

seq1  GGTGTTTCACATGTAGTGACTTTTAATTTTATGTATACCACTCCCTGGGC  349
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGTGTTTCACATGTAGTGACTTTTAATTTTATGTATACCACTCCCTGGGC  350

seq1  TCTCAACAATTACACGAATCATCTGGGAAAGTTTAAGTAAGGATTTCAAA  399
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTCAACAATTACACGAATCATCTGGGAAAGTTTAAGTAAGGATTTCAAA  400

seq1  GT-CACGCAGACTGGGAAGGAGCAGGTCTAGGATATGACCTTAAGCAGCT  448
      ||    ||||||||||||||||||||||||||||||||||||||||||||
seq2  GTGGGGGCAGACTGGGAAGGAGCAGGTCTAGGATATGACCTTAAGCAGCT  450

seq1  TGACTCTGGCATCCTTCATCCAAAGTTCACTGTTCTCCAGGGAGGGGAAC  498
      ||||||||||||||||||||||||||||||| ||||||||||||||||||
seq2  TGACTCTGGCATCCTTCATCCAAAGTTCACT-TTCTCCAGGGAGGGGAAC  499

seq1  TGTGTACAAGGGATTTCTACAAGGCTTCCACTCCAGAAGAGAGGCTGGGC  548
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTGTACAAGGGATTTCTACAAGGCTTCCACTCCAGAAGAGAGGCTGGGC  549

seq1  TAGAATTC  556
      ||||||||
seq2  TAGAATTC  557