BAC Information

Click to search

BAC

Clone NameB6Ng01-019D10
Chromosome1 (Build37)
Map Location 139,538,474 - 139,539,588
singlet/doubletsinglet
Overlap genenone
Upstream geneLOC667686, EG623818, Nr5a2, Rnu7-ps3, LOC100042567
Downstream geneLOC100043143, Ptprc, LOC100042596, Atp6v1g3, LOC100042600, Nek7
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-019D10.bB6Ng01-019D10.g
ACCDH852372DH852373
length1,1031,157
definitionDH852372|Mus musculus domesticus DNA, BAC clone: B6Ng01-019D10, 5' end.DH852373|Mus musculus domesticus DNA, BAC clone: B6Ng01-019D10, 3' end.
singlet/doubletsinglet---
BLAST hituniqueno hit data
sequence
gaattcctatatccactcattggtcaagaaaatactccccaaagacttgc
ctatatgcaatctgatgaagcagtttcttagttgagggtccctctttcca
gatggctctagcttgtgtcaagttgagaaaaatacttagtagcacaggcg
gctgctcgcatttaatgggcagagtccagtgatgctaccaaactattcat
ggcaaagaccagtctgtcctcaagtgtcagtagtgttgaggtctaggtac
cctacttcagatctgaatgaccacacctttgttcattgaagatagcttct
tcatgaagggtttgttttttagcagagactcagaatcatcttgatacaag
gatacatacatacaagattcctaacaaattataacagaagagaattacca
tttaaagattgtttatctggaatgatatcagaaaagagtgcttttcctgg
tcttccttcttataataataataatacttgtaatactacatataataaca
tactcaaacatgtcaacagtatgatggcaaaaatgatgggaatgaaaaaa
aagaaaaggaaggacatgtcagctaggtctatctgcaggagctagtctag
tcaatccactgtctcatcaaatactgttagacccttacccatattgtgtt
tgaagttctcgaagcatcttaagagaaaagaggcaagtcggaacacaatg
aaacagcagttccattgctttgatcgaaagcaaaatgaagcctggaacta
aatttcgatttccacaagatccacccaaaccatagatattccttctgatc
ttatgatttctccttccaggtaagacacacgagaatcaggcagtattttg
acagtgaaggccatgaatcttagaaattaagagcatgtctttgacagtac
caatgcagaacaagcaagaaatattggaagttgttttttaataagttggc
aaatgatcattttatgtaaatatcataggagtcacacagtaaaaagttta
tttttttttaaaaatctatgactatcttattacagcccataaaggacata
aataagacccatgttcaaatctgtgccatgataatttcatctttcctgac
tga
gaattctcacctgaggaataccgaatggcagagaagcacctgaaaaaatg
ctcaacatccttaatcatcagggaaatgcaaatcaaaacaaccctgagat
tccacctcacaccagtcagaatggctaagatcaaaaattcaggtgacagc
agatgctggtgtggatgtggagaaagaggaacactcctccattgttggtg
ggattgcaggcttgtacaaccactctggaaatcagtctggccgttcctca
gaaaactggatatagtactaccggaggatccagcaatacctctcctgggc
atatatcccaagatgccccaactggtaagaaggacacatgctccactatg
ttcatagcagccttatttataatagccagaagctggaaggaacccagaag
cccctcaacagaggaatggatacagaaaatgtggtacatctacacaatgg
agtactactcagctattaaaaagaatgaattcatgaaattcctaggcaaa
tggatggacctggagggcatcatcctgagtgaggtaacacattcacaaag
gaactcacacaatatgtactcactgataagtggatattagcccaaaacct
tggatatccaagatataagatacaatttcctaaacacatgaaactcaaga
aaaatgaagactgaagtgtggacactatgcccctccttagaagtgggaac
aaaatacccttggaaggaggtcagagacaaagtttggagctgagataaaa
agatggaccatgcagagactgccatatccggggatccatcccataatcag
cttccaaatgctgacaccattgcatacactagcaagattatgctgaaagg
accctgatatagctgtctcttgtcagagtatgcctgggcctagcaaacat
agaagtggatgctcacagtcggctattggatggatcacatggccccaatg
agagctagagaagtacccagagctaaaggatctgcaaccctataggtgga
cacattatgactaccagtacccggagctctgactctacctgcaatgttca
aaggatggccaaggcgtccatccctggaaaggaggccattggaactcaac
tttatggctctcatacaggaacgccaggccctatggggatgggtgggtgt
gggggac
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr1_139538474_139539588
seq2: B6Ng01-019D10.b_47_1149 (reverse)

seq1  TCAGTCAGGAAAGATGAAATTATTCATGGCACAGATTTGAACATGGGTCT  50
      |||||||||||||||||||||| |||||||||||||||||||||||||||
seq2  TCAGTCAGGAAAGATGAAATTA-TCATGGCACAGATTTGAACATGGGTCT  49

seq1  TATTTATGTTCTTTTATTGGGCTGTATTAAGATAGTCAATAGATTTTTTT  100
      ||||||||| ||||   ||||||||| |||||||||| |||||  |||||
seq2  TATTTATGTCCTTT--ATGGGCTGTAATAAGATAGTC-ATAGA--TTTTT  94

seq1  AAAAAAAAATAAAACTTTTTTACTGTGTGACTCCTATTGAATTATTTACA  150
      |||||||||||||   |||||||||||||||||||| |||  ||||||||
seq2  AAAAAAAAATAAA--CTTTTTACTGTGTGACTCCTA-TGA--TATTTACA  139

seq1  TAAAAATGATCATTTGCCAACTTATTAAAAAACAACTTCCAATATTTCTT  200
      | ||||||||||||||||||||||||||||||||||||||||||||||||
seq2  T-AAAATGATCATTTGCCAACTTATTAAAAAACAACTTCCAATATTTCTT  188

seq1  GCTTGTTCTGCATTGGTACTGTCAAAGACATGCTCTTAATTTCTAAGATT  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCTTGTTCTGCATTGGTACTGTCAAAGACATGCTCTTAATTTCTAAGATT  238

seq1  CATGGCCTTCACTGTCAAAATACTGCCTGATTCTCGTGTGTCTTACCTGG  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATGGCCTTCACTGTCAAAATACTGCCTGATTCTCGTGTGTCTTACCTGG  288

seq1  AAGGAGAAATCATAAGATCAGAAGGAATATCTATGGTTTGGGTGGATCTT  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGGAGAAATCATAAGATCAGAAGGAATATCTATGGTTTGGGTGGATCTT  338

seq1  GTGGAAATCGAAATTTAGTTCCAGGCTTCATTTTGCTTTCGATCAAAGCA  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTGGAAATCGAAATTTAGTTCCAGGCTTCATTTTGCTTTCGATCAAAGCA  388

seq1  ATGGAACTGCTGTTTCATTGTGTTCCGACTTGCCTCTTTTCTCTTAAGAT  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGGAACTGCTGTTTCATTGTGTTCCGACTTGCCTCTTTTCTCTTAAGAT  438

seq1  GCTTCGAGAACTTCAAACACAATATGGGTAAGGGTCTAACAGTATTTGAT  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCTTCGAGAACTTCAAACACAATATGGGTAAGGGTCTAACAGTATTTGAT  488

seq1  GAGACAGTGGATTGACTAGACTAGCTCCTGCAGATAGACCTAGCTGACAT  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGACAGTGGATTGACTAGACTAGCTCCTGCAGATAGACCTAGCTGACAT  538

seq1  GTCCTTCCTTTTCTTTTTTTTCATTCCCATCATTTTTGCCATCATACTGT  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTCCTTCCTTTTCTTTTTTTTCATTCCCATCATTTTTGCCATCATACTGT  588

seq1  TGACATGTTTGAGTATGTTATTATATGTAGTATTACAAGTATTATTATTA  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGACATGTTTGAGTATGTTATTATATGTAGTATTACAAGTATTATTATTA  638

seq1  TTATAAGAAGGAAGACCAGGAAAAGCACTCTTTTCTGATATCATTCCAGA  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTATAAGAAGGAAGACCAGGAAAAGCACTCTTTTCTGATATCATTCCAGA  688

seq1  TAAACAATCTTTAAATGGTAATTCTCTTCTGTTATAATTTGTTAGGAATC  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAAACAATCTTTAAATGGTAATTCTCTTCTGTTATAATTTGTTAGGAATC  738

seq1  TTGTATGTATGTATCCTTGTATCAAGATGATTCTGAGTCTCTGCTAAAAA  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGTATGTATGTATCCTTGTATCAAGATGATTCTGAGTCTCTGCTAAAAA  788

seq1  ACAAACCCTTCATGAAGAAGCTATCTTCAATGAACAAAGGTGTGGTCATT  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACAAACCCTTCATGAAGAAGCTATCTTCAATGAACAAAGGTGTGGTCATT  838

seq1  CAGATCTGAAGTAGGGTACCTAGACCTCAACACTACTGACACTTGAGGAC  900
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGATCTGAAGTAGGGTACCTAGACCTCAACACTACTGACACTTGAGGAC  888

seq1  AGACTGGTCTTTGCCATGAATAGTTTGGTAGCATCACTGGACTCTGCCCA  950
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGACTGGTCTTTGCCATGAATAGTTTGGTAGCATCACTGGACTCTGCCCA  938

seq1  TTAAATGCGAGCAGCCGCCTGTGCTACTAAGTATTTTTCTCAACTTGACA  1000
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTAAATGCGAGCAGCCGCCTGTGCTACTAAGTATTTTTCTCAACTTGACA  988

seq1  CAAGCTAGAGCCATCTGGAAAGAGGGACCCTCAACTAAGAAACTGCTTCA  1050
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAAGCTAGAGCCATCTGGAAAGAGGGACCCTCAACTAAGAAACTGCTTCA  1038

seq1  TCAGATTGCATATAGGCAAGTCTTTGGGGAGTATTTTCTTGACCAATGAG  1100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCAGATTGCATATAGGCAAGTCTTTGGGGAGTATTTTCTTGACCAATGAG  1088

seq1  TGGATATAGGAATTC  1115
      |||||||||||||||
seq2  TGGATATAGGAATTC  1103