BAC Information

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BAC

Clone NameB6Ng01-019F23
Chromosome1 (Build37)
Map Location 31,306,870 - 31,307,536
singlet/doubletsinglet
Overlap genenone
Upstream geneEG624138, LOC100040699, Phf3, EG638995, Ptp4a1, EG435615, LOC669402, EG435616, 4931428L18Rik, LOC666020, Gluld1, 4930521A18Rik
Downstream geneEG226957, EG624262, LOC624275, LOC666056, LOC100041238, Khdrbs2
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-019F23.bB6Ng01-019F23.g
ACCDH852479DH852480
length9421,049
definitionDH852479|Mus musculus domesticus DNA, BAC clone: B6Ng01-019F23, 5' end.DH852480|Mus musculus domesticus DNA, BAC clone: B6Ng01-019F23, 3' end.
singlet/doubletsinglet---
BLAST hituniqueno hit data
sequence
gaattctcacctgaggaatactgaatggctgagaagcacctgaaaaaatg
ttcagcatccttaatcatcagagaaatgcaaatcaaaacaaccctgagaa
taacttttaaagtaggcatctattaacttaggaaatatggctagcaaatg
acaaatcagaccctgtgaaatgaaagaagtctctgtgggatgccctgttt
tattctctctggcccctacaggagaaattctctaccctctgtattgtctc
tgtttggtgcaccaatcacgtgtcaaatcatgtatgttttttgtttcatt
gtctgaatgattgtttcattgtctgaatgactgactgttttatgttttat
gttgaaaaaaaatggataaaactttacctgctgattcactctcagtttgc
acaatggaggctgaaagaggcccctcactttaaccaaaaatcaagcacag
caggagaggtcctgctgaaaaacttgtttttaaagaaaatgagtctacaa
cctcttaattctaaggcaaataagctgatagttgtttttccttaaaaagt
ctcggcaattttgtgattattgtgtttagcaaatgacaaaatgtgttttt
atcttataattatagctataaaaagtaaaattctttgattgatctaaatt
cataagattcgtgtagccacttcatttggtttttaattgatcttaaaggt
ataaatataatctgcatatcttggtcatagaaaattggcttataagttat
ttgagtatgattaagaaggtataacactggttacaaagttagcttaagta
gtaactcagggctagcgtcattttcaaacaaaagcacctggcataaacca
gcccagaaaactagtcctctaaagatacttctaaattgagataatatttt
atgtaattcttatcctagaaagtagacttatagagatagatt
gaattccctggtggggcagccactggggtccatgtggatgtccagaggct
gtgcattgttgcccccttcactggatgtagtactctgaagaagtggtccc
atctctcactgctgacaatactcaggagagcaagtcctgcacctcacccc
agcagaacagtggaactggcccttgcaataggagtatgggtgacgccagc
tcagaggacttgagcaccacccaggcccagatctaggactctgagttagc
ccactccaaaatcaatattatctgcaaatggttaggaggtttaaagggtc
cagtcctgctgatccatggttgaaggatctctatgacacagggccacaat
gggatgaccagaaagagtccccatgaggatccaatattgatggtgtcaca
gaagccagagatcactaagaccaatggctcattgcaaggaatatttgaaa
atgaggatgtaaagacagagggatatactgtgggacacattgtgacacac
tgcagtttctacaatgaaaatttttttatgtgttgtcattattgctgctg
gcgtgtgtgtgtgtgtgatttgggggataacaagggcaaagggcagatac
taggggacagggagatgagtgggactggagtacatgatgtaaaactcaca
agtaatcaataaaaagttaaaaataataatgtaataatacataatttccc
aaggaaattaaataaaatcattttaaaacatatatttgaattttgaaaga
aataaacccgagatgcgcaacctgttctgtagattttttatttctgtgtg
gtgctgagaatcaaacccaggtttttgtgctgctaggtaaacactccatc
atggagctatatgctcagccataaagcatgtatcttcttgttcttactga
ttttccttgggaaaaaatactcagagaagagaggttttaatcccaagcaa
taaaaggccaagtccctgttcaacttcctattactggacttcagaataca
tccgtaatggatatccagaacaaattgggtatctctcggaatagccctc
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr1_31306870_31307536
seq2: B6Ng01-019F23.b_43_709

seq1  GAATTCTCACCTGAGGAATACTGAATGGCTGAGAAGCACCTGAAAAAATG  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCTCACCTGAGGAATACTGAATGGCTGAGAAGCACCTGAAAAAATG  50

seq1  TTCAGCATCCTTAATCATCAGAGAAATGCAAATCAAAACAACCCTGAGAA  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCAGCATCCTTAATCATCAGAGAAATGCAAATCAAAACAACCCTGAGAA  100

seq1  TAACTTTTAAAGTAGGCATCTATTAACTTAGGAAATATGGCTAGCAAATG  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAACTTTTAAAGTAGGCATCTATTAACTTAGGAAATATGGCTAGCAAATG  150

seq1  ACAAATCAGACCCTGTGAAATGAAAGAAGTCTCTGTGGGATGCCCTGTTT  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACAAATCAGACCCTGTGAAATGAAAGAAGTCTCTGTGGGATGCCCTGTTT  200

seq1  TATTCTCTCTGGCCCCTACAGGAGAAATTCTCTACCCTCTGTATTGTCTC  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATTCTCTCTGGCCCCTACAGGAGAAATTCTCTACCCTCTGTATTGTCTC  250

seq1  TGTTTGGTGCACCAATCACGTGTCAAATCATGTATGTTTTTTGTTTCATT  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTTTGGTGCACCAATCACGTGTCAAATCATGTATGTTTTTTGTTTCATT  300

seq1  GTCTGAATGATTGTTTCATTGTCTGAATGACTGACTGTTTTATGTTTTAT  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTCTGAATGATTGTTTCATTGTCTGAATGACTGACTGTTTTATGTTTTAT  350

seq1  GTTGAAAAAAAATGGATAAAACTTTACCTGCTGATTCACTCTCAGTTTGC  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTTGAAAAAAAATGGATAAAACTTTACCTGCTGATTCACTCTCAGTTTGC  400

seq1  ACAATGGAGGCTGAAAGAGGCCCCTCACTTTAACCAAAAATCAAGCACAG  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACAATGGAGGCTGAAAGAGGCCCCTCACTTTAACCAAAAATCAAGCACAG  450

seq1  CAGGAGAGGTCCTGCTGAAAAACTTGTTTTTAAAGAAAATGAGTCTACAA  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGGAGAGGTCCTGCTGAAAAACTTGTTTTTAAAGAAAATGAGTCTACAA  500

seq1  CCTCTTAATTCTAAGGCAAATAAGCTGATAGTTGTTTTTCCTTAAAAAGT  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTCTTAATTCTAAGGCAAATAAGCTGATAGTTGTTTTTCCTTAAAAAGT  550

seq1  CTCGGCAATTTTGTGATTATTGTGTTTAGCAAATGACAAAATGTGTTTTT  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCGGCAATTTTGTGATTATTGTGTTTAGCAAATGACAAAATGTGTTTTT  600

seq1  ATCTTATAATTATAGCTATAAAAAGTAAAATTCTTTGATTGATCTAAATT  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATCTTATAATTATAGCTATAAAAAGTAAAATTCTTTGATTGATCTAAATT  650

seq1  CATAAGATTCGTGTAGC  667
      |||||||||||||||||
seq2  CATAAGATTCGTGTAGC  667