BAC Information

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BAC

Clone NameB6Ng01-019P02
Chromosome1 (Build37)
Map Location 60,979,532 - 60,980,186
singlet/doubletsinglet
Overlap genenone
Upstream geneAls2cr13, LOC100042496, Ica1l, Wdr12, Carf, Nbeal1, Cyp20a1, Abi2, Raph1, LOC100043027, LOC100042533, Eif4a-ps4, Cd28, LOC667555, Rpl18-rs8, Ctla4
Downstream geneLOC100043049, Icos, LOC433313, LOC100042566, Pard3b
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-019P02.b
ACCDH852884
length953
definitionDH852884|Mus musculus domesticus DNA, BAC clone: B6Ng01-019P02, 5' end.
singlet/doubletsinglet---
BLAST hituniqueno hit data
sequence
gaattcatggtgtgtttcctgagaatgagatgataatgtaacccaggtgg
gtttgagataatagaaataatggccaatggaagccaatgggtgttaccct
gcatgtatacctgtgaaccttgaaatggggctatgtcaaaactaaaaggg
ggaaatgtcacggcactctggtggagtcagcttgacaaagcgaaagctgg
gaagctggttcatgaagcaaagagtttcaaggaaactcccttcccggggg
cctggcattttctccctaatctatataaaccataaaattaatttttccat
tcccacattagtctagtgtatggatccacgtgctctctatatagtattac
cttattgtaaatgccttttaagattgtatcctaaagccttttcccagtgt
tcttagattccagatagcagcaaggagcttaacccattcagtaactaatt
aagcactacaataaaacaataaagcactagccattaactcagctgtctgc
agaaagagactaaaagtctcactgagatagaaatcttttactacaggcta
cattccatgtcaagagtaagttgatatactaccctgataagggggaactc
tccagacaggatgagttttactagacctaagaatttagagctctgtgata
acacattactcttaaggcctgtcaagaggtaacaaccccctgatgctatt
aaccctaaagtgtgaaattcttgcctggcattaggctgatcctaggcagg
gcttgttatccctaatgtaaacatttaattagtccctgcaaattcctttt
ctgctgtaactggtgaatctcagtgtatcttgtctttttgtgatttgtat
cttctgataattcgttgtaaataagtcttgaagctcaccagaacattaca
ttcagatccacctcactcttgcgtggttgtctgtctgtaactacatccga
ctc
quality valuesOpen.




Alignment Information

BAC End 1BAC End 2
seq1: chr1_60979532_60980186
seq2: B6Ng01-019P02.b_46_700

seq1  GAATTCATGGTGTGTTTCCTGAGAATGAGATGATAATGTAACCCAGGTGG  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCATGGTGTGTTTCCTGAGAATGAGATGATAATGTAACCCAGGTGG  50

seq1  GTTTGAGATAATAGAAATAATGGCCAATGGAAGCCAATGGGTGTTACCCT  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTTTGAGATAATAGAAATAATGGCCAATGGAAGCCAATGGGTGTTACCCT  100

seq1  GCATGTATACCTGTGAACCTTGAAATGGGGCTATGTCAAAACTAAAAGGG  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCATGTATACCTGTGAACCTTGAAATGGGGCTATGTCAAAACTAAAAGGG  150

seq1  GGAAATGTCACGGCACTCTGGTGGAGTCAGCTTGACAAAGCGAAAGCTGG  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGAAATGTCACGGCACTCTGGTGGAGTCAGCTTGACAAAGCGAAAGCTGG  200

seq1  GAAGCTGGTTCATGAAGCAAAGAGTTTCAAGGAAACTCCCTTCCCGGGGG  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAAGCTGGTTCATGAAGCAAAGAGTTTCAAGGAAACTCCCTTCCCGGGGG  250

seq1  CCTGGCATTTTCTCCCTAATCTATATAAACCATAAAATTAATTTTTCCAT  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTGGCATTTTCTCCCTAATCTATATAAACCATAAAATTAATTTTTCCAT  300

seq1  TCCCACATTAGTCTAGTGTATGGATCCACGTGCTCTCTATATAGTATTAC  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCCCACATTAGTCTAGTGTATGGATCCACGTGCTCTCTATATAGTATTAC  350

seq1  CTTATTGTAAATGCCTTTTAAGATTGTATCCTAAAGCCTTTTCCCAGTGT  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTATTGTAAATGCCTTTTAAGATTGTATCCTAAAGCCTTTTCCCAGTGT  400

seq1  TCTTAGATTCCAGATAGCAGCAAGGAGCTTAACCCATTCAGTAACTAATT  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTTAGATTCCAGATAGCAGCAAGGAGCTTAACCCATTCAGTAACTAATT  450

seq1  AAGCACTACAATAAAACAATAAAGCACTAGCCATTAACTCAGCTGTCTGC  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGCACTACAATAAAACAATAAAGCACTAGCCATTAACTCAGCTGTCTGC  500

seq1  AGAAAGAGACTAAAAGTCTCACTGAGATAGAAATCTTTTACTACAGGCTA  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGAAAGAGACTAAAAGTCTCACTGAGATAGAAATCTTTTACTACAGGCTA  550

seq1  CATTCCATGTCAAGAGTAAGTTGATATACTACCCTGATAAGGGGGAACTC  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATTCCATGTCAAGAGTAAGTTGATATACTACCCTGATAAGGGGGAACTC  600

seq1  TCCAGACAGGATGAGTTTTACTAGACCTAAGAATTTAGAGCTCTGTGATA  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCCAGACAGGATGAGTTTTACTAGACCTAAGAATTTAGAGCTCTGTGATA  650

seq1  ACACA  655
      |||||
seq2  ACACA  655