BAC Information

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BAC

Clone NameB6Ng01-020G05
Chromosome1 (Build37)
Map Location 131,266,937 - 131,397,930
singlet/doubletdoublet
Overlap geneThsd7b
Upstream geneDars, LOC620659, Cxcr4, LOC100042732
Downstream geneLOC100042745, LOC100042740, Daf2, Cd55
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-020G05.bB6Ng01-020G05.g
ACCDH853200DH853201
length1,049520
definitionDH853200|Mus musculus domesticus DNA, BAC clone: B6Ng01-020G05, 5' end.DH853201|Mus musculus domesticus DNA, BAC clone: B6Ng01-020G05, 3' end.
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(131,266,937 - 131,268,006)(131,397,405 - 131,397,930)
sequence
gaattccacatagacaaatgttgtgttttctctcatttatggtttctaga
tttaatgtaagtacataaaatcacacaatacacatatgcacacacacaca
cacacacacacacacacacacacacacacatagtgtcattcaagtagaag
ttaaaattgtctagaaggtagagaggcatcaatagaatgacaaggacaat
aaaacagacaatagaggagaggagtgtgagtaagaacttctttacacata
tataaaagcttaaaatgtaaaaatgtaaaaataattgtcatatttttaaa
gatttagacctctaattttggcattcattcgtttatgaagaactcatatc
agaacatttcctgttcagtttttcccaagactgaaattaagcctagtaca
caacatagaagttgtcaaaatattgtaatatttacctattggctaacatg
tatccctgccttgatcgactgaaccttgtcacaaaggatatgtgcagtat
gttagaagcctcctaggatcctgttcaggaagtattctgagtgctgcagg
tgacatgtatggaacattagccttgtctgtccctatagatgctgttatag
gacatgcagtgtcatctgtcctcagtgggtgatggccttttcttagctat
ctacaaaactgggagttttctggaatgttttctgacaaacatcccaattt
aaaagtagtaatatgttcttcccagttgtagataccatcccttttaaagt
tcccatttcttagactgtgaaggtgtctccataagtaaactgcttttcac
acaaacatgggaccctagtctgatatctaggacccatgtgaaagtgggta
tgataaaatgtgtttttatctgagctctggaggcagagacaggaagatta
ctggagcttgctgccagccatctctctggttggtgacttttctttcccac
tgatagacctgtatcaacagcaagcaaaatgaagaaacaagcctacaacc
ttgagagaagctccacatgaccactgattttctagacaagagtccagaa
tgggctgctgtgggttcagaaggatctggatcttgcatggtcactctgcc
ctgctctctaggtgataacttagtctcaagctccttgtggtagcaggata
actaccagaagctcctgtgtgatgttgtcctggaactgatgaatttattt
ctgctaacaccaaccagctttaaaggacaatgacaccaactggtcagatc
tagttaatgctgtcttttggtccaggtaggggacctgtgatgattaatct
tcattgatcactgtcatcttgactggattaagaaatgctgggaaattagt
gaagcacacctctggatgtttcttcaagggcattttaagagacaattgca
tcagtaaggctctgacctaccaacgaattaattagatcagctcttttatg
gaataccacaatattattgagaggtagtcaagaataggggcatgtccttg
aatttgaaagtgagcaaggagggatattatgggagaatgtggaaagaaga
aagggaagggggaaatggta
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr1_131266937_131268006
seq2: B6Ng01-020G05.b_45_1093

seq1  GAATTCCACATAGACAAATGTTGTGTTTTCTCTCATTTATGGTTTCTAGA  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCCACATAGACAAATGTTGTGTTTTCTCTCATTTATGGTTTCTAGA  50

seq1  TTTAATGTAAGTACATAAAATCACACAATACACATATGCACACACACACA  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTAATGTAAGTACATAAAATCACACAATACACATATGCACACACACACA  100

seq1  CACACACACACACACACACACACACACACATAGTGTCATTCAAGTAGAAG  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CACACACACACACACACACACACACACACATAGTGTCATTCAAGTAGAAG  150

seq1  TTAAAATTGTCTAGAAGGTAGAGAGGCATCAATAGAATGACAAGGACAAT  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTAAAATTGTCTAGAAGGTAGAGAGGCATCAATAGAATGACAAGGACAAT  200

seq1  AAAACAGACAATAGAGGAGAGGAGTGTGAGTAAGAACTTCTTTACACATA  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAACAGACAATAGAGGAGAGGAGTGTGAGTAAGAACTTCTTTACACATA  250

seq1  TATAAAAGCTTAAAATGTAAAAATGTAAAAATAATTGTCATATTTTTAAA  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATAAAAGCTTAAAATGTAAAAATGTAAAAATAATTGTCATATTTTTAAA  300

seq1  GATTTAGACCTCTAATTTTGGCATTCATTCGTTTATGAAGAACTCATATC  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GATTTAGACCTCTAATTTTGGCATTCATTCGTTTATGAAGAACTCATATC  350

seq1  AGAACATTTCCTGTTCAGTTTTTCCCAAGACTGAAATTAAGCCTAGTACA  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGAACATTTCCTGTTCAGTTTTTCCCAAGACTGAAATTAAGCCTAGTACA  400

seq1  CAACATAGAAGTTGTCAAAATATTGTAATATTTACCTATTGGCTAACATG  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAACATAGAAGTTGTCAAAATATTGTAATATTTACCTATTGGCTAACATG  450

seq1  TATCCCTGCCTTGATCGACTGAACCTTGTCACAAAGGATATGTGCAGTAT  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATCCCTGCCTTGATCGACTGAACCTTGTCACAAAGGATATGTGCAGTAT  500

seq1  GTTAGAAGCCTCCTAGGATCCTGTTCAGGAAGTATTCTGAGTGCTGCAGG  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTTAGAAGCCTCCTAGGATCCTGTTCAGGAAGTATTCTGAGTGCTGCAGG  550

seq1  TGACATGTATGGAACATTAGCCTTGTCTGTCCCTATAGATGCTGTTATAG  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGACATGTATGGAACATTAGCCTTGTCTGTCCCTATAGATGCTGTTATAG  600

seq1  GACATGCAGTGTCATCTGTCCTCAGTGGGTGATGGCCTTTTCTTAGCTAT  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GACATGCAGTGTCATCTGTCCTCAGTGGGTGATGGCCTTTTCTTAGCTAT  650

seq1  CTACAAAACTGGGAGTTTTCTGGAATGTTTTCTGACAAACATCCCAATTT  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTACAAAACTGGGAGTTTTCTGGAATGTTTTCTGACAAACATCCCAATTT  700

seq1  AAAAGTAGTAATATGTTCTTCCCAGTTGTAGATACCATCCCTTTTAAAGT  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAAGTAGTAATATGTTCTTCCCAGTTGTAGATACCATCCCTTTTAAAGT  750

seq1  TCCCATTTCTTAGACTGTGAAGGTGTCTCCATAAGTAAACTGCTTTTCAC  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCCCATTTCTTAGACTGTGAAGGTGTCTCCATAAGTAAACTGCTTTTCAC  800

seq1  ACAAACATGGGACCCTAGTCTGATATCTAGGACCCATGTGAAAAGTGGGT  850
      |||||||||||||||||||||||||||||||||||||||| |||||||||
seq2  ACAAACATGGGACCCTAGTCTGATATCTAGGACCCATGTG-AAAGTGGGT  849

seq1  ATGATAAAATGTGTTTTTAATCTGAGCCCTGGAGGCAGAGACAGGAAGAT  900
      |||||||||||||||||| |||||||| ||||||||||||||||||||||
seq2  ATGATAAAATGTGTTTTT-ATCTGAGCTCTGGAGGCAGAGACAGGAAGAT  898

seq1  TACTGGAGCTTGCTGCCAGCCAGTCTCTCCTGGTTGGTGACTTTTCTTTC  950
      |||||||||||||||||||||| ||||| |||||||||||||||||||||
seq2  TACTGGAGCTTGCTGCCAGCCA-TCTCT-CTGGTTGGTGACTTTTCTTTC  946

seq1  CCACTGATAGAACCTGTATCAAACAAGCAAAGCAAAAAATGAAGAAAACA  1000
      |||||||||| |||||||||||   ||| ||||  ||||||||||||   
seq2  CCACTGATAG-ACCTGTATCAA--CAGC-AAGC--AAAATGAAGAAA--C  988

seq1  AAGCCTACAAACACATGAAGAGGAAGCTCCAACATTGACCACTGATATTC  1050
      |||||||||   || |  ||| |||||||| ||| ||||||||||| || 
seq2  AAGCCTACA---ACCTTGAGA-GAAGCTCC-ACA-TGACCACTGAT-TTT  1031

seq1  CTAGACAAAGAGTCACAGAA  1070
      |||||| ||||||| |||||
seq2  CTAGAC-AAGAGTC-CAGAA  1049

seq1: chr1_131397405_131397930
seq2: B6Ng01-020G05.g_70_595 (reverse)

seq1  TACCATTTCCCCCTTCCCTTTCTTCTTTCCACATTCTCCCATAATATCCC  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TACCATTTCCCCCTTCCCTTTCTTCTTTCCACATTCTCCCATAATATCCC  50

seq1  TCCTTGCTCACTTTCAAATTCAAGGACATGCCCCTATTCTTGACTACCTC  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCCTTGCTCACTTTCAAATTCAAGGACATGCCCCTATTCTTGACTACCTC  100

seq1  TCAATAATATTGTGGTATTCCATAAAAGAGCTGATCTAATTAATTCGTTG  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCAATAATATTGTGGTATTCCATAAAAGAGCTGATCTAATTAATTCGTTG  150

seq1  GTAGGTCAGAGCCTTACTGATGCAATTGTCTCTTAAAATGCCCTTGAAGA  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTAGGTCAGAGCCTTACTGATGCAATTGTCTCTTAAAATGCCCTTGAAGA  200

seq1  AACATCCAGAGGTGTGCTTCACTAATTTCCCAGCATTTCTTAATCCAGTC  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AACATCCAGAGGTGTGCTTCACTAATTTCCCAGCATTTCTTAATCCAGTC  250

seq1  AAGATGACAGTGATCAATGAAGATTAATCATCACAGGTCCCCTACCTGGA  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGATGACAGTGATCAATGAAGATTAATCATCACAGGTCCCCTACCTGGA  300

seq1  CCAAAAGACAGCATTAACTAGATCTGACCAGTTGGTGTCATTGTCCTTTA  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCAAAAGACAGCATTAACTAGATCTGACCAGTTGGTGTCATTGTCCTTTA  350

seq1  AAGCTGGTTGGTGTTAGCAGAAATAAATTCATCAGTTCCAGGACAACATC  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGCTGGTTGGTGTTAGCAGAAATAAATTCATCAGTTCCAGGACAACATC  400

seq1  ACACAGGAGCTTCTGGTAGTTATCCTGCTACCACAAGGAGCTTGAGACTA  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACACAGGAGCTTCTGGTAGTTATCCTGCTACCACAAGGAGCTTGAGACTA  450

seq1  AGTTATCACCTAGAGAGCAGGGCAGAGTGACCATGCAAGATCCAGATCCT  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTTATCACCTAGAGAGCAGGGCAGAGTGACCATGCAAGATCCAGATCCT  500

seq1  TCTGAACCCACAGCAGCCCAGAATTC  526
      ||||||||||||||||||||||||||
seq2  TCTGAACCCACAGCAGCCCAGAATTC  526