BAC Information

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BAC

Clone NameB6Ng01-020H14
Chromosome1 (Build37)
Map Location 19,716,550 - 19,717,237
singlet/doubletsinglet
Overlap genenone
Upstream geneEG435611, LOC100040189, Tcfap2d, LOC100040413, Tcfap2b, LOC100040198, LOC226901
Downstream genePkhd1
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-020H14.b
ACCDH853260
length690
definitionDH853260|Mus musculus domesticus DNA, BAC clone: B6Ng01-020H14, 5' end.
singlet/doubletsinglet---
BLAST hituniqueno hit data
sequence
gaattcctcaaacatacagataaattcaaattgtttgattttcccaccaa
tgggatatagtttcctgtaatccagtactcaagaacacccaggtttgaga
ccaggtttgagttacaaaatgagactctgaaaaaacaatttcagctatac
atgtgaaatcactatttccaaattatggctaatgtgatccatgccatagg
aggtatgtcttgtggcagtagccagttttaatatttactttttgaattga
aactgtcttttacctgtaaattacttctaaagtgtttttaaagccttgta
tgtttcataatagtctttcaaataaccttcagtaaaaccaaatataatta
aatgcaaaaaatgacaatgaaaatgttcctcaaatagatgtgctgtctaa
tggtaagaaataacattgttggcctgagcaccctggagagcaatcttggt
tcccggattctgccaagactagtctgctaaggtgagagtgtggactacag
aagctaacagcttccgggacaggtggaagccacgcagcttctcaggcaga
tcccgtttcaggctccagacatcttggcaccttcccttccagaggagagg
tgtctgccctgcctgggatagctttgccagagcacccaggggagccatct
ttggttcccagatcctacctagactattctgcacatgtga
quality valuesOpen.




Alignment Information

BAC End 1BAC End 2
seq1: chr1_19716550_19717237
seq2: B6Ng01-020H14.b_33_722 (reverse)

seq1  TCACCTGTGCAGAATAGTCTAGGTAGGATCTGGGAACC-AAGATGGCTCC  49
      |||| ||||||||||||||||||||||||||||||||| |||||||||||
seq2  TCACATGTGCAGAATAGTCTAGGTAGGATCTGGGAACCAAAGATGGCTCC  50

seq1  CCTGGGTGCTCTGGCAAAGCTATCCCAGGCAGGGCAGACACCTCTCCTCT  99
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTGGGTGCTCTGGCAAAGCTATCCCAGGCAGGGCAGACACCTCTCCTCT  100

seq1  GGAAGGGAAGGTGCCCAGATGTCTGGAGCCTGAAACGGGATCTGCCTGAG  149
      ||||||||||||||| ||||||||||||||||||||||||||||||||||
seq2  GGAAGGGAAGGTGCCAAGATGTCTGGAGCCTGAAACGGGATCTGCCTGAG  150

seq1  AAGCTGCGTGGCTTCCACCTGTCCCGGAAGCTGTTAGCTTCTGTAGTCCA  199
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGCTGCGTGGCTTCCACCTGTCCCGGAAGCTGTTAGCTTCTGTAGTCCA  200

seq1  CACTCTCACCTTAGCAGACTAGTCTTGGCAGAATCCGGGAACCAAGATTG  249
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CACTCTCACCTTAGCAGACTAGTCTTGGCAGAATCCGGGAACCAAGATTG  250

seq1  CTCTCCAGGGTGCTCAGGCCAACAATGTTATTTCTTACCATTAGACAGCA  299
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCTCCAGGGTGCTCAGGCCAACAATGTTATTTCTTACCATTAGACAGCA  300

seq1  CATCTATTTGAGGAACATTTTCATTGTCATTTTTTGCATTTAATTATATT  349
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATCTATTTGAGGAACATTTTCATTGTCATTTTTTGCATTTAATTATATT  350

seq1  TGGTTTTACTGAAGGTTATTTGAAAGACTATTATGAAACATACAAGGCTT  399
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGTTTTACTGAAGGTTATTTGAAAGACTATTATGAAACATACAAGGCTT  400

seq1  TAAAAACACTTTAGAAGTAATTTACAGGTAAAAGACAGTTTCAATTCAAA  449
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAAAAACACTTTAGAAGTAATTTACAGGTAAAAGACAGTTTCAATTCAAA  450

seq1  AAGTAAATATTAAAACTGGCTACTGCCACAAGACATACCTCCTATGGCAT  499
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGTAAATATTAAAACTGGCTACTGCCACAAGACATACCTCCTATGGCAT  500

seq1  GGATCACATTAGCCATAATTTGGAAATAGTGATTTCACATGTATAGCTGA  549
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGATCACATTAGCCATAATTTGGAAATAGTGATTTCACATGTATAGCTGA  550

seq1  AATTGTTTTTTCAGAGTCTCATTTTGTAACTCAAACCTGGTCTCAAACCT  599
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATTGTTTTTTCAGAGTCTCATTTTGTAACTCAAACCTGGTCTCAAACCT  600

seq1  GGGTGTTCTTGAGTACTGGATTACAGGAAACTATATCCCATTGGTGGGAA  649
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGGTGTTCTTGAGTACTGGATTACAGGAAACTATATCCCATTGGTGGGAA  650

seq1  AATC-AACAATTTGAATTTATCTGTATGTTTGAGGAATTC  688
      |||| |||||||||||||||||||||||||||||||||||
seq2  AATCAAACAATTTGAATTTATCTGTATGTTTGAGGAATTC  690