MoG+ -Mouse Genome database with high added value-

BAC Information

BAC name
Region	Chromosome -
Gene	search by nearby gene name.
Format	rows / page	Page	1

BAC

Clone Name	B6Ng01-021C10
Chromosome	1 (Build37)
Map Location	151,602,931 - 151,603,816
singlet/doublet	singlet
Overlap gene	none
Upstream gene	LOC100042792, LOC435647, LOC100042813
Downstream gene	Pla2g4a, Ptgs2, LOC676712, LOC100043257, LOC100043261, Pdc, BC003331, Tpr, EG625534
Link	Open Mouse BAC browser

Click to get alignment info.

name	LOC100042792 (CDS detail)
type	gene
link	vega ensembl
xref	GeneID:100042792
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 1 EST, 1 Protein pseudo : _no_value

name	LOC435647 (CDS detail)
type	gene
link	vega ensembl
xref	GeneID:435647
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 2 Proteins pseudo : _no_value

name	LOC100042813 (CDS detail)
type	gene
link	vega ensembl
xref	GeneID:100042813
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 3 Proteins pseudo : _no_value

name	Pla2g4a (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:18783 MGI:1195256
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Ptgs2 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:19225 MGI:97798
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	LOC676712 (CDS detail)
type	gene
link	vega ensembl
xref	GeneID:676712
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 3 Proteins pseudo : _no_value

name	LOC100043257 (CDS detail)
type	gene
link	vega ensembl
xref	GeneID:100043257
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 11 mRNAs, 416 ESTs, 15 Proteins

name	LOC100043261 (CDS detail)
type	gene
link	vega ensembl
xref	GeneID:100043261
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 5 mRNAs, 74 ESTs, 2 Proteins pseudo : _no_value

name	Pdc (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:20028 MGI:98090
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	BC003331 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:226499 MGI:2385108
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 2 mRNAs

name	Tpr (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:108989 MGI:1922066
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	EG625534 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:625534 MGI:3643639
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 25 ESTs, 2 Proteins

name	Pla2g4a (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:133891677 GeneID:18783 MGI:1195256
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : phospholipase A2, group IVA (cytosolic, calcium-dependent) transcript_id : NM_008869.3

name	Ptgs2 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:118130137 GeneID:19225 MGI:97798
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : prostaglandin-endoperoxide synthase 2 transcript_id : NM_011198.3

name	LOC100043257 (CDS detail)
type	mRNA
link	vega ensembl NCBI
xref	GI:149234329 GeneID:100043257
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 11 mRNAs, 416 ESTs, 15 Proteins product : similar to RNA binding motif protein 3 transcript_id : XM_001480197.1

name	Pdc (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:13277351 GeneID:20028 MGI:98090
definition	exception : unclassified transcription discrepancy note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : phosducin transcript_id : NM_024458.1

name	BC003331 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:116805316 GeneID:226499 MGI:2385108
definition	exception : unclassified transcription discrepancy note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : cDNA sequence BC003331 transcript_id : NM_001077237.1

name	BC003331 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:116805314 GeneID:226499 MGI:2385108
definition	exception : unclassified transcription discrepancy note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : cDNA sequence BC003331 transcript_id : NM_145511.2

name	Tpr (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:27477056 GeneID:108989 MGI:1922066
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : translocated promoter region transcript_id : NM_133780.2

name	EG625534 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:94363984 GeneID:625534 MGI:3643639
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 24 ESTs, 2 Proteins product : predicted gene, EG625534, transcript variant 2 transcript_id : XM_890112.2

name	EG625534 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:149234332 GeneID:625534 MGI:3643639
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 1 EST, 1 Protein product : predicted gene, EG625534, transcript variant 1 transcript_id : XM_001480213.1

name	Pla2g4a (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:6679369 CCDS:CCDS15352.1 GeneID:18783 MGI:1195256
definition	GO_function : GO:0005509 - calcium ion binding [Evidence IEA]; GO:0016787 - hydrolase activity [Evidence IEA]; GO:0004622 - lysophospholipase activity [Evidence IEA]; GO:0004623 - phospholipase A2 activity [Evidence IEA]; GO:0004620 - phospholipase activity [Evidence IEA] GO_process : GO:0016042 - lipid catabolism [Evidence IEA]; GO:0009395 - phospholipid catabolism [Evidence IEA] codon_start : 1 note : phospholipase A2, group 4; cPLA2-alpha; Type IV PLA2; cytosolic PLA2; cytosolic phospholipase A2 product : cytosolic phospholipase A2, group IVA protein_id : NP_032895.1

name	Ptgs2 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:31981525 CCDS:CCDS15353.1 GeneID:19225 MGI:97798
definition	GO_component : GO:0005737 - cytoplasm [Evidence IDA]; GO:0016020 - membrane [Evidence IEA]; GO:0005634 - nucleus [Evidence IDA] GO_function : GO:0005506 - iron ion binding [Evidence IEA]; GO:0046872 - metal ion binding [Evidence IEA]; GO:0016491 - oxidoreductase activity [Evidence IEA]; GO:0016702 - oxidoreductase activity, acting on single donors with incorporation of molecular oxygen, incorporation of two atoms of oxygen [Evidence IEA]; GO:0004601 - peroxidase activity [Evidence IEA]; GO:0004666 - prostaglandin-endoperoxide synthase activity [Evidence IEA] GO_process : GO:0042640 - anagen [Evidence IMP]; GO:0008217 - blood pressure regulation [Evidence IMP]; GO:0006633 - fatty acid biosynthesis [Evidence IEA]; GO:0030216 - keratinocyte differentiation [Evidence NAS]; GO:0008610 - lipid biosynthesis [Evidence IEA]; GO:0001516 - prostaglandin biosynthesis [Evidence IEA] codon_start : 1 note : cyclooxygenase 2; prostaglandin G/H synthase; cyclooxygenase-2 product : prostaglandin-endoperoxide synthase 2 protein_id : NP_035328.2

name	LOC100043257 (CDS detail)
type	CDS
link	vega ensembl NCBI
xref	GI:149234330 GeneID:100043257
definition	codon_start : 1 product : hypothetical protein protein_id : XP_001480247.1

name	Pdc (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:13277352 CCDS:CCDS15354.1 GeneID:20028 MGI:98090
definition	GO_component : GO:0005829 - cytosol [Evidence TAS] GO_function : GO:0005095 - GTPase inhibitor activity [Evidence ISS] GO_process : GO:0008277 - regulation of G-protein coupled receptor protein signaling pathway [Evidence ISS]; GO:0050896 - response to stimulus [Evidence IEA]; GO:0009586 - rhodopsin mediated phototransduction [Evidence ISS]; GO:0007601 - visual perception [Evidence IEA] codon_start : 1 note : rod photoreceptor 1 product : phosducin protein_id : NP_077778.1

name	BC003331 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:116805317 GeneID:226499 MGI:2385108
definition	GO_function : GO:0016491 - oxidoreductase activity [Evidence IEA]; GO:0008270 - zinc ion binding [Evidence IEA] codon_start : 1 note : isoform 2 is encoded by transcript variant 2 product : hypothetical protein LOC226499 isoform 2 protein_id : NP_001070705.1

name	BC003331 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:116805315 CCDS:CCDS15355.1 GeneID:226499 MGI:2385108
definition	GO_function : GO:0016491 - oxidoreductase activity [Evidence IEA]; GO:0008270 - zinc ion binding [Evidence IEA] codon_start : 1 note : isoform 1 is encoded by transcript variant 1 product : hypothetical protein LOC226499 isoform 1 protein_id : NP_663486.2

name	Tpr (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:27477057 GeneID:108989 MGI:1922066
definition	GO_component : GO:0005635 - nuclear envelope [Evidence IDA]; GO:0005634 - nucleus [Evidence IEA] GO_function : GO:0003674 - molecular_function [Evidence ND] GO_process : GO:0008150 - biological_process [Evidence ND] codon_start : 1 product : nuclear pore complex-associated protein Tpr protein_id : NP_598541.2

name	EG625534 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:82882918 GeneID:625534 MGI:3643639
definition	codon_start : 1 product : hypothetical protein isoform 2 protein_id : XP_895205.1

name	EG625534 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:149234333 GeneID:625534 MGI:3643639
definition	codon_start : 1 product : hypothetical protein isoform 1 protein_id : XP_001480263.1

name	LOC435647 (CDS detail)
type	exon
link	vega ensembl
xref	GeneID:435647
definition	number : 1 pseudo : _no_value

name	LOC435647 (CDS detail)
type	exon
link	vega ensembl
xref	GeneID:435647
definition	number : 2 pseudo : _no_value

name	LOC100042813 (CDS detail)
type	exon
link	vega ensembl
xref	GeneID:100042813
definition	number : 1 pseudo : _no_value

name	LOC100042813 (CDS detail)
type	exon
link	vega ensembl
xref	GeneID:100042813
definition	number : 2 pseudo : _no_value

name	LOC676712 (CDS detail)
type	exon
link	vega ensembl
xref	GeneID:676712
definition	number : 1 pseudo : _no_value

name	(CDS detail)
type	STS
link
xref	UniSTS:128534
definition	standard_name : D1Mit196

name	(CDS detail)
type	STS
link
xref	UniSTS:128819
definition	standard_name : D1Mit449

name	(CDS detail)
type	STS
link
xref	UniSTS:128613
definition	standard_name : D1Mit265

name	(CDS detail)
type	STS
link
xref	UniSTS:225157
definition

name	(CDS detail)
type	STS
link
xref	UniSTS:128641
definition	standard_name : D1Mit288

name	(CDS detail)
type	STS
link
xref	UniSTS:163173
definition	standard_name : RH126465

name	(CDS detail)
type	STS
link
xref	UniSTS:128728
definition	standard_name : D1Mit369

name	(CDS detail)
type	STS
link
xref	UniSTS:158864
definition	standard_name : MHAa78c8.seq

name	(CDS detail)
type	STS
link
xref	UniSTS:158862
definition	standard_name : M72394

name	(CDS detail)
type	STS
link
xref	UniSTS:254306
definition	standard_name : Ptgs2

name	(CDS detail)
type	STS
link
xref	UniSTS:272389
definition	standard_name : PMC27868P2

name	(CDS detail)
type	STS
link
xref	UniSTS:256486
definition	standard_name : Ptgs2

name	(CDS detail)
type	STS
link
xref	UniSTS:271010
definition	standard_name : PMC14708P2

name	(CDS detail)
type	STS
link
xref	UniSTS:271683
definition	standard_name : PMC18294P1

name	(CDS detail)
type	STS
link
xref	UniSTS:271016
definition	standard_name : PMC148819P3

name	(CDS detail)
type	STS
link
xref	UniSTS:224190
definition

name	(CDS detail)
type	STS
link
xref	UniSTS:178476
definition	standard_name : M88242

name	(CDS detail)
type	STS
link
xref	UniSTS:128541
definition	standard_name : D1Mit200

name	(CDS detail)
type	STS
link
xref	UniSTS:463217
definition	standard_name : Pdc

name	(CDS detail)
type	STS
link
xref	UniSTS:158863
definition	standard_name : C77892

name	(CDS detail)
type	STS
link
xref	UniSTS:124435
definition	standard_name : 41.MMHAP84FRF11.seq

name	LOC100042792 (CDS detail)
type	misc_RNA
link	vega ensembl NCBI
xref	GI:149234301 GeneID:100042792
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 1 EST, 1 Protein product : similar to ribosomal protein L24 pseudo : _no_value transcript_id : XR_033926.1

name	LOC100043261 (CDS detail)
type	misc_RNA
link	vega ensembl NCBI
xref	GI:149234331 GeneID:100043261
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 5 mRNAs, 74 ESTs, 2 Proteins product : similar to Bex4 protein pseudo : _no_value transcript_id : XR_034577.1

clone name	MSMg01-493N06
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-216I01
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-215L16
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-543L13
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-414M22
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-463F06
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-303M20
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-060M11
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-163B06
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-137O14
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-048F22
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-502L07
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-147D06
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-234B21
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-358J22
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-291N17
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-355B19
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-121B11
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-121C12
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-266C03
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-311E10
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-384I07
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-433P04
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-085M09
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-500F22
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-304M19
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-443G12
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-522A22
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-405F05
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-164B20
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-297K24
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-491P16
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-237O10
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-418I20
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-233H06
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-505C08
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-517G07
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-135N13
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-433M19
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-344D20
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-457H15
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-135F18
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-309I19
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-444O12
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-061E18
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-383L17
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-058J03
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-309K02
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-071L14
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-465F01
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-343L01
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-391B06
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-492A05
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-405A03
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-145G11
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-391I21
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-493O05
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-170A13
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-411H16
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-190M21
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-073M01
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-364B08
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-288G23
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-143D18
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-264F02
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-131N08
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-099B20
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-177C05
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-276A21
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-275N23
singlet/doublet	doublet
plural/unique	plural

clone name	MSMg01-121B07
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-069N18
singlet/doublet	doublet
plural/unique	plural

clone name	MSMg01-116D19
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-297J12
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-548E23
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-536L13
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-156H13
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-354K05
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-137B08
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-470O20
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-514G17
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-467N19
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-089J14
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-082G22
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-081J03
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-544E09
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-537M04
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-212E08
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-525F01
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-129A03
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-048N07
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-398O09
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-438F08
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-237M13
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-430I01
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-093N07
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-096H06
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-040M23
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-142C17
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-113M08
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-293J21
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-316H09
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-134N20
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-320E18
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-243I02
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-031P23
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-100F20
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-124B13
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-314O18
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-067A04
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-340F20
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-226L13
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-131B01
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-311M08
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-102D19
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-278J19
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-071G06
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-282N10
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-130M07
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-033E13
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-334I20
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-011H24
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-157J13
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-325F09
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-270I10
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-334B11
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-079O24
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-248F14
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-060B07
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-141B04
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-285I02
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-280C24
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-251M06
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-224J02
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-006J21
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-315O06
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-310L19
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-350D23
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-258I20
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-089M18
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-340G03
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-125H02
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-241G24
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-018C02
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-059G23
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-244C06
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-162O17
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-186J06
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-296P23
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-085K23
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-109A03
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-306I07
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-144B20
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-021C10
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-299A03
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-127J19
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-158P16
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-153L24
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-226D07
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-017K02
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-114C18
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-046I13
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-073O20
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-307F17
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-158A21
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-191I01
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-273I16
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-295L12
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-080A08
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-017I02
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-216G21
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-168K22
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-074K10
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-066F13
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-340N17
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-154L05
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-132C16
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-340M18
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-110C23
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-162C24
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-018M02
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-013H05
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-041P15
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-167A11
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-162C22
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-093L04
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-060P09
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-230H10
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-150H07
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-272G02
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-327F24
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-109G03
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-241F18
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-277M01
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-086O11
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-270E21
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-304F11
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-278F09
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-228N15
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-102C21
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-068D20
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-047C08
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-090H03
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-329K21
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-069F16
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-320M24
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-122D01
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-039J11
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-301G16
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-048I16
singlet/doublet	singlet
plural/unique	unique

BAC End Information

BAC end	BAC-end 1	BAC-end 2
end name	B6Ng01-021C10.b
ACC	DH853739
length	1,072
definition	DH853739\|Mus musculus domesticus DNA, BAC clone: B6Ng01-021C10, 5' end.
singlet/doublet	singlet	---
BLAST hit	unique	no hit data
sequence	gaattctttgttcagttctgagccccattttttaatgggattatttgatt ttctggagtccaccttcttgagttcttcatatatattggatattagaccc ctatctgatttaggataggtcaagatcctttcccaatctgttggtggtct ttttgtcttattgaaggtgtcttttgccttgcagaagctttgcagtttca tgagatcccatttgtcaattctcaatcttacagcgcaagccattgctctt ctattcaggaatttttcccctgtgcccatatcttcaaggcttttccccac tttctcctctataagttccagtgtctctggttttatgtgaagttccttga accacttagatttggccttagtacaaggagataggaatggatcgattcgc attcttctacatgataacaaccagttgtgccagcaccatttgttgaaaat gctgtctttcttccactggatggttttagctcccttgtcgaagagcaagt gaccataggtgtgtgggttcatttctgggtcttcaattctattccattgg tctacttgtctgtcactataccagtaccatgcagtttttatcacaattgc tctgtagtaaagctttaggtcaggcatggtgattccaccagaggttcttt tatccttgagaagagtttttgctaacctaggttttttgttattccagatg acctcatccattcactcctgatgttcacctcacaccctgtgaatcccaat tccatttatgtgccacagaagaatggaaggtgtgtacttgctggagtttg catcccatttatccctctgaattttacatagcaaaggctcgacctccagc ctctggtactactggtagtttgtggtagaaattgggactcagtagaagaa gttaggatattaggagtaccttttcctctcttttgttttctagtcaccct gagaaaaactacatcttatggaagctattctagtatagtcatgagaagag gaccacttactctggcctgaatctgagaacatgagccagagaaaggcctc atagatttatttatcagcattt
quality values	Open. Hide. 61 42 30 30 61 61 61 61 61 43 61 61 27 14 47 61 61 61 47 47 61 61 61 61 55 55 32 61 61 61 61 61 61 52 55 47 61 61 61 47 40 61 61 61 61 61 59 61 61 61 61 61 61 61 61 61 61 61 61 61 61 59 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 59 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 59 59 61 61 61 61 61 61 61 61 61 61 61 61 61 61 59 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 59 61 61 59 44 55 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 59 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 59 61 61 61 61 61 61 61 61 61 55 55 59 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 55 55 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 50 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 55 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 50 61 61 61 61 61 61 61 61 53 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 53 61 61 53 61 61 61 61 61 61 61 61 61 43 61 50 61 61 53 61 61 61 61 61 53 61 57 57 53 57 53 53 53 57 57 57 57 57 57 57 53 57 57 57 52 38 57 53 57 53 57 57 53 57 53 52 42 53 57 57 57 53 57 53 53 53 53 57 57 52 57 53 57 52 53 52 57 57 53 57 57 57 53 38 57 57 53 46 57 37 57 57 57 50 53 50 57 57 57 57 50 53 53 50 57 39 57 53 57 57 53 57 53 53 57 45 47 39 50 47 47 57 47 52 53 57 57 52 24 46 37 52 52 27 46 28 42 47 46 57 50 57 39 30 53 42 43 30 47 53 31 45 47 11 57 32 47 50 42 57 57 50 40 45 45 53 45 50 53 53 27 52 34 30 57 40 38 57 57 57 52 31 34 50 27 36 47 53 40 40 30 43 16 57 57 57 57 46 34 23 37 36 50 53 40 45 24 37 57 31 52 53 29 53 41 40 28 48 42 48 30 42 42 42 36 53 37 37 53 40 53 41 25 53 28 40 37 33 37 30 46 41 37 41 37 29 57 53 25 53 34 48 40 33 33 25 57 45 23 33 40 33 24 35 29 29 57 41 41 31 32 32 31 28 47 28 31 32 35 48 43 24 46 38 36 33 25 30 30 24 21 10 32 27 37 22 27 32 32 37 40 29 38 30 30 48 23 39 51 36 29 27 28 29 35 51 29 27 29 51 29 29 29 28 51 43 29 29 29 28 35 38 29 51 51 28 29 29 26 29 33 28 29 29 46 26 21 12 8 30 29 28 28 20 30 22 25 41 34 24 24 27 35 29 27 33 33 13 21 28 28 29 29 22 33 32 17 29 20 28 51 33 23 17 39 29 15 35 16 43 51 29 27 26 36 51 28 25 21 34 30 22 23 30 29 14 29 11 6 8 29 27 28 24 25 28 20 13 5 7 14 38 6 12 6 19 19 9 21 27 21 28 51 51 25 28 12 9 19 23 29 19 51 51 19 20 9 38 51 28 24 18 34 26 27 29 11 22 38 25 22 30 26 10 9 35 35 35 26 18 14 14 24 8 18 22 19 32 19 18 27 24 13 7 8 4 4 4 6 6 17 23 29 23 31 19 17 9 15 12 29 18 29 10 13 4 15 8 4 3 4 8 7 9 22 13 23 7 5 7 5 4 10 9 21 12 11 15 9 26 20 30 11 10 10 15 12 5 27 16 14 6 16 16 6 5 9 9 16 7 6 4 8 26 24 9 5 20 16 11 10 5 7 11 9 19 15 27 7 7 8 31 8 12 6 3 3 3 5 9 25 30 18

Alignment Information

BAC End 1

BAC End 2

seq1: chr1_151602931_151603816
seq2: B6Ng01-021C10.b_243_1115

seq1  ATGAGATCCCATTTGTCAATTCTCAATCTTACAGCGCAAGCCATTGCTCT  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGAGATCCCATTTGTCAATTCTCAATCTTACAGCGCAAGCCATTGCTCT  50

seq1  TCTATTCAGGAATTTTTCCCCTGTGCCCATATCTTCAAGGCTTTTCCCCA  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTATTCAGGAATTTTTCCCCTGTGCCCATATCTTCAAGGCTTTTCCCCA  100

seq1  CTTTCTCCTCTATAAGTTCCAGTGTCTCTGGTTTTATGTGAAGTTCCTTG  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTTCTCCTCTATAAGTTCCAGTGTCTCTGGTTTTATGTGAAGTTCCTTG  150

seq1  AACCACTTAGATTTGGCCTTAGTACAAGGAGATAGGAATGGATCGATTCG  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AACCACTTAGATTTGGCCTTAGTACAAGGAGATAGGAATGGATCGATTCG  200

seq1  CATTCTTCTACATGATAACAACCAGTTGTGCCAGCACCATTTGTTGAAAA  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATTCTTCTACATGATAACAACCAGTTGTGCCAGCACCATTTGTTGAAAA  250

seq1  TGCTGTCTTTCTTCCACTGGATGGTTTTAGCTCCCTTGTCGAAGAGCAAG  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGCTGTCTTTCTTCCACTGGATGGTTTTAGCTCCCTTGTCGAAGAGCAAG  300

seq1  TGACCATAGGTGTGTGGGTTCATTTCTGGGTCTTCAATTCTATTCCATTG  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGACCATAGGTGTGTGGGTTCATTTCTGGGTCTTCAATTCTATTCCATTG  350

seq1  GTCTACTTGTCTGTCACTATACCAGTACCATGCAGTTTTTATCACAATTG  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTCTACTTGTCTGTCACTATACCAGTACCATGCAGTTTTTATCACAATTG  400

seq1  CTCTGTAGTAAAGCTTTAGGTCAGGCATGGTGATTCCACCAGAGGTTCTT  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCTGTAGTAAAGCTTTAGGTCAGGCATGGTGATTCCACCAGAGGTTCTT  450

seq1  TTATCCTTGAGAAGAGTTTTTGCTAACCTAGGTTTTTTGTTATTCCAGAT  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTATCCTTGAGAAGAGTTTTTGCTAACCTAGGTTTTTTGTTATTCCAGAT  500

seq1  GACCTCATCCATTCACTCCTGATGTTCACCTCACACCCTGTGAATCCCAA  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GACCTCATCCATTCACTCCTGATGTTCACCTCACACCCTGTGAATCCCAA  550

seq1  TTCCATTTATGTGCCACAGAAGAATGGAAGGTGTGTACTTGCTGGAGTTT  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCCATTTATGTGCCACAGAAGAATGGAAGGTGTGTACTTGCTGGAGTTT  600

seq1  GCATCCCATTTATCCCTCTGAATTTTACATAGCAAAGGCTCGACCTCCAG  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCATCCCATTTATCCCTCTGAATTTTACATAGCAAAGGCTCGACCTCCAG  650

seq1  CCTCTGGTACTACTGGTAGTTTGTGGTAGAAATTGGGACTCAGTAGAAGG  700
      |||||||||||||||||||||||||||||||||||||||||||||||| |
seq2  CCTCTGGTACTACTGGTAGTTTGTGGTAGAAATTGGGACTCAGTAGAA-G  699

seq1  AAGTTAGGATATTAGGGAGGTACCTTTTCCTCTCTTTTGTTTTCTAGTCA  750
      ||||||||||||||||   |||||||||||||||||||||||||||||||
seq2  AAGTTAGGATATTAGG--AGTACCTTTTCCTCTCTTTTGTTTTCTAGTCA  747

seq1  CCCTGAGAAAAACTACATCTTATGGAAGGCTATTCTAGTATAGTCATGAA  800
      ||||||||||||||||||||||||||| ||||||||||||||||||||| 
seq2  CCCTGAGAAAAACTACATCTTATGGAA-GCTATTCTAGTATAGTCATGA-  795

seq1  GAAAGAGGAACCACCTACTCTGGCCTGAAATCTGAGAAACCATGAGCCAA  850
        |||||| ||||| |||||||||||| ||||||||||  |||||||| |
seq2  -GAAGAGG-ACCACTTACTCTGGCCTG-AATCTGAGAA--CATGAGCC-A  839

seq1  GAGAAAGCCCTCATAGATTTATTTAATCAGGCATTT  886
      ||||||| |||||||||||||||| |||| ||||||
seq2  GAGAAAGGCCTCATAGATTTATTT-ATCA-GCATTT  873

BAC Information

Search Parameter

Search Result

BAC

BAC End Information

Alignment Information