BAC Information

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BAC

Clone NameB6Ng01-021G11
Chromosome1 (Build37)
Map Location 175,588,599 - 175,589,648
singlet/doubletsinglet
Overlap genenone
Upstream geneLOC100040320, Crp, LOC665875, Apcs, Olfr16, GA_x5J8B7W5Q1F-395172-396104, Olfr1408, GA_x5J8B7W5Q1F-344462-343889, Olfr1406, Olfr218, Olfr1405-ps1, Olfr1404, Fcer1a, Olfr1403, Darc, Cadm3, Aim2, EG240921, BC094916, LOC623121, AI447904
Downstream geneE430029J22Rik, LOC665972, AI607873, Ifi204, EG666028, LOC100040462, Mnda, Ifi203, Ifi202b, Ifi205, Olfr433, Olfr432, GA_x5J8B7W3B3M-30314-31216, Olfr430, Olfr429, Olfr426, Olfr1528-ps1, Olfr244, Olfr424, Olfr423-ps1, Olfr421, Olfr422-ps1, Olfr420, Spna1, Olfr419, 1810030J14Rik, Olfr417, GA_x5J8B7W3B3M-312879-313274, GA_x5J8B7W3B3M-318013-318414, Olfr415, Olfr414, Olfr220, Fmn2
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-021G11.bB6Ng01-021G11.g
ACCDH853919DH853920
length1,0381,016
definitionDH853919|Mus musculus domesticus DNA, BAC clone: B6Ng01-021G11, 5' end.DH853920|Mus musculus domesticus DNA, BAC clone: B6Ng01-021G11, 3' end.
singlet/doubletsinglet---
BLAST hituniqueno hit data
sequence
gaattcagtgggtaactattgccaccaagaactgaatatatttcctgcag
agaagaacatatgcagtacaggtactttcagtttaattacttcctaaacc
attctcctacttattaataattctccaagcctgaaaataacctgagaagg
atattacacacatgcacatctactcatgaataaatgggaaggagtttgga
attagatgcctgctggatgagagctaaactgctttcctttagcagtttag
tgatttagcagttggtgaataagttattgcttccttagcatttctgaact
atttatggatatttatgaatggataagcccagttggtacagtatgcctat
gcaatgataacctggaagccttgacagctgtggcagagctcttaggtctt
agtcacatcagggacctgaagtgacctttgtccaacatagtttttctctg
aaggagaaggaagactatctggtgtttcatgtaatttgagatacaaaaca
aatgacaccagatggtgggtctacaagaaggatcatattcttgtggtgtt
actgttaggctgcttagggtcaatgctttacgtgcatggccacatgggca
tacaagaaatttttttctaaaagctggtctttggcagctcttgtaccttc
tgcttttgacaaagaaaaaagtagcaggtgggaaggagcagctacaaatg
gtgcgttctagtgctgtaatttgcttacatgccttggttatcagggccct
gtagctcttgtgtagacagtcctaagtcattcttactctttactcttcaa
ctcttacaactcttgaaagttagcactcagcattcatttaccttggattt
atagcttcatggcgagactaggtttggggagttttcagtctctgatagtg
acaatttttaaagattcaagtttagagtacttgagacgttgacttcaaaa
gttcagcactcttgggagtcttctgtgccagtctgcattctctcctttag
actcatgctaggacttatcatcttctcacttccacatc
gaattcctgatctttccagaacttttatcatgaatgggtgttggatcttg
tcaaatgctttttctgcatccaacgagatgatcatgtggtttttgtcttt
gagtttgtttatatagtggattacattgatggattttcgtatattaaacc
atccctgcattcctggaataaaacctacttggtcaggatggatgattgct
ttaatgtgttcttggattcggttagcgagaattttattgaggatttttgc
atcaatattcataagagaaattggtctgaagttctctatctttgttggat
ctttctgtggtttaggtatcagagtaattgtggcttcatagaatgagttg
ggtagagttccctctacttctattttgtggaatagtttgtgcagaactgg
aattagatcttctttgaaggtctgatagaactctgcactaaacccgtctg
gtcctgggctttttttggctgggagactatttataactgcttctatttct
ttaggggatatgggactgtttagaaggtcaacttgatcctgattcaactt
tggtacctggtatctgtccagaaatttgtccatttcgtccaggttttcca
gttttgttgagtatagccttttgtagaaggatctgatggtgttttggatt
tcttcaggatctgttgttatgtctccatttttcagttctgattttgttaa
ttaggattttgtctctgtgccctctagtgagtctagctaagggttatcta
tcttgttgttttctcaaagaaccaactcctcgtttggttattctttgatt
cttcttgtttcacttggttgatttcacccctgagttgattatttcctgcc
gtctactctcttgggtgaattgttccttttttctagagcttaggtgggtg
ccagctgctagtagggctccctccggtcctcatggagcactcaagcatat
atccctctaaaatgcttccttggtccaaagttggggacgttgggctcatt
ctaacccaaaaagctt
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr1_175588599_175589648
seq2: B6Ng01-021G11.b_43_1074

seq1  GAATTCAGTGGGTAACTATTGCCACCAAGAACTGAATATATTTCCTGCAG  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCAGTGGGTAACTATTGCCACCAAGAACTGAATATATTTCCTGCAG  50

seq1  AGAAGAACATATGCAGTACAGGTACTTTCAGTTTAATTACTTCCTAAACC  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGAAGAACATATGCAGTACAGGTACTTTCAGTTTAATTACTTCCTAAACC  100

seq1  ATTCTCCTACTTATTAATAATTCTCCAAGCCTGAAAATAACCTGAGAAGG  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTCTCCTACTTATTAATAATTCTCCAAGCCTGAAAATAACCTGAGAAGG  150

seq1  ATATTACACACATGCACATCTACTCATGAATAAATGGGAAGGAGTTTGGA  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATATTACACACATGCACATCTACTCATGAATAAATGGGAAGGAGTTTGGA  200

seq1  ATTAGATGCCTGCTGGATGAGAGCTAAACTGCTTTCCTTTAGCAGTTTAG  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTAGATGCCTGCTGGATGAGAGCTAAACTGCTTTCCTTTAGCAGTTTAG  250

seq1  TGATTTAGCAGTTGGTGAATAAGTTATTGCTTCCTTAGCATTTCTGAACT  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGATTTAGCAGTTGGTGAATAAGTTATTGCTTCCTTAGCATTTCTGAACT  300

seq1  ATTTATGGATATTTATGAATGGATAAGCCCAGTTGGTACAGTATGCCTAT  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTTATGGATATTTATGAATGGATAAGCCCAGTTGGTACAGTATGCCTAT  350

seq1  GCAATGATAACCTGGAAGCCTTGACAGCTGTGGCAGAGCTCTTAGGTCTT  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCAATGATAACCTGGAAGCCTTGACAGCTGTGGCAGAGCTCTTAGGTCTT  400

seq1  AGTCACATCAGGGACCTGAAGTGACCTTTGTCCAACATAGTTTTTCTCTG  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTCACATCAGGGACCTGAAGTGACCTTTGTCCAACATAGTTTTTCTCTG  450

seq1  AAGGAGAAGGAAGACTATCTGGTGTTTCATGTAATTTGAGATACAAAACA  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGGAGAAGGAAGACTATCTGGTGTTTCATGTAATTTGAGATACAAAACA  500

seq1  AATGACACCAGATGGTGGGTCTACAAGAAGGATCATATTCTTGTGGTGTT  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATGACACCAGATGGTGGGTCTACAAGAAGGATCATATTCTTGTGGTGTT  550

seq1  ACTGTTAGGCTGCTTAGGGTCAATGCTTTACGTGCATGGCCACATGGGCA  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTGTTAGGCTGCTTAGGGTCAATGCTTTACGTGCATGGCCACATGGGCA  600

seq1  TACAAGAAATTTTTTTCTAAAAGCTGGTCTTTGGCAGCTCTTGTACCTTC  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TACAAGAAATTTTTTTCTAAAAGCTGGTCTTTGGCAGCTCTTGTACCTTC  650

seq1  TGCTTTTGACAAAGAAAAAAGTAGCAGGTGGGAAGGAGCAGCTACAAATG  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGCTTTTGACAAAGAAAAAAGTAGCAGGTGGGAAGGAGCAGCTACAAATG  700

seq1  GTGCGTTCTAGTGCTGTAATTTGCTTACATGCCTTGGTTATCAGGGCCCT  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTGCGTTCTAGTGCTGTAATTTGCTTACATGCCTTGGTTATCAGGGCCCT  750

seq1  GTAGCTCTTGTGTAGACAGTCCTAAGTCATTCTTACTCTTTACTCTTCAA  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTAGCTCTTGTGTAGACAGTCCTAAGTCATTCTTACTCTTTACTCTTCAA  800

seq1  CTCTTACAACTCTTGAAAGTTTAGCAACTCAGCATTCATTTACCTTGGAA  850
      ||||||||||||||||||| ||||| ||||||||||||||||||||||| 
seq2  CTCTTACAACTCTTGAAAG-TTAGC-ACTCAGCATTCATTTACCTTGGAT  848

seq1  TTATAGCTTCATGGCGAGACTAGGTTTGGGGAGTTTTCAGTCTCTGATAG  900
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTATAGCTTCATGGCGAGACTAGGTTTGGGGAGTTTTCAGTCTCTGATAG  898

seq1  TGACAAATTTTTAAGATTCAAGGTTTAGAGTACCTGAGAACGTTGACTCC  950
      |||||| |||| ||||||||| ||||||||||| |||| ||||||||| |
seq2  TGACAATTTTTAAAGATTCAA-GTTTAGAGTACTTGAG-ACGTTGACTTC  946

seq1  AAAAGTTCAGCAGCTCTTGGGAAGTCTTCCTGTGGCCAGGTCCTGCATTT  1000
      |||||||||||| |||||||| |||||| |||| |||||   ||||| ||
seq2  AAAAGTTCAGCA-CTCTTGGG-AGTCTT-CTGT-GCCAG--TCTGCA-TT  989

seq1  CTCTCCTTTAGATCTCTATGTCTTAGGTACTTTATCATCTTCTCTACTTC  1050
      |||||||||||| ||| |||   |||| || ||||||||||||| |||||
seq2  CTCTCCTTTAGA-CTC-ATG--CTAGG-AC-TTATCATCTTCTC-ACTTC  1032