BAC Information

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BAC

Clone NameB6Ng01-021L14
Chromosome1 (Build37)
Map Location 175,122,880 - 175,281,874
singlet/doubletdoublet
Overlap geneOlfr218, Olfr1405-ps1, Olfr1404, Fcer1a, Olfr1403, Darc, Cadm3
Upstream geneWdr42a, Pea15a, Casq1, Timm23p, Atp1a2, Igsf8, Kcnj9, Kcnj10, Pigm, LOC665819, Slamf9, LOC100040274, Igsf9, Tagln2, Ccdc19, EG240916, Slamf8, Fcrl6, Dusp23, LOC100040320, Crp, LOC665875, Apcs, Olfr16, GA_x5J8B7W5Q1F-395172-396104, Olfr1408, GA_x5J8B7W5Q1F-344462-343889, Olfr1406
Downstream geneAim2, EG240921, BC094916, LOC623121, AI447904, E430029J22Rik, LOC665972, AI607873, Ifi204, EG666028, LOC100040462, Mnda, Ifi203, Ifi202b, Ifi205, Olfr433, Olfr432, GA_x5J8B7W3B3M-30314-31216, Olfr430, Olfr429, Olfr426, Olfr1528-ps1, Olfr244, Olfr424, Olfr423-ps1, Olfr421, Olfr422-ps1, Olfr420, Spna1, Olfr419, 1810030J14Rik
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-021L14.bB6Ng01-021L14.g
ACCDH854149DH854150
length563717
definitionDH854149|Mus musculus domesticus DNA, BAC clone: B6Ng01-021L14, 5' end.DH854150|Mus musculus domesticus DNA, BAC clone: B6Ng01-021L14, 3' end.
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(175,122,880 - 175,123,442)(175,281,161 - 175,281,874)
sequence
gaattccttgccatctgttatttaaatttttataaattaaaatacaatta
tctgttttttaactttctttcatccagccatttctggtttacccccatta
agttttctcagattcatggcttctatttttcctttattgttgtttcatac
atgcatacacacacatatcacatacatacatacatatatattttaacatg
atgttcctaaatatatagatacagtctgatatgattagggcatatggtaa
ttacatacagatggtttctaaatatttatccttatactcacaaataaatg
tagctttcatgcctcaacaaaaaaactgctctttgtagcatatgggagca
ttacagaatactacaacagatcaaatgcagaaaacaaatattcttttgtt
ctccaagtctatctaatttacctgatccagccccatttgattcacacaac
taatgaacctaagtttcagggaacatcatggaagaggtttggaaagagta
taggagccagaggaacagaaattttgaaatggaattaatttgcctagaaa
ctatacctgtgaa
gaattctctgcttatatacagaggcaataaatggaacacatcccaaacac
ttcatttattgaaggttacttgttgctttctggctctgaagagttcagct
gggtttcaatgttatacatcaccattttacttatttatcttatgcaggga
aaaacaaaacaaaacaaacaaatgcctaatgaacaggtcagagcaaggaa
aggacaagactcagaccaaggacagacgaaagagtggagacctgaaacag
gctctgcctgatgagcagtatgtacctcctagtgtggaggtggcaaaata
ctaggctagtcacatgcaccaagagctcatgaggatggaagtcttaagga
aatgtagatttaaatggtatcgtgtctgctcttaaccagctcagagttaa
catgaggagcccggtcactgaacaaacactcaacagtgcagtgtgtggag
atgctctataaaacaggaaaagctgttgaaagctgaggagcccccaaggg
gcaggaagggttcttgagaagtgtgctatttgggttccttcatgtgaacc
aaggagcctcttttggaagtcaattttaaaaggggttataccggcctgca
tatcccttgcaattgttctgagataaaaatgacttcttgggtgaaaaatc
tactctgcaaactgaatgtccctcactgaagtatgacaatggctatttca
actgcccatttgaataa
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr1_175122880_175123442
seq2: B6Ng01-021L14.b_33_596

seq1  GGAATTCC-TGCCATCTGTTATTTAAATTTTTATAAATTAAAATACAATT  49
      |||||||| |||||||||||||||||||||||||||||||||||||||||
seq2  GGAATTCCTTGCCATCTGTTATTTAAATTTTTATAAATTAAAATACAATT  50

seq1  ATCTGTTTTTTAACTTTCTTTCATCCAGCCATTTCTGGTTTACCCCCATT  99
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATCTGTTTTTTAACTTTCTTTCATCCAGCCATTTCTGGTTTACCCCCATT  100

seq1  AAGTTTTCTCAGATTCATGGCTTCTATTTTTCCTTTATTGTTGTTTCATA  149
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGTTTTCTCAGATTCATGGCTTCTATTTTTCCTTTATTGTTGTTTCATA  150

seq1  CATGCATACACACACATATCACATACATACATACATATATATTTTAACAT  199
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATGCATACACACACATATCACATACATACATACATATATATTTTAACAT  200

seq1  GATGTTCCTAAATATATAGATACAGTCTGATATGATTAGGGCATATGGTA  249
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GATGTTCCTAAATATATAGATACAGTCTGATATGATTAGGGCATATGGTA  250

seq1  ATTACATACAGATGGTTTCTAAATATTTATCCTTATACTCACAAATAAAT  299
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTACATACAGATGGTTTCTAAATATTTATCCTTATACTCACAAATAAAT  300

seq1  GTAGCTTTCATGCCTCAACAAAAAAACTGCTCTTTGTAGCATATGGGAGC  349
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTAGCTTTCATGCCTCAACAAAAAAACTGCTCTTTGTAGCATATGGGAGC  350

seq1  ATTACAGAAGACTACAACAGATCAAATGCAGAAAACAAATATTCTTTTGT  399
      ||||||||| ||||||||||||||||||||||||||||||||||||||||
seq2  ATTACAGAATACTACAACAGATCAAATGCAGAAAACAAATATTCTTTTGT  400

seq1  TCTCCAAGTCTATCTAATTTACCTGATCCAGCCCCATTTGATTCACACAA  449
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTCCAAGTCTATCTAATTTACCTGATCCAGCCCCATTTGATTCACACAA  450

seq1  CTAATGAACCTAAGTTTCAGGGAACATCATGGAAGAGGTTTGGAAAGAGT  499
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTAATGAACCTAAGTTTCAGGGAACATCATGGAAGAGGTTTGGAAAGAGT  500

seq1  ATAGGAGCCAGAGGAACAGAAATTTTGAAATGGAATTAATTTGCCTAGAA  549
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATAGGAGCCAGAGGAACAGAAATTTTGAAATGGAATTAATTTGCCTAGAA  550

seq1  ACTATACCTGTGAA  563
      ||||||||||||||
seq2  ACTATACCTGTGAA  564

seq1: chr1_175281161_175281874
seq2: B6Ng01-021L14.g_61_777 (reverse)

seq1  TTATTCAAATGGGCAGTTGAAATAGCC-TTGTCATACTTCAGTGTGGGAC  49
      ||||||||||||||||||||||||||| |||||||||||||||| |||||
seq2  TTATTCAAATGGGCAGTTGAAATAGCCATTGTCATACTTCAGTGAGGGAC  50

seq1  CTTCAGTTTGCAGAGTAGA-TTTTCACCCATGATGTCATTTTTATCTCAG  98
       |||||||||||||||||| |||||||||| || ||||||||||||||||
seq2  ATTCAGTTTGCAGAGTAGATTTTTCACCCAAGAAGTCATTTTTATCTCAG  100

seq1  AACAATTGCAAGGGATATGCAGGCCGGTATAACCCCTTTTAAAGTTGACT  148
      ||||||||||||||||||||||||||||||||||||||||||| ||||||
seq2  AACAATTGCAAGGGATATGCAGGCCGGTATAACCCCTTTTAAAATTGACT  150

seq1  TCC-AAAGAGGCTCCTTGGTTCACCTGAAGGAACCCAAATAGCACACTTC  197
      ||| |||||||||||||||||||| |||||||||||||||||||||||||
seq2  TCCAAAAGAGGCTCCTTGGTTCACATGAAGGAACCCAAATAGCACACTTC  200

seq1  TCAAGAACCCTTCCTGCCCCTTGGGGGCTCCTCAGCTTTCAACAGCTTTT  247
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCAAGAACCCTTCCTGCCCCTTGGGGGCTCCTCAGCTTTCAACAGCTTTT  250

seq1  CCTGTTTTCTAGAGCATCTCCACACACTGCACTGTTGCGTGTTTGTTCAG  297
      |||||||| |||||||||||||||||||||||||||| ||||||||||||
seq2  CCTGTTTTATAGAGCATCTCCACACACTGCACTGTTGAGTGTTTGTTCAG  300

seq1  TGACCGGGCTCCTCATGTTAACTCTGAGCTGGTTAAGAGCAGACACGATA  347
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGACCGGGCTCCTCATGTTAACTCTGAGCTGGTTAAGAGCAGACACGATA  350

seq1  CCATTTAAATCTACATTTCCTTAAGACTTCCATCCTCATGAGCTCTTGGT  397
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCATTTAAATCTACATTTCCTTAAGACTTCCATCCTCATGAGCTCTTGGT  400

seq1  GCATGTGACTAGCCTAGTATTTTGCCACCTCCACACTAGGAGGTACATAC  447
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCATGTGACTAGCCTAGTATTTTGCCACCTCCACACTAGGAGGTACATAC  450

seq1  TGCTCATCAGGCAGAGCCTGTTTCAGGTCTCCACTCTTTCGTCTGTCCTT  497
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGCTCATCAGGCAGAGCCTGTTTCAGGTCTCCACTCTTTCGTCTGTCCTT  500

seq1  GGTCTGCGTCTTGTCCTTTCCTTGCTCTGACCTGTTCATTAGGCATTTGT  547
      |||||| |||||||||||||||||||||||||||||||||||||||||||
seq2  GGTCTGAGTCTTGTCCTTTCCTTGCTCTGACCTGTTCATTAGGCATTTGT  550

seq1  TTGTTTTGTTTTGTTTTTCCCTGCATAAGATAAATAAGTAAAATGGTGAT  597
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGTTTTGTTTTGTTTTTCCCTGCATAAGATAAATAAGTAAAATGGTGAT  600

seq1  GTATAACATTGAAACCCAGCTGAACTCTTCAGAGCCAGAAAGCAACAAGT  647
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTATAACATTGAAACCCAGCTGAACTCTTCAGAGCCAGAAAGCAACAAGT  650

seq1  AACCTTCAATAAATGAAGTGTTTGGGATGTGTTCCATTTATTGCCTCTGT  697
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AACCTTCAATAAATGAAGTGTTTGGGATGTGTTCCATTTATTGCCTCTGT  700

seq1  ATATTTGCAGAGAATTC  714
      ||||  |||||||||||
seq2  ATATAAGCAGAGAATTC  717