BAC Information

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BAC

Clone NameB6Ng01-022B03
Chromosome1 (Build37)
Map Location 24,069,366 - 24,069,891
singlet/doubletsinglet
Overlap gene4921533L14Rik
Upstream gene4933415F23Rik, Rn4.5s-ps4, EG623356, Ogfrl1, LOC665782, B3gat2, Smap1, 1110058L19Rik
Downstream geneLOC665808, Col9a1, Col19a1, LOC100040475, LOC665829, Lmbrd1, 4930472D16Rik, LOC669171
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-022B03.bB6Ng01-022B03.g
ACCDH854398DH854399
length1,061753
definitionDH854398|Mus musculus domesticus DNA, BAC clone: B6Ng01-022B03, 5' end.DH854399|Mus musculus domesticus DNA, BAC clone: B6Ng01-022B03, 3' end.
singlet/doublet---singlet
BLAST hitno hit dataunique
sequence
gaattcctgatttgatttaagtagttttaggaaattagtctgactttaat
aattttgggaggttagggtagttgatagaaagtttaaagttagaatcaag
aattgaatgatctccttcctcatacactggcaagagttgcctgagttaaa
gaaaggagtcagtgagcattcatgcattacaagcatgaattgtagcagca
agaaaaatatgcttgggacaaaagaccaaagaaagcattcactctaggta
gggcctgagttccttgattttgtgatgtagggatgcgataacaggttttt
ggtgagcatcatggaatagaaagcttataaataaagaacaaataattctg
agaataataacagagaacagataattaggccagtctagctgactgggaca
tcaataataagatgaaaggcagctaacctgctccttagtaagtacaggct
gtggtcaagcaagcatgggcagaaacttgctgctatagctttggcctgct
taaacttggttcatctatgacaagagaattatggctgaggggttacaatg
agcttgtggaaagtaagatagacagtcttgaaacttagatataagtttca
aaaaagaaatacataaccaataatcctgttgtaatttcctctcttgtgat
gattttaatctgtttttgaagaatatgtctttgtggtgactgtttccaga
aaatatgtaacttgtatctgtgaggtaattttccttctaaatagaaaaac
tgtcttcagggatataaaagggattaagagaaaaaaaaagtgctgggagc
ctgcttttgcttcaaccactgagtgtgtgtgagtgtgtgtgtgatttttc
tccctttcttttctctaattgctagctgccacagatagcagcccctgtca
gttgctatctggaccaactccatcagccctcttagtgcttgaccccagct
gctgctttcagcatggacccgcatttgctgatgcacacttgatgcgtgac
tcagttacgttgtggggtcaaaactggtcctttgacaattggctttcaat
acttaatttcc
gaattcttcatagtatttgtagctgcaatgtgcattttgtagggcagagg
cttacactgaatgttttcctatttttctctccctcctgcctttaaaaaaa
caaaacaaaaaaaaaaaaaaaacgcagcatcactcactgaaccagaagtt
tgctgattcagcttgcctggctagcccacaggctctgggtatccttctgt
ctctgtcctacagagagctaactaccaccatgcctgactttcatatggaa
actagggattcaaaattgagtcttgatgcttgcatagtaagcactttgcc
catgacttcccttcccagtttcctggaaatgtattttattggagttgtca
gagacctaatgtcatgaattgtgaagaatctgaatatttgactttgtaca
ttgttgaaaattattttgcatgcttctccatgagtctgtacgtgttttga
gcagagatacttggaaagcctattaaagacttaaaaagatgcttgtggac
aaccttggaaactgaagtcttaatttgaggcactgagtaaaattttttac
tgcttttagtctgatcatgagaatgttttctgctgatgcaagattagaca
ggtttacatatatctgttgaggcaaccaaacactcaggacatgtgtgaca
ttcacttagccagtgactaccatcagacttaggaaagggaagtaactgat
atgcagccactgtctgtgctgggattacaaaatctcttgtgtcttctctg
agc
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr1_24069366_24069891
seq2: B6Ng01-022B03.g_66_591 (reverse)

seq1  AAATTAAGACTTCAGTTTCCAAGGTTGTCCACAAGCATCTTTTTAAGTCT  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAATTAAGACTTCAGTTTCCAAGGTTGTCCACAAGCATCTTTTTAAGTCT  50

seq1  TTAATAGGCTTTCCAAGTATCTCTGCTCAAAACACGTACAGACTCATGGA  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTAATAGGCTTTCCAAGTATCTCTGCTCAAAACACGTACAGACTCATGGA  100

seq1  GAAGCATGCAAAATAATTTTCAACAATGTACAAAGTCAAATATTCAGATT  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAAGCATGCAAAATAATTTTCAACAATGTACAAAGTCAAATATTCAGATT  150

seq1  CTTCACAATTCATGACATTAGGTCTCTGACAACTCCAATAAAATACATTT  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTCACAATTCATGACATTAGGTCTCTGACAACTCCAATAAAATACATTT  200

seq1  CCAGGAAACTGGGAAGGGAAGTCATGGGCAAAGTGCTTACTATGCAAGCA  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCAGGAAACTGGGAAGGGAAGTCATGGGCAAAGTGCTTACTATGCAAGCA  250

seq1  TCAAGACTCAATTTTGAATCCCTAGTTTCCATATGAAAGTCAGGCATGGT  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCAAGACTCAATTTTGAATCCCTAGTTTCCATATGAAAGTCAGGCATGGT  300

seq1  GGTAGTTAGCTCTCTGTAGGACAGAGACAGAAGGATACCCAGAGCCTGTG  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGTAGTTAGCTCTCTGTAGGACAGAGACAGAAGGATACCCAGAGCCTGTG  350

seq1  GGCTAGCCAGGCAAGCTGAATCAGCAAACTTCTGGTTCAGTGAGTGATGC  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGCTAGCCAGGCAAGCTGAATCAGCAAACTTCTGGTTCAGTGAGTGATGC  400

seq1  TGCGTTTTTTTTTTTTTTTTGTTTTGTTTTTTTAAAGGCAGGAGGGAGAG  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGCGTTTTTTTTTTTTTTTTGTTTTGTTTTTTTAAAGGCAGGAGGGAGAG  450

seq1  AAAAATAGGAAAACATTCAGTGTAAGCCTCTGCCCTACAAAATGCACATT  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAAATAGGAAAACATTCAGTGTAAGCCTCTGCCCTACAAAATGCACATT  500

seq1  GCAGCTACAAATACTATGAAGAATTC  526
      ||||||||||||||||||||||||||
seq2  GCAGCTACAAATACTATGAAGAATTC  526