BAC Information

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BAC

Clone NameB6Ng01-022J16
Chromosome1 (Build37)
Map Location 149,194,138 - 149,195,242
singlet/doubletsinglet
Overlap genenone
Upstream geneLOC383571, B830045N13Rik, LOC100043240
Downstream genenone
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-022J16.bB6Ng01-022J16.g
ACCDH854765DH854766
length1,0881,073
definitionDH854765|Mus musculus domesticus DNA, BAC clone: B6Ng01-022J16, 5' end.DH854766|Mus musculus domesticus DNA, BAC clone: B6Ng01-022J16, 3' end.
singlet/doubletsinglet---
BLAST hituniqueno hit data
sequence
gaattcacaaaatttagtcacttatccctctctatgtaaatgataataat
ttgttaataaaatttaaaacaaattagaaagtaacctttctgttagattg
agaacttataatgaatttcaaaaaattgatattaaattatgtgccagtca
aataagtatattttacagaaagaaataagaaatagttttttcagtatgtg
aggagattattaataatagcatggaaaatttaaaggagaaattaaaacaa
ttttgtatttctttttatatcagaattaaatattgaaagcttgctcaaac
tctctgtactaacagtgtatatcaaaataatcagtgagatatggttaata
ttttgtgggactatcagaagtaagcacactttgaataaagatttccactt
gaggagtggatcttttctccagagatagagtattttgtactattgcattc
attgatgggaagttatcatacatggacatggtatttatataataaattat
ttactaaacattatttgaaatgaacagcattacaatctttctaattagtt
caagaacatatttacatatccacattatagaacataaaataacatgagag
gagacagagaaagaattaaccctgcacttgaatgaaaaaacaaactattt
ttgtcgtgagattatacctattattaaatttggaaaattattattggaaa
tgaaacaaatatgcatatacaatagatgtaaagagttaatcatgatataa
ttactcataaattcataaaaacctaagaaatcagagaagtagggttctgt
ggaagagaaatagaaaataaagtgaaagatgattgtttacagtgtgatta
acaaatgtgcttttaaatacatactcaaatatacctcacataaacaaaaa
cacttgtgtctaagcctatcttaggatgtataaccatttaaattttaata
actaaatatgtatgagaattctgttccaatgatacaaaccaaccaaacca
aacaaaacaaacaaaaccattcatactttagaaagtgacggtatattaaa
ctttaactaatgttctcaagttgggaaacatgaggaat
gaattcagcagagtatttttgctgaaaataggctaaattgctggtagaga
cttgagaaatacagtggaattattttataggaaacaggaaaaataatttt
gagatgtcatttataagaatagaagtagtagcaagggccaatgatatttg
aggggaaattatcattaacattggaaatggaaaatgttaatccgttgtga
atatggttcaatgcttgtcatatgttaattaagttcccaaatttacatga
gaatcccacgtgtaggatgctgagggtttcctgccctcagttggtttcac
ttggtgaataaagttgccagcagctaatgattggtaaggagatagagaca
ggaatctaggatccataggcatgtggactgtgttacttacagttttactg
ctgtgaacagacactatgaccaaggtaagttttttaaagaaaaacatata
tttgggttggcttaaaggtttagaggttcaatctattaccatcaagatgt
caacatctaggcaagcatggtacaggcaaagttgagagttctacaacttc
atctgaaggctgctagtgaaagactgacctccaagcagctaatgtgaggg
ttttatagcccacaccaacactgatacacttactctaacagggccacaca
ttctaatattgtcactatgactgaggcaactcttacaagaacaacaaaag
cataaatccttaaccaggtctgaatttattcttgtacagtaataggctgt
ggggtattgggctatgcaaaaacagtctggtctccagtcgagctgaggtg
gaaccctgtgactgggtggtgataattcacctacacgggatggaaggagt
tctctcatatttcctggactcaaggctcctatcgaagttagcggcccatc
agccctgacaggagaagcatggctagcagtcacatagacaatgtctcaag
cttctgaccttcaggctaaactcctcccagtacctagcaacagtaaagat
tacagcatatcacaagaggggctgttggcccttccccaccctctggctaa
ttgcgattaactctcctaactct
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr1_149194138_149195242
seq2: B6Ng01-022J16.b_47_1134

seq1  GAATTCACAAAATTTAGTCACTTATCCCTCTCTATGTAAATGATAATAAT  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCACAAAATTTAGTCACTTATCCCTCTCTATGTAAATGATAATAAT  50

seq1  TTGTTAATAAAATTTAAAACAAATTAGAAAGTAACCTTTCTGTTAGATTG  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGTTAATAAAATTTAAAACAAATTAGAAAGTAACCTTTCTGTTAGATTG  100

seq1  AGAACTTATAATGAATTTCAAAAAATTGATATTAAATTATGTGCCAGTCA  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGAACTTATAATGAATTTCAAAAAATTGATATTAAATTATGTGCCAGTCA  150

seq1  AATAAGTATATTTTACAGAAAGAAATAAGAAATAGTTTTTTCAGTATGTG  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATAAGTATATTTTACAGAAAGAAATAAGAAATAGTTTTTTCAGTATGTG  200

seq1  AGGAGATTATTAATAATAGCATGGAAAATTTAAAGGAGAAATTAAAACAA  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGAGATTATTAATAATAGCATGGAAAATTTAAAGGAGAAATTAAAACAA  250

seq1  TTTTGTATTTCTTTTTATATCAGAATTAAATATTGAAAGCTTGCTCAAAC  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTTGTATTTCTTTTTATATCAGAATTAAATATTGAAAGCTTGCTCAAAC  300

seq1  TCTCTGTACTAACAGTGTATATCAAAATAATCAGTGAGATATGGTTAATA  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTCTGTACTAACAGTGTATATCAAAATAATCAGTGAGATATGGTTAATA  350

seq1  TTTTGTGGGACTATCAGAAGTAAGCACACTTTGAATAAAGATTTCCACTT  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTTGTGGGACTATCAGAAGTAAGCACACTTTGAATAAAGATTTCCACTT  400

seq1  GAGGAGTGGATCTTTTCTCCAGAGATAGAGTATTTTGTACTATTGCATTC  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGGAGTGGATCTTTTCTCCAGAGATAGAGTATTTTGTACTATTGCATTC  450

seq1  ATTGATGGGAAGTTATCATACATGGACATGGTATTTATATAATAAATTAT  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTGATGGGAAGTTATCATACATGGACATGGTATTTATATAATAAATTAT  500

seq1  TTACTAAACATTATTTGAAATGAACAGCATTACAATCTTTCTAATTAGTT  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTACTAAACATTATTTGAAATGAACAGCATTACAATCTTTCTAATTAGTT  550

seq1  CAAGAACATATTTACATATCCACATTATAGAACATAAAATAACATGAGAG  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAAGAACATATTTACATATCCACATTATAGAACATAAAATAACATGAGAG  600

seq1  GAGACAGAGAAAGAATTAACCCTGCACTTGAATGAAAAAACAAACTATTT  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGACAGAGAAAGAATTAACCCTGCACTTGAATGAAAAAACAAACTATTT  650

seq1  TTGTCGTGAGATTATACCTATTATTAAATTTGGAAAATTATTATTGGAAA  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGTCGTGAGATTATACCTATTATTAAATTTGGAAAATTATTATTGGAAA  700

seq1  TGAAACAAATATGCATATACAATAGATGTAAAGAGTTAATCATGATATAA  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGAAACAAATATGCATATACAATAGATGTAAAGAGTTAATCATGATATAA  750

seq1  TTACTCATAAATTCATAAAAACCTAAGAAATCAGAGAAGTAGGGTTCTGT  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTACTCATAAATTCATAAAAACCTAAGAAATCAGAGAAGTAGGGTTCTGT  800

seq1  GGAAGAGAAATAGAAAATAAAGTGAAAGATGATTGTTTACAGTGTGATTA  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGAAGAGAAATAGAAAATAAAGTGAAAGATGATTGTTTACAGTGTGATTA  850

seq1  ACAAATGTGCTTTTAAATACATACTCAAATATACCTCACATAAACAAAAA  900
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACAAATGTGCTTTTAAATACATACTCAAATATACCTCACATAAACAAAAA  900

seq1  CACTTGTGTCTAAGCCTATCTTAGGATGTTATAACCATTTAAATTTTAAT  950
      |||||||||||||||||||||||||||| |||||||||||||||||||||
seq2  CACTTGTGTCTAAGCCTATCTTAGGATG-TATAACCATTTAAATTTTAAT  949

seq1  AACTAAATATGTAATGAGAAATTCTG-TCCAATGATAACAAACCAAACCA  999
      |||||||||||| ||||| ||||||| ||||||||| ||||||| |||||
seq2  AACTAAATATGT-ATGAG-AATTCTGTTCCAATGAT-ACAAACC-AACCA  995

seq1  AACCAAAACAAAACAAAACAAAAAACCATTCATACTTTAGAAAAGTAGAC  1049
      |||| |||||||||||   | ||||||||||||||||||| ||||| |||
seq2  AACC-AAACAAAACAA---ACAAAACCATTCATACTTTAG-AAAGT-GAC  1039

seq1  AGATATATTAAAACATTTAACTAAATGTTCTCAAAGTTTGTGAGACAATG  1099
       | |||||||||   ||||||| |||||||||||   ||| || || |||
seq2  -GGTATATTAAA--CTTTAACT-AATGTTCTCAA--GTTGGGAAAC-ATG  1082

seq1  AGGAAT  1105
      ||||||
seq2  AGGAAT  1088