BAC Information

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BAC

Clone NameB6Ng01-023F16
Chromosome1 (Build37)
Map Location 131,847,316 - 131,848,313
singlet/doubletsinglet
Overlap geneThsd7b
Upstream geneLOC100042732, LOC100042745, LOC100042740
Downstream geneDaf2, Cd55, Zp3r, C4bp, C4bp-ps1, Pfkfb2, Yod1, AA986860, Fcamr, Pigr, Faim3, Il24, Il20, Il19
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-023F16.bB6Ng01-023F16.g
ACCDH855298DH855299
length9901,223
definitionDH855298|Mus musculus domesticus DNA, BAC clone: B6Ng01-023F16, 5' end.DH855299|Mus musculus domesticus DNA, BAC clone: B6Ng01-023F16, 3' end.
singlet/doubletsinglet---
BLAST hituniqueno hit data
sequence
gaattcaacaggagcaaaactagcactggaggtgcacatctggcaatgat
aagctcatctggcagttaatacagaggtcatccatagactagtaggagct
gccagaagatgggaacaaagaaaaccaaggctgggaccctagaggctcac
ttcacctgacttcacccagggttcttcagtactacatatcctccaagcag
acaacacttactgattttctactttcaatggtactgtggtcttttctctg
tctctcttctaccttcaagttacaatactgagaagagagaatcaatgtct
tcattggtgaaaccttataggtagcagtcagatgaaacggtcatttgcat
atgctacctgtccctaatggagaattggaagaattttagggtagagaata
caaggctcactgagaggagatgatcatgtcgtttgccttgagttgcttcc
aatctgcttatgctgtttcttccattcagaatttcaatgaagtaaaccga
atgaggcaaactggatgcagatgtaactatatttatctgtctcgtcataa
ttttctctctttacaaacaaaaatgcttctaagatactgtagctatgctg
acaataaatctgataaactccctatgttcactgaaagtttttttctttca
ggttacattcaggaagcatgtgtcatcccctgtccgtttgattgcaagct
aagtgactggtccagctggggttcttgcagctcatcttgtgggattggag
tgagaattcgatcaaaatggctaaaagaaaaccttacagtggaggtcggc
catgtcccaaactggatctcaagaatcaggtaaagttatttatgaacaca
cataatgctaaagtctacttgaactatcatcatttctggttgaagatgaa
cttattctcttacagagagcttcattaagttgaaaaaggacagggtagac
actatatagcagagagaggcaaatctttgcctgttcttat
gaattcaaggcccatacctgaacatgataaaaacaatctacagcaaacca
atagccaacatcaaagtaaatggtgagaagctggaagcaatcccactaaa
atcagggactagacaaggctgtccactctcgccctacctattcaacattg
tatttgaagttctagccagagcaattcgacaacaaaaggagatcaagggg
atacaaattggaaaggaagaagtcaaaatatcactttttgcagatgatat
gatagtatatataattgaccctaaaaattccaccagagaactcctaagcc
tgataaacaacttcaatgaagtagctggatataaaattaactcaaacaag
ttaatggcctttctgtacacaatggataaacaggctgagaaagaaattag
ggaaaccacacccttctcaaaagtcacaaataatataaaataccttggcg
tgactctaactaaggaagtcaaaaatctgtatgataagaacttcaagtat
ctgaagaaagaaattaaagaagatctcaggagatggaaagatctcccatg
ctcatggattggcaggatcaatatagtaaaaatggctatcttgccaaaag
caatctacagattcaatgcaatccccatcaaaattccaactcaattcttc
aatgaattagaaagggcaattggcagattcatctggaataacaaaaaacc
taggatagcaaaaactcttctcaaggataaaagaacctctggtggaatca
acatgcccgacctaatgctgtactacagagcaattgtgataaaaactgca
tggtattggtatagtgacagacaagtagaccaatggaacagaattgaaga
ctcagagatgaacccacacacctatggtcactgatctttgacaagggaga
taaaaccattccagtggaaaaagactgcattttcaacaaattgtgctggc
acactggcggtatcatgtagaaaaatgcgaattgatccattctatcactt
gtactacgtcaaatctaagtggataggactcacataaaccgagacactga
acttatgaggagaaagtaggaaagcttgaagattggtacaggcaaattct
gaatgaacgcaatggcttgtgctgtagaatcgaatggataattgaactct
taattgcagcttcgcagccaagaaccatcatagaacaaggccctcacagt
tgggaaggaatttacttatccac
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr1_131847316_131848313
seq2: B6Ng01-023F16.b_46_1035

seq1  GAATTCAACAGGAGCAAAACTAGCACTGGAGGTGCACATCTGGCAATGAT  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCAACAGGAGCAAAACTAGCACTGGAGGTGCACATCTGGCAATGAT  50

seq1  AAGCTCATCTGGCAGTTAATACAGAGGTCATCCATAGACTAGTAGGAGCT  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGCTCATCTGGCAGTTAATACAGAGGTCATCCATAGACTAGTAGGAGCT  100

seq1  GCCAGAAGATGGGAACAAAGAAAACCAAGGCTGGGACCCTAGAGGCTCAC  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCCAGAAGATGGGAACAAAGAAAACCAAGGCTGGGACCCTAGAGGCTCAC  150

seq1  TTCACCTGACTTCACCCAGGGTTCTTCAGTACTACATATCCTCCAAGCAG  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCACCTGACTTCACCCAGGGTTCTTCAGTACTACATATCCTCCAAGCAG  200

seq1  ACAACACTTACTGATTTTCTACTTTCAATGGTACTGTGGTCTTTTCTCTG  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACAACACTTACTGATTTTCTACTTTCAATGGTACTGTGGTCTTTTCTCTG  250

seq1  TCTCTCTTCTACCTTCAAGTTACAATACTGAGAAGAGAGAATCAATGTCT  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTCTCTTCTACCTTCAAGTTACAATACTGAGAAGAGAGAATCAATGTCT  300

seq1  TCATTGGTGAAACCTTATAGGTAGCAGTCAGATGAAACGGTCATTTGCAT  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCATTGGTGAAACCTTATAGGTAGCAGTCAGATGAAACGGTCATTTGCAT  350

seq1  ATGCTACCTGTCCCTAATGGAGAATTGGAAGAATTTTAGGGTAGAGAATA  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGCTACCTGTCCCTAATGGAGAATTGGAAGAATTTTAGGGTAGAGAATA  400

seq1  CAAGGCTCACTGAGAGGAGATGATCATGTCGTTTGCCTTGAGTTGCTTCC  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAAGGCTCACTGAGAGGAGATGATCATGTCGTTTGCCTTGAGTTGCTTCC  450

seq1  AATCTGCTTATGCTGTTTCTTCCATTCAGAATTTCAATGAAGTAAACCGA  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATCTGCTTATGCTGTTTCTTCCATTCAGAATTTCAATGAAGTAAACCGA  500

seq1  ATGAGGCAAACTGGATGCAGATGTAACTATATTTATCTGTCTCGTCATAA  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGAGGCAAACTGGATGCAGATGTAACTATATTTATCTGTCTCGTCATAA  550

seq1  TTTTCTCTCTTTACAAACAAAAATGCTTCTAAGATACTGTAGCTATGCTG  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTTCTCTCTTTACAAACAAAAATGCTTCTAAGATACTGTAGCTATGCTG  600

seq1  ACAATAAATCTGATAAACTCCCTATGTTCACTGAAAGTTTTTTTCTTTCA  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACAATAAATCTGATAAACTCCCTATGTTCACTGAAAGTTTTTTTCTTTCA  650

seq1  GGTTACATTCAGGAAGCATGTGTCATCCCCTGTCCGTTTGATTGCAAGCT  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGTTACATTCAGGAAGCATGTGTCATCCCCTGTCCGTTTGATTGCAAGCT  700

seq1  AAGTGACTGGTCCAGCTGGGGTTCTTGCAGCTCATCTTGTGGGATTGGAG  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGTGACTGGTCCAGCTGGGGTTCTTGCAGCTCATCTTGTGGGATTGGAG  750

seq1  TGAGAATTCGATCAAAATGGCTAAAAGAAAAACCTTACAGTGGAGGTCGG  800
      ||||||||||||||||||||||||||| ||||||||||||||||||||||
seq2  TGAGAATTCGATCAAAATGGCTAAAAG-AAAACCTTACAGTGGAGGTCGG  799

seq1  CCATGTCCCAAACTGGATCTCAAGAATCAGGTAAAGTGAATTTATGAACA  850
      |||||||||||||||||||||||||||||||||||||  |||||||||||
seq2  CCATGTCCCAAACTGGATCTCAAGAATCAGGTAAAGT-TATTTATGAACA  848

seq1  CACATAATGCTAAAGTCTACTTGAACTATCATCATTTCTGGTTGAAGATG  900
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CACATAATGCTAAAGTCTACTTGAACTATCATCATTTCTGGTTGAAGATG  898

seq1  AACTTATTCTCTTACAGAGAGCTTCATAAAGTTGAAAAAAGAACAAGGGT  950
      ||||||||||||||||||||||||||| ||||||||||| ||   |||||
seq2  AACTTATTCTCTTACAGAGAGCTTCATTAAGTTGAAAAAGGA--CAGGGT  946

seq1  AGACACTAATATAGCAGAAGAAGAGGCAAAACCTTTGCCTGGTCTTAT  998
      ||||||| ||||||||||   |||||| ||| ||||||||| ||||||
seq2  AGACACT-ATATAGCAGA--GAGAGGC-AAATCTTTGCCTGTTCTTAT  990