BAC Information

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BAC

Clone NameB6Ng01-023K24
Chromosome1 (Build37)
Map Location 98,186,062 - 98,187,262
singlet/doubletsinglet
Overlap genenone
Upstream geneTmem157, LOC100041686, Rnu7-ps2, St8sia4
Downstream geneGm1833, Slco4c1, EG329217, Slco6b1, LOC670708, LOC623430, Slco6c1, EG634331
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-023K24.bB6Ng01-023K24.g
ACCDH855535DH855536
length1,1511,200
definitionDH855535|Mus musculus domesticus DNA, BAC clone: B6Ng01-023K24, 5' end.DH855536|Mus musculus domesticus DNA, BAC clone: B6Ng01-023K24, 3' end.
singlet/doublet---singlet
BLAST hitno hit dataunique
sequence
gaattctcacctgaggaataccaaatggctgagaagcacctgaagaaatg
ttaaacatccttaaccatcagggaaatgcaaattaaaactaccctgagat
tccacctcataccagtcagaatggctaagagaaaaaattcaggtgacagc
agatgctgatgaggatgtggaaaaagaggaacactcctccatttttggtg
ggattgcaagcatgtacaaccactctggaaataagtctgtcagttcctca
aaaaattggacatagtactacctgaggatcccaaaatacctctcctgggc
atatatccagaagatctcccaacttgtaagaaggacacatgctccactat
gtacatagcagccttatttataatagccagaacctggaaagaacccagat
gcccctcaacagaggaatggatacagaaaatgtggtacatttacacaatg
gagtactactcagctattaaaaagaatgaatttatgaaattcctaggcaa
atggatggacctggacagcatcatccttagtgagtaactcaatcacaaaa
gagctcttatgatatgtactcactgataagtggatattagcccagaaact
tagaatacccaagatataagatacaatttgcaaaactcgtgaagcttggg
aagaacgaagacaaaggtgtggacactttgcaccttcttggaattcggac
caaaacacccatggaaggagttacagagacaaagtttggagctgagagga
aaggatggaccatctagagactgacatacctggagatccatcccataatc
agcctccaaacgctgaccccattgcatacactagcaagattttgctgtaa
ggaccctgatatagctatctcttgtgagactatgcagggcctagcaaaca
cagaagtggatgctcacagtcagctattgatggatcacagggccccaatg
gagagctcgaggagtaccagagagctgggggatctgaaacctatagtgga
cacatatgataccagtacctacctcccctcagactctgtctctagctgca
ttgtatcagagatgctgatggcatattgaaagaaagccatgcttgcaact
tgttgcttcgatataggaacccaggctaaagtgtgaatgggtcgtgtgag
a
gaattcttcattctttctttcttagatctttttctttaagaattaataat
attttgtttaaagagggtcaatgaatttacagataatttttatgtgaatt
tatagggaaaggttacagattcaattttatttctagtaattttatatggt
actttattccaaaaaaattctgtttttatatttatggttattttgaattt
tataacatattactgattatattcttgatatttgaaaaatcatgtttttg
aatggacagatttgtctttttcttcttgattgagtattcatgtctctgat
ttcttatgtgtttactaatctatgtagcaggtttgctacaaaaattgcca
atatcaaaatcactttgttctatttttctgagaagaaatatatgcaaatc
acattttctaaattggcagaattaggctgaaaatgctgataaatcaatct
tattttctcaactgaaatgataacactagttttcacatgaacgaactttt
gatagagattaaataaataatgtatattgcttttgtatctattatatgaa
gatttatttccatgccattattaatataaacaacagataattttgaaata
aagttataccatgtgattttttttcctctccttgttcctaggctgaggta
tgtgccacatatgttacagatggctgtagttaataacatcttcagtgcct
gtaatatcatttataatctcgtacatttttactgattttttcataattta
aaacataaagcagctacatgtgggcaagcatgattctgtcaccattagta
tttcttttactaaagagcaatttctagtcaactttgggaagtgatgcagg
gcagagataatgaaagctgacaatctagttatcatcttatttacatattg
cactatatgagtgatttcagcaacttcctaaattttcacatattaggatt
tcttagtggtactttgaagatggtattggggactacagcacagagcacac
tttggggatcgattattactaaaggtgcttctaagctctatatggtgtgt
tttcacagtactttaaaaataaacctacttttccttctcaaggtatataa
tgcagaacagcgagcatgacaaggtggacaggtcgtttggtctctggcga
atattcctataaatacacgacagaatatttggtaaacttaatggcctgaa

quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr1_98186062_98187262
seq2: B6Ng01-023K24.g_67_1266 (reverse)

seq1  TTCAGACCATTACATTTTACAAAATATTCTGTCTGTGTATTTTATAGGAA  50
      ||||| |||||| | ||||| |||||||||||| ||||| ||||||||||
seq2  TTCAGGCCATTA-AGTTTACCAAATATTCTGTC-GTGTA-TTTATAGGAA  47

seq1  TATTTTGGCAGAG-CCAAACTGACCTGTCCACTTTGTCATGCTCGCTG-T  98
      || || | ||||| |||||| ||||||||||| ||||||||||||||| |
seq2  TA-TTCGCCAGAGACCAAAC-GACCTGTCCACCTTGTCATGCTCGCTGTT  95

seq1  CTGCATTTATTACCTTGAGAAGGAAAGGTTAGTTTTATTTTTAAAGTACT  148
      |||||||   |||||||||||||||| | ||| |||||||||||||||||
seq2  CTGCATTATATACCTTGAGAAGGAAAAG-TAGGTTTATTTTTAAAGTACT  144

seq1  GTGATAACACA-CATATAGAGCTTAGAAGCA-CTTTAGTAATAATCGATC  196
      |||| |||||| ||||||||||||||||||| ||||||||||||||||||
seq2  GTGAAAACACACCATATAGAGCTTAGAAGCACCTTTAGTAATAATCGATC  194

seq1  CCC-AAGTGTGCTCTGTGCTGTAGTCCCCAATACCATCTTCAAAGTACCA  245
      ||| ||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCCAAAGTGTGCTCTGTGCTGTAGTCCCCAATACCATCTTCAAAGTACCA  244

seq1  CTAAGAAAT-CTAATATGTGAAAAATTTAGGAAGTTGCTGAAATCACTCA  294
      ||||||||| |||||||||| |||||||||||||||||||||||||||||
seq2  CTAAGAAATCCTAATATGTG-AAAATTTAGGAAGTTGCTGAAATCACTCA  293

seq1  TATAGTGCAATATGTAAATAAGATGATAACTAGATTGTCAGCTTTCATTA  344
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATAGTGCAATATGTAAATAAGATGATAACTAGATTGTCAGCTTTCATTA  343

seq1  TCTCTGCCCTGCATCACTTCCCAAAGTTGACTAGAAATTGCTCTTTAGTA  394
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTCTGCCCTGCATCACTTCCCAAAGTTGACTAGAAATTGCTCTTTAGTA  393

seq1  AAAGAAATACTAATGGTGACAGAATCATGCTTGCCCACATGTAGCTGCTT  444
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAGAAATACTAATGGTGACAGAATCATGCTTGCCCACATGTAGCTGCTT  443

seq1  TATGTTTTAAATTATGAAAAAATCAGTAAAAATGTACGAGATTATAAATG  494
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATGTTTTAAATTATGAAAAAATCAGTAAAAATGTACGAGATTATAAATG  493

seq1  ATATTACAGGCACTGAAGATGTTATTAACTACAGCCATCTGTAACATATG  544
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATATTACAGGCACTGAAGATGTTATTAACTACAGCCATCTGTAACATATG  543

seq1  TGGCACATACCTCAGCCTAGGAACAAGGAGAGGAAAAAAAATCACATGGT  594
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGCACATACCTCAGCCTAGGAACAAGGAGAGGAAAAAAAATCACATGGT  593

seq1  ATAACTTTATTTCAAAATTATCTGTTGTTTATATTAATAATGGCATGGAA  644
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATAACTTTATTTCAAAATTATCTGTTGTTTATATTAATAATGGCATGGAA  643

seq1  ATAAATCTTCATATAATAGATACAAAAGCAATATACATTATTTATTTAAT  694
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATAAATCTTCATATAATAGATACAAAAGCAATATACATTATTTATTTAAT  693

seq1  CTCTATCAAAAGTTCGTTCATGTGAAAACTAGTGTTATCATTTCAGTTGA  744
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCTATCAAAAGTTCGTTCATGTGAAAACTAGTGTTATCATTTCAGTTGA  743

seq1  GAAAATAAGATTGATTTATCAGCATTTTCAGCCTAATTCTGCCAATTTAG  794
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAAAATAAGATTGATTTATCAGCATTTTCAGCCTAATTCTGCCAATTTAG  793

seq1  AAAATGTGATTTGCATATATTTCTTCTCAGAAAAATAGAACAAAGTGATT  844
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAATGTGATTTGCATATATTTCTTCTCAGAAAAATAGAACAAAGTGATT  843

seq1  TTGATATTGGCAATTTTTGTAGCAAACCTGCTACATAGATTAGTAAACAC  894
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGATATTGGCAATTTTTGTAGCAAACCTGCTACATAGATTAGTAAACAC  893

seq1  ATAAGAAATCAGAGACATGAATACTCAATCAAGAAGAAAAAGACAAATCT  944
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATAAGAAATCAGAGACATGAATACTCAATCAAGAAGAAAAAGACAAATCT  943

seq1  GTCCATTCAAAAACATGATTTTTCAAATATCAAGAATATAATCAGTAATA  994
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTCCATTCAAAAACATGATTTTTCAAATATCAAGAATATAATCAGTAATA  993

seq1  TGTTATAAAATTCAAAATAACCATAAATATAAAAACAGAATTTTTTTGGA  1044
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTTATAAAATTCAAAATAACCATAAATATAAAAACAGAATTTTTTTGGA  1043

seq1  ATAAAGTACCATATAAAATTACTAGAAATAAAATTGAATCTGTAACCTTT  1094
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATAAAGTACCATATAAAATTACTAGAAATAAAATTGAATCTGTAACCTTT  1093

seq1  CCCTATAAATTCACATAAAAATTATCTGTAAATTCATTGACCCTCTTTAA  1144
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCCTATAAATTCACATAAAAATTATCTGTAAATTCATTGACCCTCTTTAA  1143

seq1  ACAAAATATTATTAATTCTTAAAGAAAAAGATCTAAGAAAGAAAGAATGA  1194
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACAAAATATTATTAATTCTTAAAGAAAAAGATCTAAGAAAGAAAGAATGA  1193

seq1  AGAATTC  1201
      |||||||
seq2  AGAATTC  1200