BAC Information

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BAC

Clone NameB6Ng01-024B23
Chromosome1 (Build37)18 (Build37)
Map Location 102,143,434 - 102,144,54010,910,113 - 10,910,188
singlet/doubletsingletsinglet
Overlap geneC230078M14Rik
Upstream geneLOC633295, EG666200
Downstream genenone
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-024B23.bB6Ng01-024B23.g
ACCDH855851DH855852
length1,107332
definitionDH855851|Mus musculus domesticus DNA, BAC clone: B6Ng01-024B23, 5' end.DH855852|Mus musculus domesticus DNA, BAC clone: B6Ng01-024B23, 3' end.
singlet/doubletsingletsinglet
BLAST hituniqueunique
Map location.(102,143,434 - 102,144,540)(10,910,113 - 10,910,188)
sequence
gaattctctcctttcttaagagataatacagttgggctgggcaattatct
ggttatgggactaagcctcaggaagtcaggtgcttaaactatgctaagca
tataaagggtttattttattaatcattttatttgtttacatttcaaatag
ctcccttcccagttacccgtccacaaacccccatctcatccctcctctct
ctcctccccttgtcctctatgagggtgctcctccacctactcacccactc
ctgcctcactgctttagcatcccctatgctgtggcatcaagcctccacag
gaccaagggtctccagaattgttttttttttttttttttttttttagata
attctcctttctagaatgcctactccctcaagcagttcctgtgaggtacc
ctgaggtttttctgggtctgtgggaatatttgtgttctgaataagaaact
tgtcattttccttcttttccgcaattctttattggatgttgccagagcct
aagtgtgctctccctggtaaccaggctttcttcctctttctcagaagatc
ccctccacaccatgtagccacatgccacagtatgggtaacctccatgcct
gcttacctgaaacagaatgtcacttcccaccaccaccaccacctttatat
tttcaattctcttgtgagcagctactgataattttcagcttgctttcctt
agtggtttcctttttaactctaataaaatttacctcaaatgttccattga
gtccattcttaaattattctattatggagacaaagaatcccaagaaggca
tctacactttcctggtatcatctgccgaccacaaagaaatttctctcaaa
tgaccagtaatactacatgcatgcctgttcattgatatgcttgtgtttgc
aatcacatgtacatatggagacaaagttggatatatttacagtcactctt
caaatttattttgaggtagggactctcactgagcctgaaggtctcattca
gctggcattacaagcacaacactgaaaacacacgctttgtatatgggttc
tagcaatacaggatgataagcacactttaattataagcaatttcttcagc
catacca
gaattcagagactttctagaattcaatgaaaatgaaggtacaatgtacct
aaaataatgggaaatgatggaagcagtgctaacaggaaacttcacagtaa
taagtgcctccagaaagaaatttgagaattctcatattacaaatttaaaa
ctacacttgaaagctctaggaggaggagggaaaaagacacactaaaaagt
gatagagggcaaaagacaatcaaattcagtgatgagatcaatcaactaga
aataaggagaacaatacaaagaatcaacaaacccaagtattgtttattct
aaaaatcaataatatagacaaacccttagcca
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr1_102143434_102144540
seq2: B6Ng01-024B23.b_42_1148

seq1  GAATTCTCTCCTTTCTTAAGAGATAATACAGTTGGGCTGGGCAATTATCT  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCTCTCCTTTCTTAAGAGATAATACAGTTGGGCTGGGCAATTATCT  50

seq1  GGTTATGGGACTAAGCCTCAGGAAGTCAGGTGCTTAAACTATGCTAAGCA  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGTTATGGGACTAAGCCTCAGGAAGTCAGGTGCTTAAACTATGCTAAGCA  100

seq1  TATAAAGGGTTTATTTTATTAATCATTTTATTTGTTTACATTTCAAATAG  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATAAAGGGTTTATTTTATTAATCATTTTATTTGTTTACATTTCAAATAG  150

seq1  CTCCCTTCCCAGTTACCCGTCCACAAACCCCCATCTCATCCCTCCTCTCT  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCCCTTCCCAGTTACCCGTCCACAAACCCCCATCTCATCCCTCCTCTCT  200

seq1  CTCCTCCCCTTGTCCTCTATGAGGGTGCTCCTCCACCTACTCACCCACTC  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCCTCCCCTTGTCCTCTATGAGGGTGCTCCTCCACCTACTCACCCACTC  250

seq1  CTGCCTCACTGCTTTAGCATCCCCTATGCTGTGGCATCAAGCCTCCACAG  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGCCTCACTGCTTTAGCATCCCCTATGCTGTGGCATCAAGCCTCCACAG  300

seq1  GACCAAGGGTCTCCAGAATTGTTTTTTTTTTTTTTTTTTTTTTTTAGATA  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GACCAAGGGTCTCCAGAATTGTTTTTTTTTTTTTTTTTTTTTTTTAGATA  350

seq1  ATTCTCCTTTCTAGAATGCCTACTCCCTCAAGCAGTTCCTGTGAGGTACC  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTCTCCTTTCTAGAATGCCTACTCCCTCAAGCAGTTCCTGTGAGGTACC  400

seq1  CTGAGGTTTTTCTGGGTCTGTGGGAATATTTGTGTTCTGAATAAGAAACT  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGAGGTTTTTCTGGGTCTGTGGGAATATTTGTGTTCTGAATAAGAAACT  450

seq1  TGTCATTTTCCTTCTTTTCCGCAATTCTTTATTGGATGTTGCCAGAGCCT  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTCATTTTCCTTCTTTTCCGCAATTCTTTATTGGATGTTGCCAGAGCCT  500

seq1  AAGTGTGCTCTCCCTGGTAACCAGGCTTTCTTCCTCTTTCTCAGAAGATC  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGTGTGCTCTCCCTGGTAACCAGGCTTTCTTCCTCTTTCTCAGAAGATC  550

seq1  CCCTCCACACCATGTAGCCACATGCCACAGTATGGGTAACCTCCATGCCT  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCCTCCACACCATGTAGCCACATGCCACAGTATGGGTAACCTCCATGCCT  600

seq1  GCTTACCTGAAACAGAATGTCACTTCCCACCACCACCACCACCTTTATAT  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCTTACCTGAAACAGAATGTCACTTCCCACCACCACCACCACCTTTATAT  650

seq1  TTTCAATTCTCTTGTGAGCAGCTACTGATAATTTTCAGCTTGCTTTCCTT  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTCAATTCTCTTGTGAGCAGCTACTGATAATTTTCAGCTTGCTTTCCTT  700

seq1  AGTGGTTTCCTTTTTAACTCTAATAAAATTTACCTCAAATGTTCCATTGA  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTGGTTTCCTTTTTAACTCTAATAAAATTTACCTCAAATGTTCCATTGA  750

seq1  GTCCATTCTTAAATTATTCTATTATGGAGACAAAGAATCCCAAGAAGGCA  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTCCATTCTTAAATTATTCTATTATGGAGACAAAGAATCCCAAGAAGGCA  800

seq1  TCTACACTTTCCTGGTATCATCTGCCGACCACAAAGAAATTTCTCTCAAA  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTACACTTTCCTGGTATCATCTGCCGACCACAAAGAAATTTCTCTCAAA  850

seq1  TGACCAGTAATACTACATGCATGCCTGTTCATTGATATGCTTGTGTTTGC  900
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGACCAGTAATACTACATGCATGCCTGTTCATTGATATGCTTGTGTTTGC  900

seq1  AATCACATGTACATATGGAGACAAAAGTTGGATATAATTTACAGTCACTC  950
      |||||||||||||||||||||| |||||||||||| ||||||||||||||
seq2  AATCACATGTACATATGGAGAC-AAAGTTGGATAT-ATTTACAGTCACTC  948

seq1  -TCAAATTTATTTTGAGGTAGGGACTCTCACTGAGCCTGGAGGTCTCCAT  999
       |||||||||||||||||||||||||||||||||||||| |||||| |||
seq2  TTCAAATTTATTTTGAGGTAGGGACTCTCACTGAGCCTGAAGGTCT-CAT  997

seq1  TCAGCTGGCATTACAGGCAC-ACACTGGAACAACACAGCTTTGTATATGG  1048
      ||||||||||||||| |||| |||||| ||  |||| |||||||||||||
seq2  TCAGCTGGCATTACAAGCACAACACTGAAAACACAC-GCTTTGTATATGG  1046

seq1  GTCCTAGCAATACAGGTATGATAAG--CACTCTAATTAT-AGCAATCTCT  1095
      || ||||||||||||| ||||||||  |||| ||||||| |||||| |||
seq2  GTTCTAGCAATACAGG-ATGATAAGCACACTTTAATTATAAGCAATTTCT  1095

seq1  TCAGCCATACCA  1107
      ||||||||||||
seq2  TCAGCCATACCA  1107

seq1: chr18_10910113_10910188
seq2: B6Ng01-024B23.g_325_399 (reverse)

seq1  TGGCTAAGGGTTTGTCTATCTTGTTGATTTTCTCAAAGAAGCAGCTCCTG  50
      ||||||||||||||||||| || |||||||| |  || || ||   | ||
seq2  TGGCTAAGGGTTTGTCTATATTATTGATTTT-TAGAATAAACAATACTTG  49

seq1  CTTTTGTTGATTCTTTGTATAGTTCT  76
        |||||||||||||||||| |||||
seq2  GGTTTGTTGATTCTTTGTATTGTTCT  75