BAC Information

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BAC

Clone NameB6Ng01-024D24
Chromosome1 (Build37)
Map Location 124,234,457 - 124,235,481
singlet/doubletsinglet
Overlap genenone
Upstream geneCcdc93, LOC100041926, Htr5b, LOC666656, Ddx18, LOC666971
Downstream geneLOC666983, Dpp10
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-024D24.bB6Ng01-024D24.g
ACCDH855945DH855946
length1,1441,020
definitionDH855945|Mus musculus domesticus DNA, BAC clone: B6Ng01-024D24, 5' end.DH855946|Mus musculus domesticus DNA, BAC clone: B6Ng01-024D24, 3' end.
singlet/doublet---singlet
BLAST hitno hit dataunique
sequence
gaattctttgttcagttctgagccccattttttaatggggttatttgatt
ttctgaagtccaccttcttgagttctttatatatgttggatattagtccc
ctatctgatttaggataggtaaagatcctttcccaatctgttggtggtct
ttttgtcttattgacggtgtcttttgccttgcagaaactttggagtttca
ttaggtcccatttgtcaattctcgatcttacagcacaagccattgctgtt
ctgttcaggaatttttcccctctgcccatatcttcaaggctttttcccac
tttctcctctataagtttcagtgtctctggttttatgtgaagttccttga
tccacttagatttgaccttagtacaaggagataagtatggatcgattcgc
attcttctacacgataacaaccagttgtgccagcaccaattgttgaaaat
gctgtctttcttccactggatggttttagctcccttgtcgaagatcaagt
gaccataggtgtgtgggttcatttctgggtcttcaattctattccattgg
tctacttgtctgtctctataccagtaccatgcagtttttatcacaattgc
tctgtagtaaagctttaggtctggcatggtgattccgccagaagttcttc
tatccttgagaagactttttgctatcctaggatttttgttattccagaca
aatttgcaaattgctccttccaattcgttgaagaattgagttggaatttt
gatggggattgcattgaatctgtagattgcttttggcaagatagccattt
ttacaatgttgatcctgccaatccatgagcatgggagatctttccatctt
ctgagatcttccttaatttctttcttcagagattgaagtttttatcatac
agatctttcacttcctgagtagagtccgccaagatatttatattatttgt
gactatgagaaggtgttgttcccttatttctttctcaggctgtttattct
ttgtatgaaaaatgccatggactgtgcttgaaattattttataatcaagc
atctccactgaagctgttatcaggtttagaagtcccggctaaatttagag
ttcctataataggatatatcatctgcgaaaaggtattatgggtc
gaattcaaagaaatgtctggaaagagtagagaagagaattttctatgaaa
tgaggaactgttaatgtgacaagcaaggctccttgtgaacaagggatgaa
aggtcagagcccacaatagagttccttctattgctgtgctaaaacaccat
gacccaaagcaacttgggatgagttggcttagatatttggcttagatatt
ttgaatcacagttcatcttgggaaaccaaggcagatactcaaggctggat
ctgaagcagagaccatacaacagtgattctcaagcttccttttaatacag
tttctcatgctgtggtaacccacaaccaataaacttttctttgctacttc
ataatgtagctttgttactgttttgaatcataatgtaaatatctgtgttt
tcctgatggacttagatgatggttataaaagattcaacccacaggttgag
aagcacagccatgaaggaatgcttcttacttgcttgctccccatggcttg
ctcagcctgccattgtatacaactgtgacaccagttcatgtgtgtcaata
ggctcagtgagatgggtcctctcccatcactttcaatgaaatgtatgcct
acagacagtctaatagaagcattttcttaactgatgatttccttcccaga
tctgttcaggtttgtgtcaaactgacaaaaaccacaaccagtaaagactg
acatgtgtctacagctcagtgtcacttccattgaaatatttcatttacat
gtcttcatttaggaaacacttgaggaatgggaatgaaaggaaaggagaaa
gtggcaaccagtagaagaacagaggaaagaaagaaacgggcagtggatgc
agagatatgagtcgttagaaataagagagtatgtgacttcaaaaatgtaa
acccttttgctgaatgtctgatgtgcattgtatgttgtgagagtataatg
tgcacatacatgggcatgggtgcactctctgggtgcctatgagtatggta
tttgtttatgttgttacctg
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr1_124234457_124235481
seq2: B6Ng01-024D24.g_67_1086

seq1  GAATTCAAAGAAATGTCTGGAAAGAGTAGAGAAGAGAATTTTCTATGAAA  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCAAAGAAATGTCTGGAAAGAGTAGAGAAGAGAATTTTCTATGAAA  50

seq1  TGAGGAACTGTTAATGTGACAAGCAAGGCTCCTTGTGAACAAGGGATGAA  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGAGGAACTGTTAATGTGACAAGCAAGGCTCCTTGTGAACAAGGGATGAA  100

seq1  AGGTCAGAGCCCACAATAGAGTTCCTTCTATTGCTGTGCTAAAACACCAT  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGTCAGAGCCCACAATAGAGTTCCTTCTATTGCTGTGCTAAAACACCAT  150

seq1  GACCCAAAGCAACTTGGGATGAGTTGGCTTAGATATTTGGCTTAGATATT  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GACCCAAAGCAACTTGGGATGAGTTGGCTTAGATATTTGGCTTAGATATT  200

seq1  TTGAATCACAGTTCATCTTGGGAAACCAAGGCAGATACTCAAGGCTGGAT  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGAATCACAGTTCATCTTGGGAAACCAAGGCAGATACTCAAGGCTGGAT  250

seq1  CTGAAGCAGAGACCATACAACAGTGATTCTCAAGCTTCCTTTTAATACAG  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGAAGCAGAGACCATACAACAGTGATTCTCAAGCTTCCTTTTAATACAG  300

seq1  TTTCTCATGCTGTGGTAACCCACAACCAATAAACTTTTCTTTGCTACTTC  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTCTCATGCTGTGGTAACCCACAACCAATAAACTTTTCTTTGCTACTTC  350

seq1  ATAATGTAGCTTTGTTACTGTTTTGAATCATAATGTAAATATCTGTGTTT  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATAATGTAGCTTTGTTACTGTTTTGAATCATAATGTAAATATCTGTGTTT  400

seq1  TCCTGATGGACTTAGATGATGGTTATAAAAGATTCAACCCACAGGTTGAG  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCCTGATGGACTTAGATGATGGTTATAAAAGATTCAACCCACAGGTTGAG  450

seq1  AAGCACAGCCATGAAGGAATGCTTCTTACTTGCTTGCTCCCCATGGCTTG  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGCACAGCCATGAAGGAATGCTTCTTACTTGCTTGCTCCCCATGGCTTG  500

seq1  CTCAGCCTGCCATTGTATACAACTGTGACACCAGTTCATGTGTGTCAATA  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCAGCCTGCCATTGTATACAACTGTGACACCAGTTCATGTGTGTCAATA  550

seq1  GGCTCAGTGAGATGGGTCCTCTCCCATCACTTTCAATGAAATGTATGCCT  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGCTCAGTGAGATGGGTCCTCTCCCATCACTTTCAATGAAATGTATGCCT  600

seq1  ACAGACAGTCTAATAGAAGCATTTTCTTAACTGATGATTTCCTTCCCAGA  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACAGACAGTCTAATAGAAGCATTTTCTTAACTGATGATTTCCTTCCCAGA  650

seq1  TCTGTTCAGGTTTGTGTCAAACTGACAAAAACCACAACCAGTAAAGACTG  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTGTTCAGGTTTGTGTCAAACTGACAAAAACCACAACCAGTAAAGACTG  700

seq1  ACATGTGTCTACAGCTCAGTGTCACTTCCATTGAAATATTTCATTTACAT  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACATGTGTCTACAGCTCAGTGTCACTTCCATTGAAATATTTCATTTACAT  750

seq1  GTCTTCATTTAGGAAACACTTGAGGAATGGGAATGAAAGGAAAGGAGAAA  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTCTTCATTTAGGAAACACTTGAGGAATGGGAATGAAAGGAAAGGAGAAA  800

seq1  GTGGCAACCAGTAGAAGAACAGAGGAAAGAAAGAAACGGGCAGTGGATGC  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTGGCAACCAGTAGAAGAACAGAGGAAAGAAAGAAACGGGCAGTGGATGC  850

seq1  AGAGATATGAGTCGTTAGAAATAAGAGAGTATGTGACTTCATAAAATGTA  900
      ||||||||||||||||||||||||||||||||||||||||| ||||||||
seq2  AGAGATATGAGTCGTTAGAAATAAGAGAGTATGTGACTTCA-AAAATGTA  899

seq1  AACCCTTTTGCTGAATGTCTGAATGTGCATATGTATG-TGTGAGAGTAT-  948
      ||||||||||||||||||||| |||||||| |||||| ||||||||||| 
seq2  AACCCTTTTGCTGAATGTCTG-ATGTGCAT-TGTATGTTGTGAGAGTATA  947

seq1  ATGTGCACATACATGGGCATGTGTGCACCTCTCTGGGTGCCTATGAGTAT  998
      ||||||||||||||||||||| ||||| ||||||||||||||||||||||
seq2  ATGTGCACATACATGGGCATGGGTGCA-CTCTCTGGGTGCCTATGAGTAT  996

seq1  ATGTATATGTTTATGTTTGTGTACCTG  1025
        |||| |||||||| |||| ||||||
seq2  -GGTATTTGTTTATG-TTGT-TACCTG  1020