BAC Information

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BAC

Clone NameB6Ng01-024F02
Chromosome1 (Build37)
Map Location 15,398,441 - 15,399,505
singlet/doubletsinglet
Overlap geneKcnb2
Upstream geneLOC665391, Msc, Smt3h2-ps4, EG665407, Trpa1, EG269105, LOC100039949, LOC100039959
Downstream genePpia-ps1_109.1, Terf1, Gm106, LOC665434, 4930444P10Rik, Rpl7, Rdh10, EG665282, Stau2
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-024F02.bB6Ng01-024F02.g
ACCDH855989DH855990
length978639
definitionDH855989|Mus musculus domesticus DNA, BAC clone: B6Ng01-024F02, 5' end.DH855990|Mus musculus domesticus DNA, BAC clone: B6Ng01-024F02, 3' end.
singlet/doubletsinglet---
BLAST hituniqueno hit data
sequence
gaattctttcctcaggggaaatcatcactcaaagactctgtgaggtcttt
tcatgttttcccaatgtaccccactcctgacatcagggacataatgtgtt
tcccaaaacatttaagcacttccatgataagttttatctagtgtgaccct
ttatataagttactggagtttctctcagccaacagctctcaaatggtgac
tctgagtttttctttcaagggaaatgagctaaccttgataataatcagtg
atttatttgactttttcctgaaagaattttgtctttagtttttacatgca
tgactgatcttgtcatcagccacgggtacgtttgcctctgtttttatgag
ttcgactcaatagatctttgttgaatattcatttctttttttataatgca
gtagaaataggacttgaagtttctactagtatttttttatcttctttttg
atgtttttctaattgcaagatagctttcacagtttagagatgaagtgcat
aaattattttcctcagttaatttactacatatgtgatttcttttcatttt
ctaaaatatttgtttgacttggctccatcacaggggtctcgaaacctttt
ttggatttccattctaagagttcttcattctctaccaccagccactgtcc
ttttcttcaaggaagattctggtctttgggaagaagtcctccagaggcct
cctttgactttgacatttaaagttgtcctgtaaagactttagctcatttt
gtactgtttggtcacagcccttccaagcctcattctcatttggaagcaga
atcctgcttcctgtcgcctgccctcacggtgctgcctgcagttctgtttt
tctgatgtgtgctgaagagagttttcatctcagctggttgagtggcatgt
aggatgatacatcttgtgatgatgcgatctttcttgcactctcagccatt
agctttctttgtttcaatgtttagagtc

gaattcacattatatgtactcactgataattggatatcagtccagaaact
tagaatagccaagatacaagatacaattttctaaacacatgaaactgaag
aagaatgaagaccaatgtgtggacactttcccccttcttagaattgggaa
caaaacacccatggaacgagttacagagacaatgtttggagctgagacga
aaagatggaccatctagagactgccatacctggggatccatcccatcatc
ggcttccaaaagctgacaccattggatatactagcaagattttgctgaaa
ggaccctgatataggtgtcttttgtgaggctatgcaggggcctaacaaac
acagaagtggatgttcacaatctgctattggatggatcacagggtcccca
gtgtaggagctataaaaagtacccaaggagctaaaggggcctgtaaccgt
atatgtggaacaacaatatgaactaaccagtacccctggagctcatttct
ctagctgcatatgaatcagaagatggcctagtcggccatcattggaaaga
gaggcccattggtcttgcaaactttatatgcctcagtataggggaacacc
agggccaagaagtgggagtaggtagataggggagtgtag
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr1_15398441_15399505
seq2: B6Ng01-024F02.b_43_1100

seq1  GAATTCTTTCCTCAGGGGAAATCATCACTCAAAGACTCTGTGAGGTCTTT  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCTTTCCTCAGGGGAAATCATCACTCAAAGACTCTGTGAGGTCTTT  50

seq1  TCATGTTTTCCCAATGTACCCCACTCCTGACATCAGGGACATAATGTGTT  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCATGTTTTCCCAATGTACCCCACTCCTGACATCAGGGACATAATGTGTT  100

seq1  TCCCAAAACATTTAAGCACTTCCATGATAAGTTTTATCTAGTGTGACCCT  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCCCAAAACATTTAAGCACTTCCATGATAAGTTTTATCTAGTGTGACCCT  150

seq1  TTATATAAGTTACTGGAGTTTCTCTCAGCCAACAGCTCTCAAATGGTGAC  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTATATAAGTTACTGGAGTTTCTCTCAGCCAACAGCTCTCAAATGGTGAC  200

seq1  TCTGAGTTTTTCTTTCAAGGGAAATGAGCTAACCTTGATAATAATCAGTG  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTGAGTTTTTCTTTCAAGGGAAATGAGCTAACCTTGATAATAATCAGTG  250

seq1  ATTTATTTGACTTTTTCCTGAAAGAATTTTGTCTTTAGTTTTTACATGCA  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTTATTTGACTTTTTCCTGAAAGAATTTTGTCTTTAGTTTTTACATGCA  300

seq1  TGACTGATCTTGTCATCAGCCACGGGTACGTTTGCCTCTGTTTTTATGAG  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGACTGATCTTGTCATCAGCCACGGGTACGTTTGCCTCTGTTTTTATGAG  350

seq1  TTCGACTCAATAGATCTTTGTTGAATATTCATTTCTTTTTTTATAATGCA  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCGACTCAATAGATCTTTGTTGAATATTCATTTCTTTTTTTATAATGCA  400

seq1  GTAGAAATAGGACTTGAAGTTTCTACTAGTATTTTTTTATCTTCTTTTTG  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTAGAAATAGGACTTGAAGTTTCTACTAGTATTTTTTTATCTTCTTTTTG  450

seq1  ATGTTTTTCTAATTGCAAGATAGCTTTCACAGTTTAGAGATGAAGTGCAT  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGTTTTTCTAATTGCAAGATAGCTTTCACAGTTTAGAGATGAAGTGCAT  500

seq1  AAATTATTTTCCTCAGTTAATTTACTACATATGTGATTTCTTTTCATTTT  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAATTATTTTCCTCAGTTAATTTACTACATATGTGATTTCTTTTCATTTT  550

seq1  CTAAAATATTTGTTTGACTTGGCTCCATCACAGGGGTCTCGAAACCTTTT  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTAAAATATTTGTTTGACTTGGCTCCATCACAGGGGTCTCGAAACCTTTT  600

seq1  TTGGATTTCCATTCTAAGAGTTCTTCATTCTCTACCACCAGCCACTGTCC  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGGATTTCCATTCTAAGAGTTCTTCATTCTCTACCACCAGCCACTGTCC  650

seq1  TTTTCTTCAAGGAAGATTCTGGTCTTTGGGAAGAAGTCCTCCAGAGGCCT  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTTCTTCAAGGAAGATTCTGGTCTTTGGGAAGAAGTCCTCCAGAGGCCT  700

seq1  CCTTTGACTTTGACATTTAAAGTTGTCCTGTAAAGACTTTAGCTCATTTT  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTTTGACTTTGACATTTAAAGTTGTCCTGTAAAGACTTTAGCTCATTTT  750

seq1  GTACTGTTTGGTCACAGCCCTTCCAAGCCTCATTCTCATTTGGAAGCAGA  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTACTGTTTGGTCACAGCCCTTCCAAGCCTCATTCTCATTTGGAAGCAGA  800

seq1  ATCCTGCTTCCTGTCGCCTGCCCTCACGGTGCTGCCTGCAGTTCTGTTTT  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATCCTGCTTCCTGTCGCCTGCCCTCACGGTGCTGCCTGCAGTTCTGTTTT  850

seq1  TCTGATGTGTGCTGAAGAGAGTTTTCATCTCAGCTGGTTGAGTGGCATGT  900
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTGATGTGTGCTGAAGAGAGTTTTCATCTCAGCTGGTTGAGTGGCATGT  900

seq1  AGGATGATACATCTTGTGATGATGCGATCTTTCTTGCACTCTCAGCCATT  950
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGATGATACATCTTGTGATGATGCGATCTTTCTTGCACTCTCAGCCATT  950

seq1  AGCTTTCTTTGTTTTCAATGTTTAGAGTTCTCTTCTTGAGATCCTTTCCT  1000
      ||||||||||| ||||||||||||||| ||                 |||
seq2  AGCTTTCTTTG-TTTCAATGTTTAGAG-TCNNNNNNNNNNNNNNNNNCCT  998

seq1  AACATCTCTATTTTAAACTACAGAAATGATTTAGAGATTTGAAGCTTTTA  1050
      ||||||| |||||| |||||||| ||||||||||||| ||||||||||  
seq2  AACATCTTTATTTT-AACTACAG-AATGATTTAGAGA-TTGAAGCTTT--  1043

seq1  ATTAAAGACCTCAGA  1065
      |||||||||||||||
seq2  ATTAAAGACCTCAGA  1058


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