BAC Information

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BAC

Clone NameB6Ng01-024H14
Chromosome1 (Build37)
Map Location 26,871,543 - 26,980,297
singlet/doubletdoublet
Overlap genenone
Upstream geneBai3, 4931408C20Rik
Downstream geneLOC677427, LOC100040952, EG433281
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-024H14.bB6Ng01-024H14.g
ACCDH856099DH856100
length5771,031
definitionDH856099|Mus musculus domesticus DNA, BAC clone: B6Ng01-024H14, 5' end.DH856100|Mus musculus domesticus DNA, BAC clone: B6Ng01-024H14, 3' end.
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(26,979,718 - 26,980,297)(26,871,543 - 26,872,593)
sequence
caaattaattcctggtgacttttgtactagctaaggattttacctgaaac
catccgttttgagaaaagcaagaaaactacatccgaaaataattctgagt
ttgctatgcgatgcaatttgtaggtgtataattgaacaccctcctacctt
tttatcaatgaaaaacaaatgaagttcccgaattggccagagattcgaag
tctctgctggatactttgaataaccacacagtacatgccctcttaccttt
gtatagaagaagcacaccacacagccagtgcagaaatagcagcaaaacac
ttaaaaatcaaatgctagatttttttattcagcacaaaagggcttaattg
acgaaggtcaaaaatgaaattctggggaaaatcaattacccttatccagt
aaaaatgaaatactggttgaatgtggtagctgataatgttgcccgatatg
cttatacctgaagaagtggcttaatgaacaactgaatcgccttggaaaat
agaaaactgagattgcttttcttctctgaatacttgcgtttgtaagatgg
ccttcttccaaaattagagccacttcg
gaattctcggccagcctggtctacaaattgcgttccaggacagccagggc
tatacggagaaaccctgtctcaaaaaaaaaaataaataaataaaaaaaaa
taaaacaaaaccaaacaaacaaaacaacaaagcaaaacaaagcacaatct
cactctagctgggtgttgttctgtcatttattatttcaaaaacatgtaat
tttgtgggactggagctaggaagttaatactccttgatgttctttctgag
gtcttacattcaattactagtacctatatggtggcttacagctatctgta
cctttcttttctgagaagacagttacctctccgtgcctgcatgagcacta
tgattttcataaatttccatgcagccagaaactccatacaaatataatta
aaatacaaacttcataactctgccaggtgcaaataaaaaacagcataatt
aacagtttctaaaagaaatggacttgctattagtttttttttctcctctt
aataatgttgcagtttatatatttgcaaatatccaatatccagaaagtac
tgatatacttaatatgtggttcatttgtattgtttctgtctaatgaaaaa
aagttagcgtgctctacatagaaagtaggatgaggattttatacttttat
ttgactcaattcctctagaacagtgactctcagccttcctaatgctgtga
tcctagaatacagtgcctcatgctgtggtgacacctaaccataaaattct
tttgcttgctacttcttaactgtaattttgctactgctatgattgtatcc
aactatctgggcttatgtgatccttgtaaaaggatcattgacctccaaaa
gtttttgcaacttgcaggtgagaacaactgaaggctctttcttactttct
ttctcttacctgaaagtcggctgtttgttagagctcactgtgagagagcc
tcaagtgtcaaatacagctgcgttagtaatgtgcatctatgaatcagcac
atttggttcatgctgatgattcatgtcatgc
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr1_26979718_26980297
seq2: B6Ng01-024H14.b_27_603 (reverse)

seq1  CGAAGTGACTCTACTTTTGGAACAACTGCATCTAACAAACGCACGTATTC  50
      ||||||| ||||| |||||||| ||   ||||| ||||||||| ||||||
seq2  CGAAGTGGCTCTAATTTTGGAAGAAGGCCATCTTACAAACGCAAGTATTC  50

seq1  AGAGATGCAAAGTTAATCTCAGTTTTCTATTTTCCAATTTGAGTCAGTTG  100
      ||||| | ||||  |||||||||||||||||||||||   || |||||||
seq2  AGAGAAGAAAAG-CAATCTCAGTTTTCTATTTTCCAAGGCGATTCAGTTG  99

seq1  CTCTTTAAGCCACTTCTTCATGTATAAGCATATCTGGCAACATTATCAGC  150
       || |||||||||||||||| ||||||||||||| |||||||||||||||
seq2  TTCATTAAGCCACTTCTTCAGGTATAAGCATATCGGGCAACATTATCAGC  149

seq1  TACCACATTCAACTAGTATTTCATTTTTACTGGATAAGACTAATTGATTT  200
      ||||||||||||| ||||||||||||||||||||||||  ||||||||||
seq2  TACCACATTCAACCAGTATTTCATTTTTACTGGATAAGGGTAATTGATTT  199

seq1  TCCCCAGAATTTCATTTTTAACCTTTGTCAATTAAGCCCTTTTGTGCTGA  250
      ||||||||||||||||||| ||||| ||||||||||||||||||||||||
seq2  TCCCCAGAATTTCATTTTTGACCTTCGTCAATTAAGCCCTTTTGTGCTGA  249

seq1  ATAAAAAAATCTAGCATTTGAATTTTAAGTGTTTTGCTGCTATTTCTGCA  300
      ||||||||||||||||||||| ||||||||||||||||||||||||||||
seq2  ATAAAAAAATCTAGCATTTGATTTTTAAGTGTTTTGCTGCTATTTCTGCA  299

seq1  CTGGCTGTGTGGTGTGCTTCTTCTATACAAAGGTAAGAGGGCATGTACTG  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGGCTGTGTGGTGTGCTTCTTCTATACAAAGGTAAGAGGGCATGTACTG  349

seq1  TGTGGTTATTCAAAGTATCCAGCAGAGACTTTGAATCTCTGGCCATGTAG  400
      ||||||||||||||||||||||||||||||| |||||||||||||  | |
seq2  TGTGGTTATTCAAAGTATCCAGCAGAGACTTCGAATCTCTGGCCAATTCG  399

seq1  GGAACATCATTTGTTTTTCATTGATAAAAATGTAGGAGGGTGTTCAATTA  450
      ||||| |||||||||||||||||||||||| |||||||||||||||||||
seq2  GGAACTTCATTTGTTTTTCATTGATAAAAAGGTAGGAGGGTGTTCAATTA  449

seq1  TACACCTACAAATTTCATCACATAACAAAATCAGAATTATCTACGGATGT  500
      |||||||||||||| |||| |||| |||| |||||||||| | |||||||
seq2  TACACCTACAAATTGCATCGCATAGCAAACTCAGAATTATTTTCGGATGT  499

seq1  ACTTTTCTTGCTTTTCTCAAAACGGATGGCTTCAGGTAAAAATCCTTAGC  550
      | ||||||||||||||||||||||||||| ||||||| ||||||||||||
seq2  AGTTTTCTTGCTTTTCTCAAAACGGATGGTTTCAGGT-AAAATCCTTAGC  548

seq1  TTGGTACAAAAGTCACCTTGAATTAATTTG  580
       | ||||||||||||||  |||||||||||
seq2  -TAGTACAAAAGTCACCAGGAATTAATTTG  577

seq1: chr1_26871543_26872593
seq2: B6Ng01-024H14.g_70_1100

seq1  GAATTCAAGGCCAGCCTGGTCTACAAAGTGCGTTCCAGGACAGCCAGGGC  50
      ||||||  ||||||||||||||||||| ||||||||||||||||||||||
seq2  GAATTCTCGGCCAGCCTGGTCTACAAATTGCGTTCCAGGACAGCCAGGGC  50

seq1  TATACAGAGAAACCCTGTCTCAAAAAAAAAAATAAATAAATAAAAAAAAA  100
      ||||| ||||||||||||||||||||||||||||||||||||||||||||
seq2  TATACGGAGAAACCCTGTCTCAAAAAAAAAAATAAATAAATAAAAAAAAA  100

seq1  TAAAACAAAACCAAACAAACAAAACAACAAAGCAAAACAAAGCACAATCT  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAAAACAAAACCAAACAAACAAAACAACAAAGCAAAACAAAGCACAATCT  150

seq1  CACTCTAGCTGGGTGTTGTTCTGTCATTTATTATTTCAAAAACATGTAAT  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CACTCTAGCTGGGTGTTGTTCTGTCATTTATTATTTCAAAAACATGTAAT  200

seq1  TTTGTGGGACTGGAGCTAGGAAGTTAAGACTCCTTGATGTTCTTTCTGAG  250
      ||||||||||||||||||||||||||| ||||||||||||||||||||||
seq2  TTTGTGGGACTGGAGCTAGGAAGTTAATACTCCTTGATGTTCTTTCTGAG  250

seq1  GTCTTACATTCAATTACTAGTACCTATATGGTGGCTTACAGCTATCTGTA  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTCTTACATTCAATTACTAGTACCTATATGGTGGCTTACAGCTATCTGTA  300

seq1  CCTTTCTTTTCTGAGAAGACAGTTACCTCTCCGTGCCTGCATGAGCACTA  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTTTCTTTTCTGAGAAGACAGTTACCTCTCCGTGCCTGCATGAGCACTA  350

seq1  TGATTTTCATAAATTTCCATGCAGCCAGAAACTCCATACAAATATAATTA  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGATTTTCATAAATTTCCATGCAGCCAGAAACTCCATACAAATATAATTA  400

seq1  AAATACAAACTTCATAACTCTGCCAGGTGCAAATAAAAAACAGCATAATT  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAATACAAACTTCATAACTCTGCCAGGTGCAAATAAAAAACAGCATAATT  450

seq1  AACAGTTTCTAAAAGAAATGGACTTGTTATTAGTTTTTTTTTCTCCTCTT  500
      |||||||||||||||||||||||||| |||||||||||||||||||||||
seq2  AACAGTTTCTAAAAGAAATGGACTTGCTATTAGTTTTTTTTTCTCCTCTT  500

seq1  AATAATGTTGCAGTTTATATATTTGCAAATATCCAATATCCAGAAAGTAC  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATAATGTTGCAGTTTATATATTTGCAAATATCCAATATCCAGAAAGTAC  550

seq1  TGATATACTTAATATGTGGTTCATTTGTATTGTTTCTGTCTAATGAAAAA  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGATATACTTAATATGTGGTTCATTTGTATTGTTTCTGTCTAATGAAAAA  600

seq1  ATGTTAGCATGCTCTACATAGAAAGTAGGATGAGGATTTTATACTTTTAT  650
      | |||||| |||||||||||||||||||||||||||||||||||||||||
seq2  AAGTTAGCGTGCTCTACATAGAAAGTAGGATGAGGATTTTATACTTTTAT  650

seq1  TTGACTCAATTCCTCTAGAACAGTGACTCTCAGCCTTCCTAATGCTGTGA  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGACTCAATTCCTCTAGAACAGTGACTCTCAGCCTTCCTAATGCTGTGA  700

seq1  TCCTAGAATACAGTGCCTCATGCTGTGGTGACACCTAACCATAAAATTCT  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCCTAGAATACAGTGCCTCATGCTGTGGTGACACCTAACCATAAAATTCT  750

seq1  TTTGCTTGCTACTTCTTAACTGTAATTTTGCTACTGCTATGATTGTAATC  800
      |||||||||||||||||||||||||||||||||||||||||||||| |||
seq2  TTTGCTTGCTACTTCTTAACTGTAATTTTGCTACTGCTATGATTGT-ATC  799

seq1  CAACTATCTGGGCTTAGGTGATCCTTGTAAAAGGATTCATTGACCTCCAA  850
      |||||||||||||||| |||||||||||||||||| ||||||||||||||
seq2  CAACTATCTGGGCTTATGTGATCCTTGTAAAAGGA-TCATTGACCTCCAA  848

seq1  AAGTTTTTGCAACTTGCAGGTTGAGAACAACTGAAGGCTCTTTCTTTACT  900
      |||||||||||||||||||| ||||||||||||||||||||||| |||||
seq2  AAGTTTTTGCAACTTGCAGG-TGAGAACAACTGAAGGCTCTTTC-TTACT  896

seq1  TTCTTTTCTCTTTACACTGAAAGTCGGCTTGTTTTGTTTGGGGCTCACTG  950
      ||| |||||| |||| |||||||||||| |||||   || | ||||||||
seq2  TTC-TTTCTC-TTAC-CTGAAAGTCGGC-TGTTT--GTTAGAGCTCACTG  940

seq1  TGAGGTGATGCTTCAAGTGTTAAATAACAGGCTGGCGTTAGTAATGTGGC  1000
      ||| | || || |||||||| |||| ||| ||| ||||||||||||||  
seq2  TGA-GAGA-GCCTCAAGTGTCAAAT-ACA-GCT-GCGTTAGTAATGTG--  983

seq1  AATCTATGAATCAGCACATCTGTGTTCATGCTGATGAGTTCATGTTCATG  1050
       |||||||||||||||||| || |||||||||||||| |||||| |||||
seq2  CATCTATGAATCAGCACATTTG-GTTCATGCTGATGA-TTCATG-TCATG  1030

seq1  C  1051
      |
seq2  C  1031