BAC Information

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BAC

Clone NameB6Ng01-024M18
Chromosome1 (Build37)
Map Location 120,079,821 - 120,080,428
singlet/doubletsinglet
Overlap genenone
Upstream geneB020011L13Rik, LOC100041684, LOC636972, EG666785, EG634762, LOC100042368
Downstream geneLOC637083, Tsn, Mki67ip, Clasp1, Tcfcp2l1, LOC100041753, Gli2, LOC666838
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-024M18.bB6Ng01-024M18.g
ACCDH856323DH856324
length1,053950
definitionDH856323|Mus musculus domesticus DNA, BAC clone: B6Ng01-024M18, 5' end.DH856324|Mus musculus domesticus DNA, BAC clone: B6Ng01-024M18, 3' end.
singlet/doublet---singlet
BLAST hitno hit dataunique
sequence
gaattcctgatctttccaacacttttatcatgaatgggtgttggatcttg
tcaaatgctttttctgcatctaacgagatgatcatgtggtttttgtcttt
gagtttgtttatataatggattacattgatggattttcgtatattaaacc
atccctgcatccctggaatataacttacttggtcaggatggattattgct
taaatgtgttcttggattcggttagcgagaattgtattgaggatttttgc
atcgatattcataggagaaattggtctgaagttctctatctttgttgggt
ctttctgtggtttaggtatcagagtaatagtggcttcataaaatgagttg
ggtagagtaccttctacttctattttgtgaaatagtttgtgcagaactgg
aattagatcttctttgaaggtctgatagaactctgcactaaactcgtctg
gtcctgggctttttttggctgggagactattgataactgcttctatttct
ttaggtgatatgggactgtttagatggtcaacttgatcctgattcaactt
tggtacctggtatctgtccagaaatttgtccatttcatccaggttttcca
gttttgttgagtatagccttttgtagaaggatctgatggtgttttggatt
tcttcaggatctgttgttatgtctcccttttcattttctgattttgttaa
ttaggatttttgtccctgtaccctttagtgaatctagctaagggtttatc
tatcttgttgattttttcaaagaaccaactcctcgtttggttaattcttt
gaatagttcttcttgtttccacttgggttgattcacccctgagttgatta
ttacctgctctctactcctcttgggtgaatttgcttccttttgttctaga
gcttttagatgtgtttcaagctgctagtgggtgctctctccagttctttt
tggatgcactcgaagctatgagttacccccttaaatgctttcatttgtgt
cccataggtttggaatcgtttgggcttattcataaacctaaaagctttaa
ttt
gaattctataataatttagtgtttaatattagatgtgggatccttattta
tggaaagtattaaatgttcattagtgatatttttcaggtataaatggata
tgaatataaaagctgaacaaatttttatgtattaattgattcttaaaata
tacaatattattaatatgtttgatgtataaaatgcactgcaatagtaaaa
gattaacaaatgtaaatttgtattcatagaaagcaagtatccatcatcaa
atcaaatagaaacttaatgaaattttctaaaatcagcagcaaggtaaagc
tgaccactctcttcttagcttttcaatatagtgcttgaacttatagttag
aacagtaaggtatataaaggaaatcaaggagatataatttggaaatcaag
aacttaaaatattgctattggaagattatatgatagtatatgcaaatgat
aacatgcctctatcagagaacttctagagctaaaaatgtgttcagtaaaa
tggctgcttaaaaaattacctcaaaaatatcagtagccaacttttattca
aagataaatgggctgagaagaaataaggaaaacaacttctgtcacaatag
tcagaagtaaagaaaatatgttattgcaactctaatcaagcaaggcaaaa
acctgatatgacatgaacttcaagtttctgaaaaaagattgaagaagtta
ttagaagatggtcagatcttacatgtttcatggataggtgtgattaaaat
agcaaaaaagatcattttaccaaaaccaatctacagattcattgcaatgc
ccatcaaaattctgacacaattcttgaagaaaattctaaacttcctaagt
aacaaaatccccgaattgcaaactattcctgacagttaagatcttatggt
gaataccatcctgaattcaagctgtactacagagcattgtagtaaatctg

quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr1_120079821_120080428
seq2: B6Ng01-024M18.g_69_676 (reverse)

seq1  ACTTCTGACTATTGTGACAGAAGTTGTTTTCCTTATTTCTTCTCAGCCCA  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTTCTGACTATTGTGACAGAAGTTGTTTTCCTTATTTCTTCTCAGCCCA  50

seq1  TTTATCTTTGAATAAAAGTTGGCTACTGATATTTTTGAGGTAATTTTTTA  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTATCTTTGAATAAAAGTTGGCTACTGATATTTTTGAGGTAATTTTTTA  100

seq1  AGCAGCCATTTTACTGAACACATTTTTAGCTCTAGAAGTTCTCTGATAGA  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGCAGCCATTTTACTGAACACATTTTTAGCTCTAGAAGTTCTCTGATAGA  150

seq1  GGCATGTTATCATTTGCATATACTATCATATAATCTTCCAATAGCAATAT  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGCATGTTATCATTTGCATATACTATCATATAATCTTCCAATAGCAATAT  200

seq1  TTTAAGTTCTTGATTTCCAAATTATATCTCCTTGATTTCCTTTATATACC  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTAAGTTCTTGATTTCCAAATTATATCTCCTTGATTTCCTTTATATACC  250

seq1  TTACTGTTCTAACTATAAGTTCAAGCACTATATTGAAAAGCTAAGAAGAG  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTACTGTTCTAACTATAAGTTCAAGCACTATATTGAAAAGCTAAGAAGAG  300

seq1  AGTGGTCAGCTTTACCTTGCTGCTGATTTTAGAAAATTTCATTAAGTTTC  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTGGTCAGCTTTACCTTGCTGCTGATTTTAGAAAATTTCATTAAGTTTC  350

seq1  TATTTGATTTGATGATGGATACTTGCTTTCTATGAATACAAATTTACATT  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATTTGATTTGATGATGGATACTTGCTTTCTATGAATACAAATTTACATT  400

seq1  TGTTAATCTTTTACTATTGCAGTGCATTTTATACATCAAACATATTAATA  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTTAATCTTTTACTATTGCAGTGCATTTTATACATCAAACATATTAATA  450

seq1  ATATTGTATATTTTAAGAATCAATTAATACATAAAAATTTGTTCAGCTTT  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATATTGTATATTTTAAGAATCAATTAATACATAAAAATTTGTTCAGCTTT  500

seq1  TATATTCATATCCATTTATACCTGAAAAATATCACTAATGAACATTTAAT  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATATTCATATCCATTTATACCTGAAAAATATCACTAATGAACATTTAAT  550

seq1  ACTTTCCATAAATAAGGATCCCACATCTAATATTAAACACTAAATTATTA  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTTTCCATAAATAAGGATCCCACATCTAATATTAAACACTAAATTATTA  600

seq1  TAGAATTC  608
      ||||||||
seq2  TAGAATTC  608