BAC Information

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BAC

Clone NameB6Ng01-025C12
Chromosome1 (Build37)
Map Location 88,556,940 - 88,665,506
singlet/doubletdoublet
Overlap geneNppc, 4930429A22Rik
Upstream geneSp100, A630001G21Rik, Cab39, Itm2c, 4933407L21Rik, Gpr55, Spata3, 2810459M11Rik, Psmd1, Htr2b, Armc9, B3gnt7, EG383538, Ncl, Snord82, Nmur1, 1700019O17Rik, LOC100040414, Ptma, Pde6d, Cops7b
Downstream geneEG620213, LOC208256, Akp5, Alpi, Akp3, Ecel1, 1700027L20Rik, Chrnd, Chrng, Eif4e2, Efhd1, Tnrc15, LOC100040600, LOC100040591, 3110079O15Rik, Ngef, LOC620454, Neu2, Inpp5d, Atg16l1
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-025C12.bB6Ng01-025C12.g
ACCDH856587DH856588
length446639
definitionDH856587|Mus musculus domesticus DNA, BAC clone: B6Ng01-025C12, 5' end.DH856588|Mus musculus domesticus DNA, BAC clone: B6Ng01-025C12, 3' end.
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(88,657,135 - 88,665,506)(88,556,940 - 88,557,578)
sequence
agattccccccaaaaaaataatactaaagtaaataagacttaaaaagttg
atctcagtaacacaagcatctgtagctccatggaaactctacagaaaaat
ggcagtcaggagtcagaatcaagaaacttccataaactcactcaccagcc
aaccagctcacaaagtggtgaagagaccctgactcaaacaaggcaagagc
caaaacctgagcttgtctattgacctccacatgtactccatcacagacac
agacacacacacatacacacgcacactgcatcacacatgcacaaaagatg
aagggtaatagttatgaaggataaatattttaaattgagaaaaggatgag
aagaaacaagaaccaaagaaaaaaatgaaaagccagcaaacaaatgtgtg
tgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtggggggggggg
gaattctcatgctgtgtaaataggcattaatcttcttttcaggtatctat
gtaccttcttcacacagccacagaaaacacagaggtgagaggtaggaagt
ctgcccctactccataagcttaacaacgtgaaggaaaccaaagtcacaac
caggtagggtaaggtagtgatgctgccacaggccaaaaatgtgggcctta
ttcagaaataagccgtcaaccaagcacataagtcaaagcatggagaccgt
gctgggtgtgatggttggtgtggattgtgacaagcacagctgtaagggct
tgtctaggttagtatggcctttgagcgagcctccatcatctgaactgaac
tggttggggtgggaagacccatcctaattgctgaacaaatagaaggggtc
tgcccatcattcaccactctctgcctgtcgttggatcggtgtgaccagct
gcttcaggctcctgccgtgatgggctgtccccgaaaacagcgagccagaa
caaatgctttcttagattgcttctgttagttatgttatcgaagtctctgt
tactgatttatggacccagtgactcagtgagaaattccactccctgaagg
aagaggaggagaaggggagagaggaggaagagaaggatg
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr1_88657135_88665506
seq2: B6Ng01-025C12.b_45_496 (reverse)

seq1  CCCCCCCCCCCACACACACACACACTTTAGTCAATCTACCTTGTCAGATC  50
                                                        
seq2  --------------------------------------------------  0

seq1  CTTGCACTAATTTCTGATACTTTTTTGGATAAGAAAAGTGCTTGTAGGGT  100
                                                        
seq2  --------------------------------------------------  0

seq1  CTTGTCAAGTGTGAAATAATTTATAATTTCCTATACCCTATGCTGTGAGA  150
                                                        
seq2  --------------------------------------------------  0

seq1  GTTAGAACAACAAATCCACAGAAATGGTGGTATTTTTCATCCATTTCTGC  200
                                                        
seq2  --------------------------------------------------  0

seq1  TTCCTGTATTGAGACACACAGCAATATATATTTAGTGCTGAGATGTAAGG  250
                                                        
seq2  --------------------------------------------------  0

seq1  CGTGTGCCACCGAGCCTGGACCTAGAGGTCTGATTTTGTGAATGCCCATG  300
                                                        
seq2  --------------------------------------------------  0

seq1  CTGCTAGAGCTAGCTAAGCAGGAAAGGGTTTGGCAAAACAGGTAGCATCC  350
                                                        
seq2  --------------------------------------------------  0

seq1  CTGCAGTTGGCACAGTCCAGGCTTTGAGGACAAATCTTACTGTTTTTCTT  400
                                                        
seq2  --------------------------------------------------  0

seq1  TTACAGTTAGTATGTAAAAATGGAAGAATTCAAGCTAGAAACTATCCTGA  450
                                                        
seq2  --------------------------------------------------  0

seq1  CTTTTGTTGGAAAATTGACTGCAGTGAGGCAAGTTGCATGTTACAGGGAG  500
                                                        
seq2  --------------------------------------------------  0

seq1  CCAGTGTGAAAGCTGAGACTTGGAGGTGAGAGTTGAGGTGGAGAGAAGTT  550
                                                        
seq2  --------------------------------------------------  0

seq1  AGCATGTGAAGATAGAGTAGACAGGAGTGAAGGCAGCTGTAAGAACAGAC  600
                                                        
seq2  --------------------------------------------------  0

seq1  AGGGGAGCTGCAAACAGCTGTTACACCTTGTATTTAAGCAAAATGACCGT  650
                                                        
seq2  --------------------------------------------------  0

seq1  GATTTCTTTAGCTGAAATGGAGGACAGTGAGGGAAAGTATGTATTACTGT  700
                                                        
seq2  --------------------------------------------------  0

seq1  AAACATCACTGAACTGGTAAAAGTCAGAGAAAAGAGGGTAGAGAACTCTG  750
                                                        
seq2  --------------------------------------------------  0

seq1  AAGAGCTTGAGAGAGGTAGAGAGACATTGAGGAACTCAAGGTTATAATAG  800
                                                        
seq2  --------------------------------------------------  0

seq1  AGCTGAAATAGGCAGAGGTAATATTTGAAAAAGAATGATGGAAACCTCTC  850
                                                        
seq2  --------------------------------------------------  0

seq1  AAACTGATGAAAGTTATCAAGCATCAGAATCAAGAAATTGTATTGACCCC  900
                                                        
seq2  --------------------------------------------------  0

seq1  CAAGTAGGATGAAAAGAAAGTCATCCTTTGAATATGGTGGTAAGTCTGCA  950
                                                        
seq2  --------------------------------------------------  0

seq1  GAAACCAAAGAGAAAACATTTCCAAAGTGCCAGGGACAGGAACAGTATGC  1000
                                                        
seq2  --------------------------------------------------  0

seq1  TTTCAAAAATTAAGAGAGTAACAGCTGACTTGTTGATAGCCACAGAGATT  1050
                                                        
seq2  --------------------------------------------------  0

seq1  ATAAGACAAGGGGATGATATCTTCGGCTCTGAATCTAGTTGATAGTCTAG  1100
                                                        
seq2  --------------------------------------------------  0

seq1  AACTCTAAATCTGCCAAAACCTGCCAAAAATCTATGAGAGCAAAGACTAC  1150
                                                        
seq2  --------------------------------------------------  0

seq1  ATACAGATATGTCACACTTGTTCAAAAGACATGACTAGTGGCTGTCACAC  1200
                                                        
seq2  --------------------------------------------------  0

seq1  TGGACCTCACAGACATGCAAGTGTCTGTCACTGCAGAAAACCATGTCTTC  1250
                                                        
seq2  --------------------------------------------------  0

seq1  TTAAAGAAGGTGACTGAGAATGTAGCTCAGTGGTACTGTATGACATGTGC  1300
                                                        
seq2  --------------------------------------------------  0

seq1  AAACCCTGAGCTTCAGTCTTCAGCACAGTGGAAACCAGATAGCACAGGAG  1350
                                                        
seq2  --------------------------------------------------  0

seq1  CATCAGTCACATTCTGCCCTCATGTTTTTCATGCCTACTAGCTTTTTCTT  1400
                                                        
seq2  --------------------------------------------------  0

seq1  GGTCTTGTTAATATTTTCCTTTTTGGATATATTATTGAAAAAAACTTCAG  1450
                                                        
seq2  --------------------------------------------------  0

seq1  CATCCTCGATTGTCCCACTTACTGGCAAGCCCTGCTAAACATTTTTTTCC  1500
                                                        
seq2  --------------------------------------------------  0

seq1  CCTGCTAAACATTTAAAAAAGAAATAGTCCTTGTCTTACACAAGGAGCTA  1550
                                                        
seq2  --------------------------------------------------  0

seq1  CCTGCCACATCCACCCCGACCAGCAGGAAAGATGCAACACCTGGTTGTCT  1600
                                                        
seq2  --------------------------------------------------  0

seq1  TTCTTCAAGCAGGTTTATTCAGGAACATTTAGCATTGCAATGCAGGAACA  1650
                                                        
seq2  --------------------------------------------------  0

seq1  GGAATCCCCAGAACCACCCTGGGGCGCCCCTTAAATACCCTACTGACTCC  1700
                                                        
seq2  --------------------------------------------------  0

seq1  TCCCAATCACCCCAGTCACAAAATGGCAGTCCATAGGTTCACAGCAAGTG  1750
                                                        
seq2  --------------------------------------------------  0

seq1  ACGACACCTCAGGTGAGCTGATGAGGCAGAAATAATGAGGAAGTCAGGCG  1800
                                                        
seq2  --------------------------------------------------  0

seq1  CATGTCATAAGACCTGGCAGCCATCCCGGGCACCATCTTGGGGTGGCGGC  1850
                                                        
seq2  --------------------------------------------------  0

seq1  TGCATCTGCTCCTCACAGCTACCCTGTTTCCTTCATTCTATAAGACCACC  1900
                                                        
seq2  --------------------------------------------------  0

seq1  ATTGTAAAATATTAGAGTAAGAAACAACATAAAAGATCTAAAGATGAATA  1950
                                                        
seq2  --------------------------------------------------  0

seq1  CCTCTCATAAACACAGGTGAACAAGTATCCAACAGGATATTCGCAAAGAG  2000
                                                        
seq2  --------------------------------------------------  0

seq1  ACTCTAGGAACATGGCCCAAGAATAGAACATGAATACATGGTGCTTGTCC  2050
                                                        
seq2  --------------------------------------------------  0

seq1  TAGAAATGCAAAGTTGGCTTAATGTTGAAAAGCAGTCTTTATAGCCCACC  2100
                                                        
seq2  --------------------------------------------------  0

seq1  CTTTAACAAACTAAGTCTTATACCTTATTTCAACCAAGTATCAGCCAGTA  2150
                                                        
seq2  --------------------------------------------------  0

seq1  TACATAGAAAATGCAATTGACAAAATTCCATAACTGTTCCTGATAAAAAT  2200
                                                        
seq2  --------------------------------------------------  0

seq1  TCTAGTACTGAAGAGCCTAGGGCAGGAGGACCCTGAGTTTGGGCTACACG  2250
                                                        
seq2  --------------------------------------------------  0

seq1  GTAAGACTGTCCTACCCACTAAGAGGAGGATGACAAGGCCATTCCTGCTT  2300
                                                        
seq2  --------------------------------------------------  0

seq1  CTTCTCAGTTTTTGAAGGCAGATCCCTCCACCGCTAAGAATGACACTGCT  2350
                                                        
seq2  --------------------------------------------------  0

seq1  CTAATGTCTTCTACCCATTCTATGTTTTCTCAGTTTATGATATGATCACT  2400
                                                        
seq2  --------------------------------------------------  0

seq1  ATTCTTGGTTTGCTGCAAATTTTTATCACGAACAGTTATGGGATGTAGGT  2450
                                                        
seq2  --------------------------------------------------  0

seq1  GTCTGCTACCAAGCCTGCCTTCCCTGTATTGTTTCAGAAATTCAAGCCAG  2500
                                                        
seq2  --------------------------------------------------  0

seq1  TACCAAAAGGAAGTAGAAAATAACTGTTTTATGATTATGTATATATACAT  2550
                                                        
seq2  --------------------------------------------------  0

seq1  AAATATGCAATACACACATATATGTGTGTGAATATATATACATATATACA  2600
                                                        
seq2  --------------------------------------------------  0

seq1  TATGTGTGTGTGTATGTGTGTGTGTGTGTATATGCCTTTTGTTTTTACTC  2650
                                                        
seq2  --------------------------------------------------  0

seq1  TTCTTTTATAATACATCCTAACTGCTGCCTCCCTTCCCTTTCCTCCTCCA  2700
                                                        
seq2  --------------------------------------------------  0

seq1  GCCACTGCCTGGATGTCCAGGTTCTAGAAACTAGATGGCTTAGAGACCTA  2750
                                                        
seq2  --------------------------------------------------  0

seq1  GGGTAGAACCAAACACTACTTACAAAGATTGTTTTATTATTACAGAGAAA  2800
                                                        
seq2  --------------------------------------------------  0

seq1  ACTACATGGTTTTCTCTGTAGAAAGTTCTAACGAGTCTGTTGAAAAAGAT  2850
                                                        
seq2  --------------------------------------------------  0

seq1  GCTAGAAGAAGTGAGTTATCAAGATTGAAGAACTGAAGGTTTATATAAAA  2900
                                                        
seq2  --------------------------------------------------  0

seq1  AAATCATTTGTAATTCTACATGCTGGCAATGAAAAATAGGAAATTAAAAA  2950
                                                        
seq2  --------------------------------------------------  0

seq1  TTTCTGAAAATGCTATTTATAATAGGATTTTTATGACACAATTAAGGAGA  3000
                                                        
seq2  --------------------------------------------------  0

seq1  AACTTGAGCAAAAATATAAGTTGTGTAACCTAAAACTATAAAATCATCAG  3050
                                                        
seq2  --------------------------------------------------  0

seq1  TGAGAGAAATTAAGAATGCAGGGAATGAGGAGAAATAGAAAAGAGTCAAT  3100
                                                        
seq2  --------------------------------------------------  0

seq1  ATTTTTAAGTTTTCACTTCTACCCAAACAGATCAAACTGACTCCATGTGC  3150
                                                        
seq2  --------------------------------------------------  0

seq1  TGCCTTCCTTCAATATAGCAGTCTCTTTAAAGGATTTACAGACAGCTTTT  3200
                                                        
seq2  --------------------------------------------------  0

seq1  CAGGTTTATGTGGACGAGCCAAACAAAGAGCAGAATTGGAGCTTTCAAGA  3250
                                                        
seq2  --------------------------------------------------  0

seq1  CCTTCGTTAAAGCTCCTGTAGCAGGGCTAGCTATGCTGTTGGATTTAGGT  3300
                                                        
seq2  --------------------------------------------------  0

seq1  GGATATGAAGGTAAGATAGGGACCAGCAAGAGAAGGAAACAGAAGTTAGA  3350
                                                        
seq2  --------------------------------------------------  0

seq1  AATGAATCAGATCCAAATGTTTATGTAAAAATACCAATTTGCTAGTAGAA  3400
                                                        
seq2  --------------------------------------------------  0

seq1  AATTAAGTCAGAAATTTTAGATTTCCAGATTTTAGACATCAGATTTGGCC  3450
                                                        
seq2  --------------------------------------------------  0

seq1  AATATTTCCTAAGTATAACAAAAGAAATTACAAAGTATAAAAAAAGTCAA  3500
                                                        
seq2  --------------------------------------------------  0

seq1  TAAATTTGATTACATCAAAAATCATATACTTTGTTCTTCTAGAGCCACTG  3550
                                                        
seq2  --------------------------------------------------  0

seq1  TTTGAAATAAAACAAGATAAGTCACAGATATGGGTAAAGATTGCAAAAAA  3600
                                                        
seq2  --------------------------------------------------  0

seq1  CATTTTCTGACTATGAACTTTTATTTAGAATATAAAGAAATATTAATTCA  3650
                                                        
seq2  --------------------------------------------------  0

seq1  ATAATAACTAAATTACAAAATTCATAAAATGTTTAACAGCTTTACTAAAG  3700
                                                        
seq2  --------------------------------------------------  0

seq1  ATATATGATGGTAAATATGGGAAAAGATATTAAACATGATTAGTCTTTAA  3750
                                                        
seq2  --------------------------------------------------  0

seq1  GGAAATACAAAGTAAAATCACAAGATACTACAGACCTACTGGAATAGTTA  3800
                                                        
seq2  --------------------------------------------------  0

seq1  AAGTCAGCAAGATTGACCATGTGTTGGTTAGGTTATGGAGTAACTAGTAT  3850
                                                        
seq2  --------------------------------------------------  0

seq1  TGTTGATGGGAAAAAATGGACAATTCCTTTGGAAAGGAGTTTGGTAGTTT  3900
                                                        
seq2  --------------------------------------------------  0

seq1  CTTAAAATCTTCAGCATATGACTAATACATGATTCAGCCATTCTGGTTGT  3950
                                                        
seq2  --------------------------------------------------  0

seq1  TTACCTTAGTGAAATGAAATTATTGGCACATTAATTCTTTTTTTTGACAG  4000
                                                        
seq2  --------------------------------------------------  0

seq1  GTAGGGAACATATTTTATTACAGTTACAATTCTTAGATGTATCATGTGGC  4050
                                                        
seq2  --------------------------------------------------  0

seq1  AATGTTATTACTACAGCCAAGCCTAAGCAGGTGTTCATCCACATTTGACC  4100
                                                        
seq2  --------------------------------------------------  0

seq1  ACCAACCCTCTGCAACAGGTAGAAGATAGTACAGCGTTTCATAAAGGTTG  4150
                                                        
seq2  --------------------------------------------------  0

seq1  AACTTCAAAAATTATACCAAGCCCAACACAGTGGTATTTGTATAAAACAG  4200
                                                        
seq2  --------------------------------------------------  0

seq1  GCCCAGGACTTTGAACCTTCATCAGACTGGCAACTCCACAGGCTCATAGT  4250
                                                        
seq2  --------------------------------------------------  0

seq1  TGTGAGTTCCTGAATGGAGGGAGAAAGCAAATGCAGGCTGTTGAACTTGG  4300
                                                        
seq2  --------------------------------------------------  0

seq1  CCTCCAGGGATTCTTATGCATAAATTGCATGCTGCATGACTGAAAGCGAA  4350
                                                        
seq2  --------------------------------------------------  0

seq1  CTGCATTGCCATGTGTGAAGGGACATGTAGCCTGTCAGTCGCACTTGGGT  4400
                                                        
seq2  --------------------------------------------------  0

seq1  GAGTCTTTCTCACATAAAATAGAGGGGAAGAAGAAGTATCTCCAGTGGTA  4450
                                                        
seq2  --------------------------------------------------  0

seq1  CTCGGTTGCTGCCAGGCAGTAAGCGAGCTCCTCGTCACACCTGCACACAT  4500
                                                        
seq2  --------------------------------------------------  0

seq1  TTGTTCTCTGCTGGTCCAAACAGGATGCCATGGTCCATGTACTTCCATGG  4550
                                                        
seq2  --------------------------------------------------  0

seq1  ATAGCAGTCTAACTTAGGGCTGCAGCCGGCATCCTGAGCCTGAGAGTAGC  4600
                                                        
seq2  --------------------------------------------------  0

seq1  AGCAGTCATGGTGGTGGCAGCACCTGAAGGTGAGAGTGGGCAGACTATAG  4650
                                                        
seq2  --------------------------------------------------  0

seq1  CAGTCAATGGTGTTCGTCATGTGGCTCTCCATGGCCACCAAGGCCACAAT  4700
                                                        
seq2  --------------------------------------------------  0

seq1  AACAGCCATAGTTTACGTAAGCCATCGGAGATCGAGGACCAACACAATCC  4750
                                                        
seq2  --------------------------------------------------  0

seq1  AAGGTCCCTGCCAGTTCCAGGAGTCCATGCTTGTATACATGTGACCTCCT  4800
                                                        
seq2  --------------------------------------------------  0

seq1  GGTTGCTCTGTGCTCTGCTTTCCTCGTTTGCTTAGTGCAGGATAAGGTGG  4850
                                                        
seq2  --------------------------------------------------  0

seq1  CATCACGTCACAGAATAAAGTGCCTCAGACCCCACAAGCAAGAGAAGTGA  4900
                                                        
seq2  --------------------------------------------------  0

seq1  TAGCCAGTTCACAGAACTCAGGATCAGGGGCTAGGAGATTCAGACTGCTG  4950
                                                        
seq2  --------------------------------------------------  0

seq1  GAGAGGACTGCAGTTAACTATGGGGTTCATGAAGGGAGGACTCTGATGCC  5000
                                                        
seq2  --------------------------------------------------  0

seq1  AACCCCTCTCCCCGTTCATTTCTGAGTGAAATGCATGAGTGGAAGTCCCT  5050
                                                        
seq2  --------------------------------------------------  0

seq1  TAACATTTTACAACTGTGAGGCAGTCACAATTAACACTCTACAATCTCCT  5100
                                                        
seq2  --------------------------------------------------  0

seq1  CACTACCACCAAGAGAGAAACTGAGGTAGTCAAGGGTTGCCCCAAGTTAG  5150
                                                        
seq2  --------------------------------------------------  0

seq1  GTGGGAGTAAGAGAAGCATATATATATGTCTATTCATTTTTGTGGAATTG  5200
                                                        
seq2  --------------------------------------------------  0

seq1  TTAATTGCTTGTATATTTCAGAACTCATCACTTTGTACTTTTAGTATATG  5250
                                                        
seq2  --------------------------------------------------  0

seq1  TAGTTTATTATGTGTTAGTTTTACCTCAATAATGTTGTAGAAAGTACTGA  5300
                                                        
seq2  --------------------------------------------------  0

seq1  AAATAAACAAAGTTCTTTGCAAAAATGAGTTTGGAGTTCCAGGAAGAGAT  5350
                                                        
seq2  --------------------------------------------------  0

seq1  AGAAAATTCTAATTCAGTAAGGCCTAGGTGATGCCCCAAATTGTGCATTT  5400
                                                        
seq2  --------------------------------------------------  0

seq1  CTAGTAAGTTCCCAAGCCAAGTTGATTTTCTTATTTTGGGAGTCACACCT  5450
                                                        
seq2  --------------------------------------------------  0

seq1  TGAGTAAAAGATGTACTCTGTGGAGCAGAAAGGAAAGTAAAAGAAGCAGA  5500
                                                        
seq2  --------------------------------------------------  0

seq1  GAGGTGTTATGGTCCTTGGATCGGAGCTTTTTGGTGGGGGAAGATAGTTA  5550
                                                        
seq2  --------------------------------------------------  0

seq1  AGTGAGTAGTGTGTCCATTAACAGTTGTGGCTGGGCCGTTGAGTTCCAGG  5600
                                                        
seq2  --------------------------------------------------  0

seq1  CTAGATCTTTGTACCCTCTGTCTATGAAAAGAGATTGGCATGGGCAATCA  5650
                                                        
seq2  --------------------------------------------------  0

seq1  TAGGCTTGACTGGCAAGGCGCTTCCCCTTCTCGTAATTGCTGCCAAGGGC  5700
                                                        
seq2  --------------------------------------------------  0

seq1  TGGTGTAGGGCTGCAGGGGCTACACTCTTGAGTGGCAGTTTTGATATGCT  5750
                                                        
seq2  --------------------------------------------------  0

seq1  TCTTTAACTTTAAGAAGTTTGAGATTTGGATGCCATTCTGGTTTCTTATT  5800
                                                        
seq2  --------------------------------------------------  0

seq1  CTGTGTCTGTGGAGTTCCCAAGTGTCTTCACAGGGCCTGCTGACACTGGC  5850
                                                        
seq2  --------------------------------------------------  0

seq1  TTTGGTTCTTTTCAGATCAGTTCCATTAGGCACATCCCTTAGGCCTCATT  5900
                                                        
seq2  --------------------------------------------------  0

seq1  AGTCCATGTATTTTTCAGCTTCTCAGTTTGAAGGGCTTGGAGGTCTGTTT  5950
                                                        
seq2  --------------------------------------------------  0

seq1  GCTGTGACCTAGCTGTGACAGTTGTTGGTGACAGAATCAAACTAGACAGA  6000
                                                        
seq2  --------------------------------------------------  0

seq1  GGAGAATATTCAGACTGTCACTAGAAATTCCTGACATGTATAGTAAAGCC  6050
                                                        
seq2  --------------------------------------------------  0

seq1  AACTCAAAACATGGTGGCCAGTTGTATTACAGGTTTGTTAGTATAAAAAC  6100
                                                        
seq2  --------------------------------------------------  0

seq1  ATGTTGTTATTACAAGGGATCTCTAGTTAGGAGTATAAGTAAATGTGAAG  6150
                                                        
seq2  --------------------------------------------------  0

seq1  TAATTGGCTTATTTGTCTTTGCTTCTTTATGCTTGCTGTGTTCACTCTCT  6200
                                                        
seq2  --------------------------------------------------  0

seq1  TGGGTATGTAAACTACAGTGCCTTTAGGGTTTTAGAGGAAAACAACAGTT  6250
                                                        
seq2  --------------------------------------------------  0

seq1  CTTTTAGTTATAGTAGTAAATAGTCAATTTATTTCACAGCATGCTTTTTG  6300
                                                        
seq2  --------------------------------------------------  0

seq1  GCAAAATAGATAGCTATAAAAGTATCAAGCTGTGAGGCAATGATAAAAAT  6350
                                                        
seq2  --------------------------------------------------  0

seq1  AATTTACTCTTGCATAACAATTTAATTTCAGAATTCTTTCAAATTTTTAG  6400
                                                        
seq2  --------------------------------------------------  0

seq1  TGTTTGTATATAAGAGACATCTACTGAAGGATTTTGAGGGACAAATGATA  6450
                                                        
seq2  --------------------------------------------------  0

seq1  GTTTCTTTACTTTGACAGTTGGGGAACTAAGATACTGTGAGGGTGTGTGA  6500
                                                        
seq2  --------------------------------------------------  0

seq1  TTTGAACAGAGTTTTGAGCAGAGCCAGGGGTAGAATCAGATCTTTTGACC  6550
                                                        
seq2  --------------------------------------------------  0

seq1  TGGGACCCTTTTTTTCTCAGGTGTTGCAATGGGCGCTGATGGTGGGAGTA  6600
                                                        
seq2  --------------------------------------------------  0

seq1  GTGTCCAAGCATTGGCCGTGTTTCTTCTTGGAGCTGCACTGGATAACCAG  6650
                                                        
seq2  --------------------------------------------------  0

seq1  TGGCTTCTCCCATTCATCCTGCCCTGGGTAAGATCCTGGAGATATAAACA  6700
                                                        
seq2  --------------------------------------------------  0

seq1  GAATAGGTCCCAGGTTTGCCCTTAGGGAGCTCGTGGGTTGGTTAGAAGGG  6750
                                                        
seq2  --------------------------------------------------  0

seq1  GATGGAAAGAATTATGGTAAGGTTTACAACATGGAAAGAAATGCATCATT  6800
                                                        
seq2  --------------------------------------------------  0

seq1  ATTTGAGCAGCAAACTCTGAGACAGTTGGGGAAGGTGGCATAAAGGTTAC  6850
                                                        
seq2  --------------------------------------------------  0

seq1  ATTAGAATTCAGGTCTGAGGGATGAAAGCTTTTGTTTTGTTTTATTTCAG  6900
                                                        
seq2  --------------------------------------------------  0

seq1  GATGAGAATGATTTGTCAGGAGAGGGTTATAGAAACATCAGGTTTCAGAG  6950
                                                        
seq2  --------------------------------------------------  0

seq1  AAGAACATGTGGGTTGAAGTATTGGCTAAATGAAGCCCCTCTGCTGACTT  7000
                                                        
seq2  --------------------------------------------------  0

seq1  GTCCAGACATGTTGAAGAAGAGCAGGGTAGATCTATCTGCTCTCAAGACC  7050
                                                        
seq2  --------------------------------------------------  0

seq1  CTATCCACTGTGGGAACCAGTTCCCCTGGCAGCTCATACAGTCTCCTGAG  7100
                                                        
seq2  --------------------------------------------------  0

seq1  ATACTGCTTGGATTAGAAATGTTTGCTAGGACTGGGGAGATGACTCAATT  7150
                                                        
seq2  --------------------------------------------------  0

seq1  GCTAATGTGCTCACTAAACAAGCCTGAAGTTTGGATCCTCAGTATCCACC  7200
                                                        
seq2  --------------------------------------------------  0

seq1  AAAAACCAAACCAAACCAAAACAGGTACACCAGTGCACCTCGGTAACCCC  7250
                                                        
seq2  --------------------------------------------------  0

seq1  AGTGCTGTGGGTGCGGTGGGGTGATGGCAGCAGGGGCAGAGCTGTCAAGA  7300
                                                        
seq2  --------------------------------------------------  0

seq1  GCTTGTTGTCCAGCTTGTCTAGTTGAATGTCAAGCTCCAGCTTCGGCTAA  7350
                                                        
seq2  --------------------------------------------------  0

seq1  AGGACCTGTTTCAAAAAATAAGGTAGAGGGCTGTGTGTGGTAGTATACAT  7400
                                                        
seq2  --------------------------------------------------  0

seq1  CCTTAACCTAGCACTTGGGAAACAGAGGTGGGCTGATCTTTTGAATTTGA  7450
                                                        
seq2  --------------------------------------------------  0

seq1  GCCAGCTTGTTCTGCAGAGTGAGTTTCTGGACAGCTAAAGCTACATAGAG  7500
                                                        
seq2  --------------------------------------------------  0

seq1  AGACACTGTCTCCAAACAACAACCACAACCACAATCACATGATGAGGCAG  7550
                                                        
seq2  --------------------------------------------------  0

seq1  AAAGTGCTAGGGGAAGACATCTCTTTTTTTTTTTCTTTTTTAAAGATTTA  7600
                                                        
seq2  --------------------------------------------------  0

seq1  TTTTATTTTTTATGTGAATAACTGTCTTCAGACACACCAAAAACAAGGCA  7650
                                                        
seq2  --------------------------------------------------  0

seq1  TCAGATTCCATCACAGATGGTTGTGAGCCACCATGTGGTTGCTGGGATTT  7700
                                                        
seq2  --------------------------------------------------  0

seq1  GAACTCAGGACCTCCTAAAGAGCAGTCAGTGCTCTCAACCACTGAGCCAC  7750
                                                        
seq2  --------------------------------------------------  0

seq1  CTCTCCTGCCCAGAAAGTAAGAAAAGCCACTATGTTTCTCCTGGTTTTGA  7800
                                                        
seq2  --------------------------------------------------  0

seq1  ACTGGGGACCTCTTGCATGTTAGGCGACACTATTGAAACACCCTAGGGGA  7850
                                                        
seq2  --------------------------------------------------  0

seq1  AGACATTTGACATTGACCTTTGTCTTCCACTTTGGTGCTCACCAGCAGGC  7900
                                                        
seq2  --------------------------------------------------  0

seq1  CCACACATGTGTATAACACACACACACACACACACACACACACACACACA  7950
                          | | | | | ||||||||||||||||||||
seq2  --------------------CCCCCCCCCCCACACACACACACACACACA  30

seq1  CACACACACACACACACACACATTTGTTTGCTGGCTTTTCATTTTTTTCT  8000
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CACACACACACACACACACACATTTGTTTGCTGGCTTTTCATTTTTTTCT  80

seq1  TTGGTTCTTGTTTCTTCTCATCCTTTTCTCAATTTAAAATATTTATCCTT  8050
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGGTTCTTGTTTCTTCTCATCCTTTTCTCAATTTAAAATATTTATCCTT  130

seq1  CATAACTATTACCCTTCATCTTTTGTGCATGTGTGATGCAGTGTGCGTGT  8100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATAACTATTACCCTTCATCTTTTGTGCATGTGTGATGCAGTGTGCGTGT  180

seq1  GTATGTGTGTGTGTCTGTGTCTGTGATGGAGTACATGTGGAGGTCAATAG  8150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTATGTGTGTGTGTCTGTGTCTGTGATGGAGTACATGTGGAGGTCAATAG  230

seq1  ACAAGCTCAGGTTTTGGCTCTTGCCTTGTTTGAGTCAGGGTCTCTTCACC  8200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACAAGCTCAGGTTTTGGCTCTTGCCTTGTTTGAGTCAGGGTCTCTTCACC  280

seq1  ACTTTGTGAGCTGGTTGGCTGGTGAGTGAGTTTATGGAAGTTTCTTGATT  8250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTTTGTGAGCTGGTTGGCTGGTGAGTGAGTTTATGGAAGTTTCTTGATT  330

seq1  CTGACTCCTGACTGCCATTTTTCTGTAGAGTTTCCATGGAGCTACAGATG  8300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGACTCCTGACTGCCATTTTTCTGTAGAGTTTCCATGGAGCTACAGATG  380

seq1  CTTGTGTTACTGAGATCAACTTTTTAAGTCTTATTTACTTTAGTATTATT  8350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTGTGTTACTGAGATCAACTTTTTAAGTCTTATTTACTTTAGTATTATT  430

seq1  TTTTTGGGGGGAATCTGAATTC  8372
      ||||||||||||||||||||||
seq2  TTTTTGGGGGGAATCTGAATTC  452

seq1: chr1_88556940_88557578
seq2: B6Ng01-025C12.g_69_707

seq1  GAATTCTCATGCTGTGTAAATAGGCATTAATCTTCTTTTCAGGTATCTAT  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCTCATGCTGTGTAAATAGGCATTAATCTTCTTTTCAGGTATCTAT  50

seq1  GTACCTTCTTCACACAGCCACAGAAAACACAGAGGTGAGAGGTAGGAAGT  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTACCTTCTTCACACAGCCACAGAAAACACAGAGGTGAGAGGTAGGAAGT  100

seq1  CTGCCCCTACTCCATAAGCTTAACAACGTGAAGGAAACCAAAGTCACAAC  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGCCCCTACTCCATAAGCTTAACAACGTGAAGGAAACCAAAGTCACAAC  150

seq1  CAGGTAGGGTAAGGTAGTGATGCTGCCACAGGCCAAAAATGTGGGCCTTA  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGGTAGGGTAAGGTAGTGATGCTGCCACAGGCCAAAAATGTGGGCCTTA  200

seq1  TTCAGAAATAAGCCGTCAACCAAGCACATAAGTCAAAGCATGGAGACCGT  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCAGAAATAAGCCGTCAACCAAGCACATAAGTCAAAGCATGGAGACCGT  250

seq1  GCTGGGTGTGATGGTTGGTGTGGATTGTGACAAGCACAGCTGTAAGGGCT  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCTGGGTGTGATGGTTGGTGTGGATTGTGACAAGCACAGCTGTAAGGGCT  300

seq1  TGTCTAGGTTAGTATGGCCTTTGAGCGAGCCTCCATCATCTGAACTGAAC  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTCTAGGTTAGTATGGCCTTTGAGCGAGCCTCCATCATCTGAACTGAAC  350

seq1  TGGTTGGGGTGGGAAGACCCATCCTAATTGCTGAACAAATAGAAGGGGTC  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGTTGGGGTGGGAAGACCCATCCTAATTGCTGAACAAATAGAAGGGGTC  400

seq1  TGCCCATCATTCACCACTCTCTGCCTGTCGTTGGATCGGTGTGACCAGCT  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGCCCATCATTCACCACTCTCTGCCTGTCGTTGGATCGGTGTGACCAGCT  450

seq1  GCTTCAGGCTCCTGCCGTGATGGGCTGTCCCCGAAAACAGCGAGCCAGAA  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCTTCAGGCTCCTGCCGTGATGGGCTGTCCCCGAAAACAGCGAGCCAGAA  500

seq1  CAAATGCTTTCTTAGATTGCTTCTGTTAGTTATGTTATCGAAGTCTCTGT  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAAATGCTTTCTTAGATTGCTTCTGTTAGTTATGTTATCGAAGTCTCTGT  550

seq1  TACTGATTTATGGACCCAGTGACTCAGTGAGAAATTCCACTCCCTGAAGG  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TACTGATTTATGGACCCAGTGACTCAGTGAGAAATTCCACTCCCTGAAGG  600

seq1  AAGAGGAGGAGAAGGGGAGAGAGGAGGAAGAGAAGGAGG  639
      ||||||||||||||||||||||||||||||||||||| |
seq2  AAGAGGAGGAGAAGGGGAGAGAGGAGGAAGAGAAGGATG  639