BAC Information

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BAC

Clone NameB6Ng01-025G01
Chromosome1 (Build37)
Map Location 112,268,548 - 112,269,429
singlet/doubletsinglet
Overlap genenone
Upstream geneEG666508, Cdh7
Downstream geneLOC100041429, EG626652, Cdh19
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-025G01.b
ACCDH856747
length878
definitionDH856747|Mus musculus domesticus DNA, BAC clone: B6Ng01-025G01, 5' end.
singlet/doubletsinglet---
BLAST hituniqueno hit data
sequence
gaattctattattgccgtttctacattaaatgtataaatatacacactta
cagcatcctttataatgagtcaacctaaaggggatcattattgtgaatgg
ttagattttataatacgctaatgatgtcatgtaaagtatgatcattataa
tagcattactatcgaattttctggaaataagatggagtaatgacagtgca
tcccttcctgtgctgtttataaagtttatggatttcactggagctgggct
tctgaattatgaataaataatcaattaagttcaattttaaattgatattt
tcagtacagcactataaaatgtcacttctcagaaatgaaatgtagcacag
atatctcatgtctatcaaagttagcaaattttagttcctcttccctattc
ttcattttccagtattactaatgaaatctgacaaatctgttaaagccttt
gtctcccatttttaagtgtcctaacaataaatactatattgctaatatct
ctccttaaacattcctgatttttcttcttttctaaagtgtcccaggccta
ccaattgtcctgatctggttctctgactttcctccaagatgtgaactggt
cttctatcttaccagatgcattaaaattggacccaagcatattgccagaa
ggataggaatgaatgaacatctgtgagtaaataactgatacatttgccaa
tgactcagtgatcatgtattcatagataaatacattttaccatcctacag
aattgtataagtctctaaaactggttcctattgctgcgaaagtacctttc
caaatcaatgctaagagacccatagaaattctcaaaatgtgagagagaat
ctcatcatatttttgatatgtaaacatt
quality valuesOpen.




Alignment Information

BAC End 1BAC End 2
seq1: chr1_112268548_112269429
seq2: B6Ng01-025G01.b_36_913

seq1  GAATTCATATTATTTATGTTTATACATTAAATATATAAATATACACACTT  50
      |||||| |||||||   |||| |||||||||| |||||||||||||||||
seq2  GAATTC-TATTATTGCCGTTTCTACATTAAATGTATAAATATACACACTT  49

seq1  ACAGTATCATTTATAATGAATCAACAGAAATGTTTTTATTATTGTGAATA  100
      |||| ||| |||||||||| |||||  ||| |   | |||||||||||| 
seq2  ACAGCATCCTTTATAATGAGTCAACCTAAAGGGGATCATTATTGTGAATG  99

seq1  GTTAGATTTTATAATACGCTAATGATCTCATGTAAAGTATGATCATTATA  150
      |||||||||||||||||||||||||| |||||||||||||||||||||||
seq2  GTTAGATTTTATAATACGCTAATGATGTCATGTAAAGTATGATCATTATA  149

seq1  ATAGCATTACTATTGAATTTTCTGGAAATAAGATGCAGTAATGACATTTT  200
      ||||||||||||| ||||||||||||||||||||| |||||||||| |  
seq2  ATAGCATTACTATCGAATTTTCTGGAAATAAGATGGAGTAATGACAGTGC  199

seq1  AGCCCTTCCTGTGCTGTTTATAAAGTTTATGGATTTCACTGGAGCTGGTC  250
      | |||||||||||||||||||||||||||||||||||||||||||||| |
seq2  ATCCCTTCCTGTGCTGTTTATAAAGTTTATGGATTTCACTGGAGCTGGGC  249

seq1  TTCTGAATTATGAATAAATAATCAATTAAGTTCAATTTTAAATTGATATT  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCTGAATTATGAATAAATAATCAATTAAGTTCAATTTTAAATTGATATT  299

seq1  TTCAGTACAGCACTATAAAATGTCACTTCTCAGAAATGAAATGTAACACA  350
      ||||||||||||||||||||||||||||||||||||||||||||| ||||
seq2  TTCAGTACAGCACTATAAAATGTCACTTCTCAGAAATGAAATGTAGCACA  349

seq1  GATATCTCATGTCTATCAAAGTTAGCAAATTTTAGTTCCTCTTCCCTATT  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GATATCTCATGTCTATCAAAGTTAGCAAATTTTAGTTCCTCTTCCCTATT  399

seq1  CTTCATTTTTAAGTTTTAAGAATGAAATCTGACAGATCTGTTAAAGCCTT  450
      |||||||||  ||| |||  |||||||||||||| |||||||||||||||
seq2  CTTCATTTTCCAGTATTACTAATGAAATCTGACAAATCTGTTAAAGCCTT  449

seq1  TGTATCCCATTTTTAAGTGTCCTAATAATAAATACTATATTTCTAATATC  500
      ||| ||||||||||||||||||||| ||||||||||||||| ||||||||
seq2  TGTCTCCCATTTTTAAGTGTCCTAACAATAAATACTATATTGCTAATATC  499

seq1  TCTCAATAAACATTCCTGATTTTTCTTCTTTTCTAAAGTGTCCCAGGCCT  550
      ||||  ||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTCCTTAAACATTCCTGATTTTTCTTCTTTTCTAAAGTGTCCCAGGCCT  549

seq1  ACCAATTGTCCTGATCTGGTTCTCTGACTTTCTTCAAAGATGTGAACTGG  600
      |||||||||||||||||||||||||||||||| || ||||||||||||||
seq2  ACCAATTGTCCTGATCTGGTTCTCTGACTTTCCTCCAAGATGTGAACTGG  599

seq1  TCTTTTATCTTAACAGATGCATTAAAAATGGAGCCAAGCATATTGCTAGA  650
      |||| ||||||| |||||||||||||| |||| ||||||||||||| |||
seq2  TCTTCTATCTTACCAGATGCATTAAAATTGGACCCAAGCATATTGCCAGA  649

seq1  AGGATTGGAATGATTGTACATCTGTATGTAAATAACTGATACATTTACCA  700
      ||||| ||||||| || ||||||||  ||||||||||||||||||| |||
seq2  AGGATAGGAATGAATGAACATCTGTGAGTAAATAACTGATACATTTGCCA  699

seq1  ATGACTAAATGATCATGTATTCATATATAAAATACATTTTACCATCAAAG  750
      |||||| | |||||||||||||||| || |||||||||||||||||  | 
seq2  ATGACTCAGTGATCATGTATTCATAGAT-AAATACATTTTACCATCCTAC  748

seq1  AAAATTGTATAGGTCTCTAAAACTGGTTTTTATTAACTGTGAAAGTAAGT  800
      | ||||||||| ||||||||||||||||  ||||  ||| |||||| |  
seq2  AGAATTGTATAAGTCTCTAAAACTGGTTCCTATT-GCTGCGAAAGT-ACC  796

seq1  TTTCCAGTTCAGT-AGAAGAGACCCAAAATAATTCTCAAAATGTTGAGAA  849
      ||||||  ||| |   |||||||||| |  ||||||||||||| ||||| 
seq2  TTTCCAAATCAATGCTAAGAGACCCATAGAAATTCTCAAAATG-TGAGAG  845

seq1  TGAATCTCATCATATTTTTATTATATAAACATT  882
       ||||||||||||||||||  ||| ||||||||
seq2  AGAATCTCATCATATTTTTGATATGTAAACATT  878