BAC Information

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BAC

Clone NameB6Ng01-025G10
Chromosome1 (Build37)
Map Location 57,953,562 - 57,954,448
singlet/doubletsinglet
Overlap gene2810022L02Rik
Upstream geneSatb2, EG329160, 9130024F11Rik, LOC100042869, LOC383509, 1700066M21Rik, 1110034B05Rik, 9430016H08Rik, LOC667339
Downstream geneKctd18, Sgol2, Aox1, Aox3, Aox4, Aox3l1, EG628262, Bzw1, Clk1, Ppil3, Nif3l1, Orc2l, BC049806, Ndufb3, EG667397, Als2cr12, Cflar, LOC100042431, Casp8, EG667419
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-025G10.bB6Ng01-025G10.g
ACCDH856762DH856763
length892620
definitionDH856762|Mus musculus domesticus DNA, BAC clone: B6Ng01-025G10, 5' end.DH856763|Mus musculus domesticus DNA, BAC clone: B6Ng01-025G10, 3' end.
singlet/doubletsinglet---
BLAST hituniqueno hit data
sequence
gaattcaataatgataatagaccagcttttcctcaaattgatttatagat
tgagtacaaattcaactaaaattctgccagatttttttttattgaaatac
acaagctgattcttagatttatattggaatgcaaagatctgtgccaaaat
agtctttaaaataaaatagaacaaagctggaggacatacattatcaaata
ctaagtcttcttatctagataaagtaagcaaggaaagacaaatacatcag
tggatacaacagagcccagacaccacagcacataatcacttgatttccaa
gagggatgtcgaggcaacttaggggaagaagatcacctcagacccgctaa
gctcttttgttttgatttcaacattttccatttcacatattagagttgag
ggcagagagttgtgcttacttttattctatataaaagccagagctagcac
atcagggaaagtaaagtttaccccatgtaaagtgtccgttgagtctacat
aaatcagacagctaaatgattctcgttaagtcacatactatctgtattaa
gatatgctaagtatttttcggttagaaagggttctagtaattgtgaagtt
caaaccacagaagtttctgggaggtattgttaaggtaaatacctagaaaa
gaattaaataaaaatatgtatagcttttattgaaatctgaacaaattggc
tctttttcagagataacatttctttccaagatgtcacaaatatgggtcaa
gtcctcaaatgaatattaaaggcacagagactaaggtaccctattagact
attgtaccctatcgtggaattgccctagctatgcaaagcactgaagtaat
gctggctcactggtatacagttccactcactcgttcagtatt
gaattccttcatgaccaggatgtggtagcaagggtgtctgtgccttccca
cgctgagaaaatagctcagttgcttaatctgctcactcaaaaaggcaccc
attgaagtgtggggactgagggaatggtcacaacatttgactaatgcatg
gtttactgatgatttatcagccattggtggaacagaaactattggaaagt
gacagcctatagactcgggatggaatagccaatactgaggaatgaaccac
aaaatcagcatagcactattagctataagacaaacaaccaggaaagcaaa
agggaaatctctgttttctccaattcagtttctcctgtaccattgtgtgt
gcaatggaaaaccaccaatgcgggaagagggtgcggcctcatgggtcaag
atggcgctctggctcattgccaggccccgtgaaccccacatgtttactgc
cttgcctgagcatgcacagtgaaaaagcatgtgtattcctcatgatctgg
atctgtcagcctacgggtgaccgacctgagttcgcgcctggagcatgtgt
gatttctgattggatgaggtagtgtggagcgagatgaggtcagtatagga
ggtttgtttttttttgttct
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr1_57953562_57954448
seq2: B6Ng01-025G10.b_34_925

seq1  GAATTCAATAATGATAATAGACCAGCTTTTCCTCAAATTGATTTATAGAT  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCAATAATGATAATAGACCAGCTTTTCCTCAAATTGATTTATAGAT  50

seq1  TGAGTACAAATTCAACTAAAATTCTGCCAGATTTTTTTTTATTGAAATAC  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGAGTACAAATTCAACTAAAATTCTGCCAGATTTTTTTTTATTGAAATAC  100

seq1  ACAAGCTGATTCTTAGATTTATATTGGAATGCAAAGATCTGTGCCAAAAT  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACAAGCTGATTCTTAGATTTATATTGGAATGCAAAGATCTGTGCCAAAAT  150

seq1  AGTCTTTAAAATAAAATAGAACAAAGCTGGAGGACATACATTATCAAATA  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTCTTTAAAATAAAATAGAACAAAGCTGGAGGACATACATTATCAAATA  200

seq1  CTAAGTCTTCTTATCTAGATAAAGTAAGCAAGGAAAGACAAATACATCAG  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTAAGTCTTCTTATCTAGATAAAGTAAGCAAGGAAAGACAAATACATCAG  250

seq1  TGGATACAACAGAGCCCAGACACCACAGCACATAATCACTTGATTTCCAA  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGATACAACAGAGCCCAGACACCACAGCACATAATCACTTGATTTCCAA  300

seq1  GAGGGATGTCGAGGCAACTTAGGGGAAGAAGATCACCTCAGACCCGCTAA  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGGGATGTCGAGGCAACTTAGGGGAAGAAGATCACCTCAGACCCGCTAA  350

seq1  GCTCTTTTGTTTTGATTTCAACATTTTCCATTTCACATATTAGAGTTGAG  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCTCTTTTGTTTTGATTTCAACATTTTCCATTTCACATATTAGAGTTGAG  400

seq1  GGCAGAGAGTTGTGCTTACTTTTATTCTATATAAAAGCCAGAGCTAGCAC  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGCAGAGAGTTGTGCTTACTTTTATTCTATATAAAAGCCAGAGCTAGCAC  450

seq1  ATCAGGGAAAGTAAAGTTTACCCCATGTAAAGTGTCCGTTGAGTCTACAT  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATCAGGGAAAGTAAAGTTTACCCCATGTAAAGTGTCCGTTGAGTCTACAT  500

seq1  AAATCAGACAGCTAAATGATTCTCGTTAAGTCACATACTATCTGTATTAA  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAATCAGACAGCTAAATGATTCTCGTTAAGTCACATACTATCTGTATTAA  550

seq1  GATATGCTAAGTA-TTTTCGGTTAGAAAGGGTTCTAGTAATTGTGAAGTT  599
      ||||||||||||| ||||||||||||||||||||||||||||||||||||
seq2  GATATGCTAAGTATTTTTCGGTTAGAAAGGGTTCTAGTAATTGTGAAGTT  600

seq1  CAAACCACAGAAGTTTCTGGGAGGTATTGTTAAGGTAAATACCTAGAAAA  649
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAAACCACAGAAGTTTCTGGGAGGTATTGTTAAGGTAAATACCTAGAAAA  650

seq1  GAATTAAATAAAAATATGTATAGCTTTTATTGAAATCTGAACAAATTGGC  699
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTAAATAAAAATATGTATAGCTTTTATTGAAATCTGAACAAATTGGC  700

seq1  TC-TTTTCAGAGATAACATTTCTTTCCAAGATGTCACAAATATGGGTCAA  748
      || |||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTTTTTCAGAGATAACATTTCTTTCCAAGATGTCACAAATATGGGTCAA  750

seq1  GTCCTC-AATGAATATTAAAGGCACAGAGACT-AGGTA-CCTATTAGACT  795
      |||||| ||||||||||||||||||||||||| ||||| |||||||||||
seq2  GTCCTCAAATGAATATTAAAGGCACAGAGACTAAGGTACCCTATTAGACT  800

seq1  A-TGTACCCTATCGTTGGAATTGCCCTAGCTATGCAAAGCACTGAAGTAA  844
      | |||||||||||| |||||||||||||||||||||||||||||||||||
seq2  ATTGTACCCTATCG-TGGAATTGCCCTAGCTATGCAAAGCACTGAAGTAA  849

seq1  TGCTGGCTCACTGGTATACAGTTCCACTCACTCGTTCAGTATT  887
      |||||||||||||||||||||||||||||||||||||||||||
seq2  TGCTGGCTCACTGGTATACAGTTCCACTCACTCGTTCAGTATT  892