BAC Information

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BAC

Clone NameB6Ng01-026A06
Chromosome1 (Build37)
Map Location 164,653,087 - 164,654,067
singlet/doubletsinglet
Overlap geneBat2d
Upstream geneLOC100039623, LOC269134, Fasl, AI848100, EG665109, Pigc, Dnm3, LOC100039703, Dnm3os, 5630401D24Rik, Vamp4, LOC435651, Myoc
Downstream geneFmo4, Fmo1, Fmo2, Fmo6, Fmo3, 4921528O07Rik, Prrx1, LOC100039597, Scyl1bp1, LOC665237, Gm207
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-026A06.bB6Ng01-026A06.g
ACCDH857179DH857180
length9851,138
definitionDH857179|Mus musculus domesticus DNA, BAC clone: B6Ng01-026A06, 5' end.DH857180|Mus musculus domesticus DNA, BAC clone: B6Ng01-026A06, 3' end.
singlet/doubletsinglet---
BLAST hituniqueno hit data
sequence
gaattcttatatcttattctgaaggcagacaggagaagactggcttccag
gcagctaggacaagggtattaaagcctgtatccacaatgataacacttcc
tccaacagggccacacctcttaatagtgccactccctggggccaagcata
tacaagccatcacactgtgtaaccctaaagggcttagaacttaacagtgg
atcaggccagcctccaacatgaagctattttcccactttcaccttccaag
ttgtgtagtttgaactttcttctcttaacattttaagttttttacttaaa
atagattgcctgaaaacatttcaaaactagcatttccccttcccatattc
ccagtatatagtgttccatatttagaagttaaggggttctggtgggtggg
tttgttttgttttttgagacaaattttgctggggtcccaagatggcttaa
tattttgagtggattgtttactttttaccttcaattaatgttgtaggtta
taaactgagtttatagagctctactttaacattggggactagtcagagat
tgttaactcctgttcatgtatattatttgttgaataaaatgtataataga
gtgatgaacagtagatgttctaaggaaaattgatgttactgatcttttag
ttgcagctcgacatgggttacaaagtctttggaaaagttggtatttcacg
gcgaatgcccccacctgctaaccttccaagtctcaaagcagagaacaaag
gcaatgatcctatgtgaatattgtgcccaaagatgggacaggatgggcat
cgaaacaagagcaacatgaagaagaaaagtgagtcagaatctgttaagaa
taaaaacacttctctcatttgtagaaactgccaccgctgtgcactgttca
gcccatagaaacactctatgacacttatatcatagagttctcctcgatga
aaaccagtcagcttactcttatgccacaacctcag
gaattcagaacatggtgttagatcccctggaactgaagttagagatagtt
gtgagccactaagttggtggtaggaaccaaacctgggtcctttgtaaaag
taacaagtgctcttaactgctgagccatctcttcagctgccatacacacc
cccaattccttttttacccctcagaattgctttggatgtttagcttcttt
acttccatatgaatttagaaatgttttttccatttttgtgaagaatgtca
ttggaattttggtgagaattgtactggctctgtagattgcctttcataat
acagcaaataatctctgaacacaggaagccttcttttgtttgctgttttc
tacagctcttcatccatgctttagagttttcagcatggggtctttcccat
ctttagttacatttatgaattcatgacttcaaagtgtactacagagccat
agtagaacaccgttgtgctgagccaaaactaggcacatagagaccaatgg
aatagaagacccagagggaaaataactctacacagtcacgtccatcccat
tcctaatgaaggtgtcaaaacatgcactagagaaatgctgcctctttaat
aaatggtgtggggacactgatatctacctgaggaagactgaaactgggtc
cctttcttctactgtgcacaaaagtcagctcaaaaatgagtctaaagacc
taagacgttggaactactagaggaaagcacagtgggagcatgtgcagagc
aagactgatggctttgcatcaaaccaaagatctgtgcagcagaagacaga
gtcagcatgacgggagaagatctttgccagctgctcccccaatgtgggat
tagtagcacattaataaagaagaatagcaaaagcaggtaatctagttact
gaagacacttgtgagagtacacatagccaatacgttccaaaggattgtca
tcgtcttcagctgtcaggaattgtaattagactaaattaagatttacctc
gctggcagtggggctcttgtcttatcccactctcagacttaaggcagtgg
acctctgagttggagccacccggtctcaattagctctaggacagttggga
tgccaaaaaaccttatttggttgtcccgtttagtaaaa
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr1_164653087_164654067
seq2: B6Ng01-026A06.b_46_1020 (reverse)

seq1  GGCATCAAAGAGTAAGCTGACTTGTGTTTTCATCTGAGGAAGAACTCTCT  50
      |||||  |||||||||||||||   ||||||||| |||| |||||||| |
seq2  GGCAT--AAGAGTAAGCTGACT--GGTTTTCATC-GAGG-AGAACTCTAT  44

seq1  GAATTATAAGTGTCATAGAGTGTTTCTATTGGCTGAACAGTGCACAGCGG  100
      ||  ||||||||||||||||||||||||| ||||||||||||||||||||
seq2  GA--TATAAGTGTCATAGAGTGTTTCTATGGGCTGAACAGTGCACAGCGG  92

seq1  TGGCAGTTTCCTAC-AATGAGAGAAGTG-TTTTATTCTTAACAGATTCTG  148
      ||||||||| |||| ||||||||||||| |||||||||||||||||||||
seq2  TGGCAGTTT-CTACAAATGAGAGAAGTGTTTTTATTCTTAACAGATTCTG  141

seq1  ACTCACTTTTCTTCTTCATGTTGCTCTTGTTTCGATGCCCATCCTGTCCC  198
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTCACTTTTCTTCTTCATGTTGCTCTTGTTTCGATGCCCATCCTGTCCC  191

seq1  ATCTTTGGGCACAATATTCACATTAGGATCATTGCCTTTGTTCTCTGCTT  248
      |||||||||||||||||||||| |||||||||||||||||||||||||||
seq2  ATCTTTGGGCACAATATTCACA-TAGGATCATTGCCTTTGTTCTCTGCTT  240

seq1  TGAGACTTGGAAGGTTAGCAGGTGGGGGCATTCGCCGTGAAATACCAACT  298
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGAGACTTGGAAGGTTAGCAGGTGGGGGCATTCGCCGTGAAATACCAACT  290

seq1  TTTCC-AAGACTTTGTAACCCATGTCGAGCTGCAACTAAAAGATCAGTAA  347
      ||||| ||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTCCAAAGACTTTGTAACCCATGTCGAGCTGCAACTAAAAGATCAGTAA  340

seq1  CATCAA-TTTCCTTAGAACATCTACTGTTCATCACTCTATTATACATTTT  396
      |||||| |||||||||||||||||||||||||||||||||||||||||||
seq2  CATCAATTTTCCTTAGAACATCTACTGTTCATCACTCTATTATACATTTT  390

seq1  ATTCAACAAATAATATACATGAACAGGAGTTAACAATCTCTGACTAGTCC  446
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTCAACAAATAATATACATGAACAGGAGTTAACAATCTCTGACTAGTCC  440

seq1  CCAATGTTAAAGTAGAGCTCTATAAACTCAGTTTATAACCTACAACATTA  496
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCAATGTTAAAGTAGAGCTCTATAAACTCAGTTTATAACCTACAACATTA  490

seq1  ATTGAAGGTAAAAAGTAAACAATCCACTCAAAATATTAAGCCATCTTGGG  546
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTGAAGGTAAAAAGTAAACAATCCACTCAAAATATTAAGCCATCTTGGG  540

seq1  ACCCCAGCAAAATTTGTCTCAAAAAACAAAACAAACCCACCCACCAGAAC  596
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACCCCAGCAAAATTTGTCTCAAAAAACAAAACAAACCCACCCACCAGAAC  590

seq1  CCCTTAACTTCTAAATATGGAACACTATATACTGGGAATATGGGAAGGGG  646
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCCTTAACTTCTAAATATGGAACACTATATACTGGGAATATGGGAAGGGG  640

seq1  AAATGCTAGTTTTGAAATGTTTTCAGGCAATCTATTTTAAGTAAAAAACT  696
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAATGCTAGTTTTGAAATGTTTTCAGGCAATCTATTTTAAGTAAAAAACT  690

seq1  TAAAATGTTAAGAGAAGAAAGTTCAAACTACACAACTTGGAAGGTGAAAG  746
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAAAATGTTAAGAGAAGAAAGTTCAAACTACACAACTTGGAAGGTGAAAG  740

seq1  TGGGAAAATAGCTTCATGTTGGAGGCTGGCCTGATCCACTGTTAAGTTCT  796
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGGAAAATAGCTTCATGTTGGAGGCTGGCCTGATCCACTGTTAAGTTCT  790

seq1  AAGCCCTTTAGGGTTACACAGTGTGATGGCTTGTATATGCTTGGCCCCAG  846
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGCCCTTTAGGGTTACACAGTGTGATGGCTTGTATATGCTTGGCCCCAG  840

seq1  GGAGTGGCACTATTAAGAGGTGTGGCCCTGTTGGAGGAAGTGTTATCATT  896
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGAGTGGCACTATTAAGAGGTGTGGCCCTGTTGGAGGAAGTGTTATCATT  890

seq1  GTGGATACAGGCTTTAATACCCTTGTCCTAGCTGCCTGGAAGCCAGTCTT  946
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTGGATACAGGCTTTAATACCCTTGTCCTAGCTGCCTGGAAGCCAGTCTT  940

seq1  CTCCTGTCTGCCTTCAGAATAAGATATAAGAATTC  981
      |||||||||||||||||||||||||||||||||||
seq2  CTCCTGTCTGCCTTCAGAATAAGATATAAGAATTC  975