BAC Information

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BAC

Clone NameB6Ng01-026L03
Chromosome1 (Build37)
Map Location 97,905,164 - 98,026,205
singlet/doubletdoublet
Overlap genenone
Upstream geneLOC383603, Tmem157, LOC100041686, Rnu7-ps2, St8sia4
Downstream geneGm1833, Slco4c1, EG329217, Slco6b1, LOC670708, LOC623430, Slco6c1
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-026L03.bB6Ng01-026L03.g
ACCDH857661DH857662
length1,0591,073
definitionDH857661|Mus musculus domesticus DNA, BAC clone: B6Ng01-026L03, 5' end.DH857662|Mus musculus domesticus DNA, BAC clone: B6Ng01-026L03, 3' end.
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(97,905,164 - 97,906,232)(98,025,117 - 98,026,205)
sequence
gaattcctgcttttataactcagtcactggatcacaaacctaagagctct
tgggggtgttgataaagatatgaacaattgagtacatgtaatttaaaatc
atcaattgccatatagaatgtgatttctacctttgggtcagttatttttg
tttttctataatgtaatgtagttcatgaaccaagactttcaataaagaac
agagaaagagaataaaccaatatggagagagatatgtttaaatggtctct
taagaaccaatgttaaaataaaaccaacatttcaaaaattatgctatgtg
aaataaataatccagccacaggacaaaatagtatcatcaagaagcaaaca
aggtttgaattatattatgtggaaaaagaaaaaagattcttcccattgag
tgatctggggaagtactctcattcttcctttgatcctttactgaagcttt
tccacaccatcaaaatgcacagaactgtgtctccagctgcatatgtagca
gaggatagcctaatgggccatcaatgggaggagaggcccttggtcttgtg
aagataatatgccccagtacaggggaatgccagggccaggaagcaggagt
gggtgtgttgggtagcagggcagggggaggatatagggtactttcaggat
agcatttgaaatgtaaatgaagaaaatatctaatgaaaaaaaaaaagaaa
tgcatagcttgtttctttttctacatttcgccaatattttaaattatata
tattcagacacatatatatacacatatatacacagaaaaacaccacacac
atacacacacacacacacacacacacacacacacacacacacacacacac
acatatatatatatgtgtatattacatgttcatgattgtgtgcagaagta
taaagagtgactttgtgtacacatgtgtgtatgtggaacaagaggttgat
gttatttccttccacattattttttgagaaaggttcaccaaaaccaggag
ctcctctgatatctagatttgcagttacacagaatgatgatcccatttct
acttcccag
gaattctttccaagccttgttttcctgttttagaaggggagaatgtgtga
gacaacagagggataccaagttctcttctctgccagttttgattctgaac
tgatttcccagaaaccttcctttagactgaatttcttagcactgtgtcac
atgtttacccataaattcagaagagtttggacaattatgtttgccagcta
gcaattttataactaatactgcaattcatcacagaaggtatgcagcaaaa
ccagttctgaatggtactctatggtttgacctgttttccatgattatatt
attttggcattagtacatttgattttaggcactagaaatttctctgtgac
tcataattcataacttactcaatgtacagtagactaatcttcaggcttac
attgatgaagcgagaaggggagggaatgttgcagaggaaatcctgaaaca
agcatgctactgagcatataggtgtctgtcttagtaatttcataaattaa
tcattcctgaaggcaattttattttataaatttgaaaaattaaacattac
tagataaagttgcataaattagaatggagagttctatattactaatatct
aaaacaggaccttttttccttcttaagccattgcaccgatctcttggaaa
tcctgactcataatgcatcatgttcatattctgaataaatagctcttgtt
cctggagttaaccacctgactgcctttggcatcaatcaggtctttaaagc
tgaactttaaagtacatgtaaaaaggctctttatctgtagcacacattag
tcagatattccaaactcactgttaaagggaagtgccattataactgatag
aaatgtaaatgccttttttgtcatttgcaaatatatctatatgagaattt
gtttatatcatatttatgctaaattcaaccagtaattttgcataggtatg
tcattaaatttagctgagggatagatttggtgtacagaattactatttct
ggatactctaagactatttatctatgatattattactttaaatcttaaat
gcatgtgaatgtgtggttgcatt
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr1_97905164_97906232
seq2: B6Ng01-026L03.b_45_1103

seq1  GAATTCCTGCTTTTATAACTCAGTCACTGGATCACAAACCTAAGAGCTCT  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCCTGCTTTTATAACTCAGTCACTGGATCACAAACCTAAGAGCTCT  50

seq1  TGGGGGTGTTGATAAAGATATGAACAATTGAGTACATGTAATTTAAAATC  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGGGGTGTTGATAAAGATATGAACAATTGAGTACATGTAATTTAAAATC  100

seq1  ATCAATTGCCATATAGAATGTGATTTCTACCTTTGGGTCAGTTATTTTTG  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATCAATTGCCATATAGAATGTGATTTCTACCTTTGGGTCAGTTATTTTTG  150

seq1  TTTTTCTATAATGTAATGTAGTTCATGAACCAAGACTTTCAATAAAGAAC  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTTTCTATAATGTAATGTAGTTCATGAACCAAGACTTTCAATAAAGAAC  200

seq1  AGAGAAAGAGAATAAACCAATATGGAGAGAGATATGTTTAAATGGTCTCT  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGAGAAAGAGAATAAACCAATATGGAGAGAGATATGTTTAAATGGTCTCT  250

seq1  TAAGAACCAATGTTAAAATAAAACCAACATTTCAAAAATTATGCTATGTG  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAAGAACCAATGTTAAAATAAAACCAACATTTCAAAAATTATGCTATGTG  300

seq1  AAATAAATAATCCAGCCACAGGACAAAATAGTATCATCAAGAAGCAAACA  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAATAAATAATCCAGCCACAGGACAAAATAGTATCATCAAGAAGCAAACA  350

seq1  AGGTTTGAATTATATTATGTGGAAAAAGAAAAAAGATTCTTCCCATTGAG  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGTTTGAATTATATTATGTGGAAAAAGAAAAAAGATTCTTCCCATTGAG  400

seq1  TGATCTGGGGAAGTACTCTCATTCTTCCTTTGATCCTTTACTGAAGCTTT  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGATCTGGGGAAGTACTCTCATTCTTCCTTTGATCCTTTACTGAAGCTTT  450

seq1  TCCACACCATCAAAATGCACAGAACTGTGTCTCCAGCTGCATATGTAGCA  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCCACACCATCAAAATGCACAGAACTGTGTCTCCAGCTGCATATGTAGCA  500

seq1  GAGGATAGCCTAATGGGCCATCAATGGGAGGAGAGGCCCTTGGTCTTGTG  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGGATAGCCTAATGGGCCATCAATGGGAGGAGAGGCCCTTGGTCTTGTG  550

seq1  AAGATAATATGCCCCAGTACAGGGGAATGCCAGGGCCAGGAAGCAGGAGT  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGATAATATGCCCCAGTACAGGGGAATGCCAGGGCCAGGAAGCAGGAGT  600

seq1  GGGTGTGTTGGGTAGCAGGGCAGGGGGAGGATATAGGGTACTTTCAGGAT  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGGTGTGTTGGGTAGCAGGGCAGGGGGAGGATATAGGGTACTTTCAGGAT  650

seq1  AGCATTTGAAATGTAAATGAAGAAAATATCTAATGAAAAAAAAAAAGAAA  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGCATTTGAAATGTAAATGAAGAAAATATCTAATGAAAAAAAAAAAGAAA  700

seq1  TGCATAGCTTGTTTCTTTTTCTACATTTCGCCAATATTTTAAATTATATA  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGCATAGCTTGTTTCTTTTTCTACATTTCGCCAATATTTTAAATTATATA  750

seq1  TATTCAGACACATATATATACACATATATACACAGAAAAACACCACACAC  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATTCAGACACATATATATACACATATATACACAGAAAAACACCACACAC  800

seq1  ATACACACACACACACACACACACACACACACACACACACACACACACAC  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATACACACACACACACACACACACACACACACACACACACACACACACAC  850

seq1  ACATATATATATATGTGTATATTACATGTTCATGATTGTGTGCAGAAGTA  900
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACATATATATATATGTGTATATTACATGTTCATGATTGTGTGCAGAAGTA  900

seq1  TGAAAGAGTGACTTTGTGTACACATGTGTGTATGTGGAAACAAGAGGTTG  950
      | ||||||||||||||||||||||||||||||||||| ||||||||||||
seq2  T-AAAGAGTGACTTTGTGTACACATGTGTGTATGTGG-AACAAGAGGTTG  948

seq1  ATGTCATTTCCCTTCCACATTATTTTTTGAGAAAGGGTCCACCAAAAACC  1000
      |||| |||| |||||||||||||||||||||||| ||| |||| ||||||
seq2  ATGTTATTT-CCTTCCACATTATTTTTTGAGAAA-GGTTCACC-AAAACC  995

seq1  AGGAGCT-CTCTGATTATCTAGATTTGCCAGTTA-ACAGCAGGAGTGATG  1048
      ||||||| |||||| |||||||||||| |||||| |||    || |||||
seq2  AGGAGCTCCTCTGA-TATCTAGATTTG-CAGTTACACA----GAATGATG  1039

seq1  ATCCCATTTCTACTTCGCCAG  1069
      |||||||||||||||| ||||
seq2  ATCCCATTTCTACTTC-CCAG  1059

seq1: chr1_98025117_98026205
seq2: B6Ng01-026L03.g_66_1138 (reverse)

seq1  AATGCAACACAAACATTTCACATGCATTTTAAGATTTTAAAATATATTAA  50
      |||||||| || ||| |||||||||| ||||||||||   ||  || |||
seq2  AATGCAAC-CACACA-TTCACATGCA-TTTAAGATTT---AAAGTAATAA  44

seq1  TATCATTAGATTAATATTAGTCTTAGAGTAATCCAGAAATAGTAATTTCT  100
      ||||| ||||| ||   |||||||||||| ||||||||||||||| ||||
seq2  TATCA-TAGATAAA---TAGTCTTAGAGT-ATCCAGAAATAGTAA-TTCT  88

seq1  GTACACCAAATCTATCACTCAGCTTAAATTTAATGACATAACCTATGCAA  150
      |||||||||||||||| |||||| ||||||||||||||| ||||||||||
seq2  GTACACCAAATCTATCCCTCAGC-TAAATTTAATGACAT-ACCTATGCAA  136

seq1  AATTACTGGTTGAATTTAGCAATAAATATGATATAAACAAATTCTCATAT  200
      |||||||||||||||||||| |||||||||||||||||||||||||||||
seq2  AATTACTGGTTGAATTTAGC-ATAAATATGATATAAACAAATTCTCATAT  185

seq1  AGATATATTTGCAAATGACAAAAAAAGGCATTTACATTTCTATCAGTTAT  250
      ||||||||||||||||||| ||||||||||||||||||||||||||||||
seq2  AGATATATTTGCAAATGAC-AAAAAAGGCATTTACATTTCTATCAGTTAT  234

seq1  AATGGCACTTCCCTTTAACAGTGAGTTTGGAATATCTGACTAATGTGTGC  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATGGCACTTCCCTTTAACAGTGAGTTTGGAATATCTGACTAATGTGTGC  284

seq1  TACAGATAAAGAGCCTTTTTACATGTACTTTAAAGTTCAGCTTTAAAGAC  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TACAGATAAAGAGCCTTTTTACATGTACTTTAAAGTTCAGCTTTAAAGAC  334

seq1  CTGATTGATGCCAAAGGCAGTCAGGTGGTTAACTCCAGGAACAAGAGCTA  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGATTGATGCCAAAGGCAGTCAGGTGGTTAACTCCAGGAACAAGAGCTA  384

seq1  TTTATTCAGAATATGAACATGATGCATTATGAGTCAGGATTTCCAAGAGA  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTATTCAGAATATGAACATGATGCATTATGAGTCAGGATTTCCAAGAGA  434

seq1  TCGGTGCAATGGCTTAAGAAGGAAAAAAGGTCCTGTTTTAGATATTAGTA  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCGGTGCAATGGCTTAAGAAGGAAAAAAGGTCCTGTTTTAGATATTAGTA  484

seq1  ATATAGAACTCTCCATTCTAATTTATGCAACTTTATCTAGTAATGTTTAA  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATATAGAACTCTCCATTCTAATTTATGCAACTTTATCTAGTAATGTTTAA  534

seq1  TTTTTCAAATTTATAAAATAAAATTGCCTTCAGGAATGATTAATTTATGA  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTTTCAAATTTATAAAATAAAATTGCCTTCAGGAATGATTAATTTATGA  584

seq1  AATTACTAAGACAGACACCTATATGCTCAGTAGCATGCTTGTTTCAGGAT  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATTACTAAGACAGACACCTATATGCTCAGTAGCATGCTTGTTTCAGGAT  634

seq1  TTCCTCTGCAACATTCCCTCCCCTTCTCGCTTCATCAATGTAAGCCTGAA  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCCTCTGCAACATTCCCTCCCCTTCTCGCTTCATCAATGTAAGCCTGAA  684

seq1  GATTAGTCTACTGTACATTGAGTAAGTTATGAATTATGAGTCACAGAGAA  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GATTAGTCTACTGTACATTGAGTAAGTTATGAATTATGAGTCACAGAGAA  734

seq1  ATTTCTAGTGCCTAAAATCAAATGTACTAATGCCAAAATAATATAATCAT  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTTCTAGTGCCTAAAATCAAATGTACTAATGCCAAAATAATATAATCAT  784

seq1  GGAAAACAGGTCAAACCATAGAGTACCATTCAGAACTGGTTTTGCTGCAT  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGAAAACAGGTCAAACCATAGAGTACCATTCAGAACTGGTTTTGCTGCAT  834

seq1  ACCTTCTGTGATGAATTGCAGTATTAGTTATAAAATTGCTAGCTGGCAAA  900
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACCTTCTGTGATGAATTGCAGTATTAGTTATAAAATTGCTAGCTGGCAAA  884

seq1  CATAATTGTCCAAACTCTTCTGAATTTATGGGTAAACATGTGACACAGTG  950
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATAATTGTCCAAACTCTTCTGAATTTATGGGTAAACATGTGACACAGTG  934

seq1  CTAAGAAATTCAGTCTAAAGGAAGGTTTCTGGGAAATCAGTTCAGAATCA  1000
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTAAGAAATTCAGTCTAAAGGAAGGTTTCTGGGAAATCAGTTCAGAATCA  984

seq1  AAACTGGCAGAGAAGAGAACTTGGTATCCCTCTGTTGTCTCACACATTCT  1050
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAACTGGCAGAGAAGAGAACTTGGTATCCCTCTGTTGTCTCACACATTCT  1034

seq1  CCCCTTCTAAAACAGGAAAACAAGGCTTGGAAAGAATTC  1089
      |||||||||||||||||||||||||||||||||||||||
seq2  CCCCTTCTAAAACAGGAAAACAAGGCTTGGAAAGAATTC  1073