BAC Information

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BAC

Clone NameB6Ng01-026M10
Chromosome1 (Build37)
Map Location 3,087,084 - 3,087,802
singlet/doubletsinglet
Overlap genenone
Upstream genenone
Downstream geneXkr4, LOC100038975, LOC664792
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-026M10.bB6Ng01-026M10.g
ACCDH857710DH857711
length7191,033
definitionDH857710|Mus musculus domesticus DNA, BAC clone: B6Ng01-026M10, 5' end.DH857711|Mus musculus domesticus DNA, BAC clone: B6Ng01-026M10, 3' end.
singlet/doubletsinglet---
BLAST hituniqueno hit data
sequence
gaattcttctgattggtttgtttcccatggcttgttcagactgctttctt
atgccattcatgaccacttcaccaggaagtggtattgcctacagtagtct
gggccttcccacttcaataatccaaaggcttgcctgcaagctgatctgat
gggggcatcttatcaattgagagtctctcttcccaggtgtctagtttgtg
tcaacttgacaaaacaaaaacaaaacaacaacaacaacaaaaagacaaca
aaaacaataaccagcatggtagaatgaaacatgttttagagctctaagtt
tttcagggttttttgataaaacacaaaacttactcccaaaagctacttca
agacaaagttctcacagccctactcctagctcatgcacctgtctcctttt
cctgcatccaggattcattgctcatcaacacctacagtctcaggtcattg
cagtggaggcagatgatggttactgcttatgctgctccagtctttataaa
ctgcctcagtgcaggcacacttcctggcttagtcactgctaaaatgctgg
atcctaaatctatgctccaaaaaatgattggtgaatggatgttacttcca
agaagcagtttgaaacccaggctggtgctctggggagtcactatttaact
tgaaactgaagataaaagagtcccattttctttctttttttccttccttc
cttccttccttccttcctt
gaattcctgatctttccaagacgtttgtcatgaatgggtgttggattttg
tcaaatgctttctccgcatctaaagagatgatcatgtgttttttgtcttt
gagtttgtttatatactggaatacattgatggatttccatatattgaacc
atccctgcatcccagggatgaaacctacttggtcaggatgaatgattgtt
ttgatgtgttctcagattctattagcaagaacattattgaggatttttgc
attgatattcataaggaaaattggtctgaagttctctatctttgttgggt
ctttttgtagtttaggtatcagagtaattgtggcttcatagaatgagttg
ggtaccttctgtttctatttttatggaatagtttgagaagaactgggatt
agaacttgtttgaaggtttgatagaactctgcactaaacccatctggtcc
tgggcttttttttgtttgggaggccactaatgactgcttcaatttcttta
ggggatgtaggactgtttagatcattaacctgatcttgatttaactttgg
tacctggtatctgtctagaaacttgtttatttcatccaggtttccagttg
agcagagccttttgtagaagatctgatggtgttttggatttcttcaggat
ctgttgtgatgtctccctttacatttctgattttgttaattaggatgctt
ttcctgtgccctctagtgagtctggctaagggtttatctatcttgttgat
tttctcaaagaaccaactcctcttttggttgattctttgaatagttcatg
tttctacatggtgatttcagcaatgcgtttgattatttcctactgtctac
tcctcttgggtgattttgcttctttgttctaggacttttagtgtgttgtc
aggatgctagtgtatgctctctctagtttcttttggaagcctcagagctt
gagttttctcttagggatgcttcatggggctcatagtttgactagtttgt
actctttttttaaacttaaaagctttttctttg
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr1_3087084_3087802
seq2: B6Ng01-026M10.b_48_766 (reverse)

seq1  AAGGAAGGAAGGAAGGAAGGAAGGAAGGAAAAAAAGAAAGAAAATGGGAC  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGGAAGGAAGGAAGGAAGGAAGGAAGGAAAAAAAGAAAGAAAATGGGAC  50

seq1  TCTTTTATCTTCAGTTTCAAGTTAAATAGTGACTCCCCAGAGCACCAGCC  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTTTTATCTTCAGTTTCAAGTTAAATAGTGACTCCCCAGAGCACCAGCC  100

seq1  TGGGTTTCAAACTGCTTCTTGGAAGTAACATCCATTCACCAATCATTTTT  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGGTTTCAAACTGCTTCTTGGAAGTAACATCCATTCACCAATCATTTTT  150

seq1  TGGAGCATAGATTTAGGATCCAGCATTTTAGCAGTGACTAAGCCAGGAAG  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGAGCATAGATTTAGGATCCAGCATTTTAGCAGTGACTAAGCCAGGAAG  200

seq1  TGTGCCTGCACTGAGGCAGTTTATAAAGACTGGAGCAGCATAAGCAGTAA  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTGCCTGCACTGAGGCAGTTTATAAAGACTGGAGCAGCATAAGCAGTAA  250

seq1  CCATCATCTGCCTCCACTGCAATGACCTGAGACTGTAGGTGTTGATGAGC  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCATCATCTGCCTCCACTGCAATGACCTGAGACTGTAGGTGTTGATGAGC  300

seq1  AATGAATCCTGGATGCAGGAAAAGGAGACAGGTGCATGAGCTAGGAGTAG  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATGAATCCTGGATGCAGGAAAAGGAGACAGGTGCATGAGCTAGGAGTAG  350

seq1  GGCTGTGAGAACTTTGTCTTGAAGTAGCTTTTGGGAGTAAGTTTTGTGTT  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGCTGTGAGAACTTTGTCTTGAAGTAGCTTTTGGGAGTAAGTTTTGTGTT  400

seq1  TTATCAAAAAACCCTGAAAAACTTAGAGCTCTAAAACATGTTTCATTCTA  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTATCAAAAAACCCTGAAAAACTTAGAGCTCTAAAACATGTTTCATTCTA  450

seq1  CCATGCTGGTTATTGTTTTTGTTGTCTTTTTGTTGTTGTTGTTGTTTTGT  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCATGCTGGTTATTGTTTTTGTTGTCTTTTTGTTGTTGTTGTTGTTTTGT  500

seq1  TTTTGTTTTGTCAAGTTGACACAAACTAGACACCTGGGAAGAGAGACTCT  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTTGTTTTGTCAAGTTGACACAAACTAGACACCTGGGAAGAGAGACTCT  550

seq1  CAATTGATAAGATGCCCCCATCAGATCAGCTTGCAGGCAAGCCTTTGGAT  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAATTGATAAGATGCCCCCATCAGATCAGCTTGCAGGCAAGCCTTTGGAT  600

seq1  TATTGAAGTGGGAAGGCCCAGACTACTGTAGGCAATACCACTTCCTGGTG  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATTGAAGTGGGAAGGCCCAGACTACTGTAGGCAATACCACTTCCTGGTG  650

seq1  AAGTGGTCATGAATGGCATAAGAAAGCAGTCTGAACAAGCCATGGGAAAC  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGTGGTCATGAATGGCATAAGAAAGCAGTCTGAACAAGCCATGGGAAAC  700

seq1  AAACCAATCAGAAGAATTC  719
      |||||||||||||||||||
seq2  AAACCAATCAGAAGAATTC  719