BAC Information

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BAC

Clone NameB6Ng01-026N18
Chromosome1 (Build37)
Map Location 106,428,619 - 106,429,735
singlet/doubletsinglet
Overlap genenone
Upstream geneLOC383546
Downstream geneLOC100041134, Cdh20, Rnf152, LOC100041985, Pign
LinkOpen Mouse BAC browser

no map image available.



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-026N18.bB6Ng01-026N18.g
ACCDH857768DH857769
length1,112449
definitionDH857768|Mus musculus domesticus DNA, BAC clone: B6Ng01-026N18, 5' end.DH857769|Mus musculus domesticus DNA, BAC clone: B6Ng01-026N18, 3' end.
singlet/doubletsinglet---
BLAST hituniqueno hit data
sequence
gaattccttatcactcctctctttattctactccaccttcaatggtttga
atgatgccttccaacatggaagagaatattttttccttctctttttcttc
ttttcttttcttttttttcttctcttttgtctaaattcacaaattcaaat
gctagtcttgaggctgtagcttatatgtcagtgggtagaatatttaccta
ctatgccagaggccctgagatcaatgctcatactaattagtgtgttgcta
cccacaggtctataatcccagcagttccattgaggaagccatatgatgaa
aagcacaattggcacataattaacagccttggccacttcctgaccaatct
gaatattcaaccttgttacaaatcaataacaaaaataagtgacatcaaat
gctactctcattccagaacatactctaaaaaaaataatgattaatctgtg
tgtccaatgtcagacaagatgacatgtgaaattaaacttcacaataccta
agagtgaagtgaaagactggaggcagagatcttcgcaactcaggtattcc
tttcaggttgataaaatgaatgacgttgtcttgatcatgtgtagtttctc
cagctcctcctgtttcctataatgtttgttgcacatacatcatcaatttc
tccatatctgcatcaagtattgatatgccaatgtacacctagttcatcaa
acccatttttcataattgaccctgtaacaattaatttagtatgtattgtg
tgctagtgtgtgaatcagtatcagcaactgagacacagtcactgctccaa
acgaatttacaaccagcatcttagtgtgaatcctgtctctgtgctacttt
ccccagaacattcagaatgaagccttgcctgccttttatataccaggtac
tactgattagaacccagtgacggtttaaggaatacatgtctacctggtgt
ctctcaaatatcttcctacatccctgcttctcactcctgttcactcttat
atactagacacgacctcaggttagatactgatgaccctagtgttttctac
ttgaaagagaagaaaagtaaattgattgtcagttgcagtctgcctaattc
aatgagaaacca

taggaattctttaacttctttccttatttcttccccgatccagagatcat
tgagtagagagttgttcaatctctaggattgtgtagggtttgtggtatat
atgttgttgttaaagtccatctttaattcataatggcatgataagatatt
tcaattttcttatatctgttgaggctttctttgggacaggctacatgatt
aattttgtagaaggaactatgaggtgttgggaagaatatatattcttttg
tgtttgagtgaaatattctacaaatgtctgttaggtccttttgattcata
atgtcttttagtttcattacttctctgtttagtttttgtctggataacct
gttagttggtgagagtggggcgttgaagtcttacactatgaatatgtgga
gtcgatgtcaaatttaagctttagcaatgtttcttttacaaatgaggat
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr1_106428619_106429735
seq2: B6Ng01-026N18.b_45_1156

seq1  GAATTCCTTATCACTCCTCTCTTTATTCTACTCCACCTTCAATGGTTTGA  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCCTTATCACTCCTCTCTTTATTCTACTCCACCTTCAATGGTTTGA  50

seq1  ATGATGCCTTCCAACATGGAAGAGAATATTTTTTCCTTCTCTTTTTCTTC  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGATGCCTTCCAACATGGAAGAGAATATTTTTTCCTTCTCTTTTTCTTC  100

seq1  TTTTCTTTTCTTTTTTTTCTTCTCTTTTGTCTAAATTCACAAATTCAAAT  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTTCTTTTCTTTTTTTTCTTCTCTTTTGTCTAAATTCACAAATTCAAAT  150

seq1  GCTAGTCTTGAGGCTGTAGCTTATATGTCAGTGGGTAGAATATTTACCTA  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCTAGTCTTGAGGCTGTAGCTTATATGTCAGTGGGTAGAATATTTACCTA  200

seq1  CTATGCCAGAGGCCCTGAGATCAATGCTCATACTAATTAGTGTGTTGCTA  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTATGCCAGAGGCCCTGAGATCAATGCTCATACTAATTAGTGTGTTGCTA  250

seq1  CCCACAGGTCTATAATCCCAGCAGTTCCATTGAGGAAGCCATATGATGAA  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCCACAGGTCTATAATCCCAGCAGTTCCATTGAGGAAGCCATATGATGAA  300

seq1  AAGCACAATTGGCACATAATTAACAGCCTTGGCCACTTCCTGACCAATCT  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGCACAATTGGCACATAATTAACAGCCTTGGCCACTTCCTGACCAATCT  350

seq1  GAATATTCAACCTTGTTACAAATCAATAACAAAAATAAGTGACATCAAAT  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATATTCAACCTTGTTACAAATCAATAACAAAAATAAGTGACATCAAAT  400

seq1  GCTACTCTCATTCCAGAACATACTCTAAAAAAAATAATGATTAATCTGTG  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCTACTCTCATTCCAGAACATACTCTAAAAAAAATAATGATTAATCTGTG  450

seq1  TGTCCAATGTCAGACAAGATGACATGTGAAATTAAACTTCACAATACCTA  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTCCAATGTCAGACAAGATGACATGTGAAATTAAACTTCACAATACCTA  500

seq1  AGAGTGAAGTGAAAGACTGGAGGCAGAGATCTTCGCAACTCAGGTATTCC  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGAGTGAAGTGAAAGACTGGAGGCAGAGATCTTCGCAACTCAGGTATTCC  550

seq1  TTTCAGGTTGATAAAATGAATGACGTTGTCTTGATCATGTGTAGTTTCTC  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTCAGGTTGATAAAATGAATGACGTTGTCTTGATCATGTGTAGTTTCTC  600

seq1  CAGCTCCTCCTGTTTCCTATAATGTTTGTTGCACATACATCATCAATTTC  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGCTCCTCCTGTTTCCTATAATGTTTGTTGCACATACATCATCAATTTC  650

seq1  TCCATATCTGCATCAAGTATTGATATGCCAATGTACACCTAGTTCATCAA  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCCATATCTGCATCAAGTATTGATATGCCAATGTACACCTAGTTCATCAA  700

seq1  ACCCATTTTTCATAATTGACCCTGTAACAATTAATTTAGTATGTATTGTG  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACCCATTTTTCATAATTGACCCTGTAACAATTAATTTAGTATGTATTGTG  750

seq1  TGCTAGTGTGTGAATCAGTATCAGCAACTGAGACACAGTCACTGCTCCAA  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGCTAGTGTGTGAATCAGTATCAGCAACTGAGACACAGTCACTGCTCCAA  800

seq1  ACGAATTTACAACCAGCATCTTAGTGTGAATCCTGTCTCTGTGCTACTTT  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACGAATTTACAACCAGCATCTTAGTGTGAATCCTGTCTCTGTGCTACTTT  850

seq1  CCCCAGAACATTCAGAATGAAGCCTTGCCTGCCTTTTATATACCAGGTAC  900
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCCCAGAACATTCAGAATGAAGCCTTGCCTGCCTTTTATATACCAGGTAC  900

seq1  TACTGATTAGAACCCAGTGACGGTTTAAGGAATAACATGTCTACCTGGTG  950
      ||||||||||||||||||||||||||||||||| ||||||||||||||||
seq2  TACTGATTAGAACCCAGTGACGGTTTAAGGAAT-ACATGTCTACCTGGTG  949

seq1  TCTCTCAAATATCTTCCTACATCCCTGCTTCTCACTCCTGTTCACTCTTA  1000
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTCTCAAATATCTTCCTACATCCCTGCTTCTCACTCCTGTTCACTCTTA  999

seq1  TATTACTAGACACGACCTCAGGTTAGATACTGATGACCCTAGTGTTTTCT  1050
      || |||||||||||||||||||||||||||||||||||||||||||||||
seq2  TA-TACTAGACACGACCTCAGGTTAGATACTGATGACCCTAGTGTTTTCT  1048

seq1  AACTTGATAGAGAAGAAAAGTAAATTGATTGTCAAGTTGCAGTGCTG-CT  1099
       |||||| ||||||||||||||||||||||||| ||||||||| ||| ||
seq2  -ACTTGAAAGAGAAGAAAAGTAAATTGATTGTC-AGTTGCAGT-CTGCCT  1095

seq1  AATTCAATGAAGAAACCA  1117
      ||||||||| ||||||||
seq2  AATTCAATG-AGAAACCA  1112


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