BAC Information

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BAC

Clone NameB6Ng01-027A12
Chromosome1 (Build37)
Map Location 144,757,550 - 144,917,087
singlet/doubletdoublet
Overlap genenone
Upstream geneLOC639376
Downstream geneLOC545369, Cdc73, B3galt2, LOC623138, Glrx2, Trove2, Uchl5, Rgs2
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-027A12.bB6Ng01-027A12.g
ACCDH857891DH857892
length914719
definitionDH857891|Mus musculus domesticus DNA, BAC clone: B6Ng01-027A12, 5' end.DH857892|Mus musculus domesticus DNA, BAC clone: B6Ng01-027A12, 3' end.
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(144,916,165 - 144,917,087)(144,757,550 - 144,758,268)
sequence
gaattcaacttacttttccttttatcatcaatataagatcataattcttc
attgaccattgcttaattgattaataaaattaaatgcattcgtacagttc
ttctgatccacttgtaagtggattgactactgactattctgctagcatca
ccacggattactggttgaaatgtatggctgaaaaattactactctaaccc
tgtttcatttcaagtggaaaagtgctgtactggacagtcaacgatggaat
gatggagactgtctagaaactgaactgaaagtcaactaatcaatcaccaa
tttagggctgtcataatgactgcattacctgagtgaactagagtgtcgtg
aaattgagcttgcttatatggactgtctgacctctgtgtcatcacttgta
caacagtctgattgattactctgtgactggcctaaactatctggaaaatg
atcaattttctgtcatgtctaatcctgtccatattataatgcaggcaatt
gctttgactgcattatgtgtaggtctccatcactggtgaacaaggtcact
gtaattggagatacttgtattcttctcatcatacagataaggaggattta
gattttaacattgccttgaaaatgaatcatttaattaatcagagtatcca
tagtttaagtggttgtacttctctcaagtgctcaaagaacctgcttgtat
tatttcagcacattcattgctggctttttaaattgtagttttaaaatata
ctatgtcctttgccacctgcataaacttgaatcttctctcttatttttga
actatagtctaggtaataagcattatatttaaaaagtaaatgttgctgca
aataagactatatgtgacaaaaaaactgcgtggatgtatatatttccaag
ctccaaaaactctg
gaattcattaccaaaaatgattgccatgaaattaagtacattttactgag
caccttaaacccaaaaactgagaaatatacagaggactgccagagaggca
taacaaaaattaatttgtagataatgggtgacttataattaagattatat
taaatatgtatatgatgagtaaaaatatgtatacaaatatttattaaaaa
tgtattctgtatttatgtataatggaattttaattgagcattaaagaaaa
attaaattgtggcatttgtaggaaaatgggatagaattagagatcattag
gtatagcaagacaggcctggttcctttcatatgtagaatcttaatttaaa
tatatatgcatgcatatatacatatacatgttcatttcatattcatatac
atgaagaacattctttctttctttctttctttctttctttctttctttct
ttctttctttctttcttttttttttttttggcttttttgagacaaggttt
ctctgtataaccctggctgttctggaactcactttgtagaccagcttcaa
acccagaaatctgcctgcctctgcctcccaagtgctgggattaaaggcat
gtgctaccactgcctggctatgaagaacattctttgagaagacaaaaagg
aaaagagaaatgggaagtaggagaagaataagaacagaatgtgtgtgtgt
gtgtgtgtgtgtgtgtgtg
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr1_144916165_144917087
seq2: B6Ng01-027A12.b_41_954 (reverse)

seq1  CAGAGTTATTTTGGAGCTTGAAAATATATCACATACCACGCAGTTCTCTT  50
      ||||||  |||||||||||| |||||||| |||| |||||||||| | ||
seq2  CAGAGT--TTTTGGAGCTTGGAAATATAT-ACAT-CCACGCAGTT-TTTT  45

seq1  TGTCACATATACTTCTTATTTGCAGCAACATTTACTTTTTAAATATTAAT  100
      |||||||||||  |||||||||||||||||||||||||||||||| ||||
seq2  TGTCACATATA-GTCTTATTTGCAGCAACATTTACTTTTTAAATA-TAAT  93

seq1  GCTTATTACCTAGACTATAGTTCAAAAATAAGAGAGAAGATTCAAGTTTA  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCTTATTACCTAGACTATAGTTCAAAAATAAGAGAGAAGATTCAAGTTTA  143

seq1  TGCAGGTGGCAAAGGACATAGTATATTTTAAAACTACAATTTAAAAAGCC  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGCAGGTGGCAAAGGACATAGTATATTTTAAAACTACAATTTAAAAAGCC  193

seq1  AGCAATGAATGTGCTGAAATAATACAAGCAGGTTCTTTGAGCACTTGAGA  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGCAATGAATGTGCTGAAATAATACAAGCAGGTTCTTTGAGCACTTGAGA  243

seq1  GAAGTACAACCACTTAAACTATGGATACTCTGATTAATTAAATGATTCAT  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAAGTACAACCACTTAAACTATGGATACTCTGATTAATTAAATGATTCAT  293

seq1  TTTCAAGGCAATGTTAAAATCTAAATCCTCCTTATCTGTATGATGAGAAG  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTCAAGGCAATGTTAAAATCTAAATCCTCCTTATCTGTATGATGAGAAG  343

seq1  AATACAAGTATCTCCAATTACAGTGACCTTGTTCACCAGTGATGGAGACC  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATACAAGTATCTCCAATTACAGTGACCTTGTTCACCAGTGATGGAGACC  393

seq1  TACACATAATGCAGTCAAAGCAATTGCCTGCATTATAATATGGACAGGAT  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TACACATAATGCAGTCAAAGCAATTGCCTGCATTATAATATGGACAGGAT  443

seq1  TAGACATGACAGAAAATTGATCATTTTCCAGATAGTTTAGGCCAGTCACA  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAGACATGACAGAAAATTGATCATTTTCCAGATAGTTTAGGCCAGTCACA  493

seq1  GAGTAATCAATCAGACTGTTGTACAAGTGATGACACAGAGGTCAGACAGT  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGTAATCAATCAGACTGTTGTACAAGTGATGACACAGAGGTCAGACAGT  543

seq1  CCATATAAGCAAGCTCAATTTCACGACACTCTAGTTCACTCAGGTAATGC  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCATATAAGCAAGCTCAATTTCACGACACTCTAGTTCACTCAGGTAATGC  593

seq1  AGTCATTATGACAGCCCTAAATTGGTGATTGATTAGTTGACTTTCAGTTC  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTCATTATGACAGCCCTAAATTGGTGATTGATTAGTTGACTTTCAGTTC  643

seq1  AGTTTCTAGACAGTCTCCATCATTCCACTGTTGACTGTCCAGTACAGCAC  700
      |||||||||||||||||||||||||||  |||||||||||||||||||||
seq2  AGTTTCTAGACAGTCTCCATCATTCCATCGTTGACTGTCCAGTACAGCAC  693

seq1  TTTTCCACTTGAAATGAAACAGGGTTAGAGTAGTAATTTTTCAGCCATAC  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTTCCACTTGAAATGAAACAGGGTTAGAGTAGTAATTTTTCAGCCATAC  743

seq1  ATTTCAACCACTAATCCGTGGTGATGCTAGCAGAATAGTCAGTAGTCAAT  800
      |||||||||| |||||||||||||||||||||||||||||||||||||||
seq2  ATTTCAACCAGTAATCCGTGGTGATGCTAGCAGAATAGTCAGTAGTCAAT  793

seq1  CCACTTACAAGTGGAACAGAAGAACTGTACGAATGCATTTAATTTTCTTA  850
      ||||||||||||||| |||||||||||||||||||||||||||||| |||
seq2  CCACTTACAAGTGGATCAGAAGAACTGTACGAATGCATTTAATTTTATTA  843

seq1  ATCAATTAAGCAATGGTCAATGAAGAATTATGATCTTATATTGATTGATA  900
      |||||||||||||||||||||||||||||||||||||||||||| |||||
seq2  ATCAATTAAGCAATGGTCAATGAAGAATTATGATCTTATATTGA-TGATA  892

seq1  AAAGTGAAAAGTAAGTTGAATTC  923
      |||| ||||||||||||||||||
seq2  AAAG-GAAAAGTAAGTTGAATTC  914

seq1: chr1_144757550_144758268
seq2: B6Ng01-027A12.g_66_784

seq1  GAATTCAGTACCAAAAATGATTGCCATGAAATTAAGTACATTTTACTGAG  50
      ||||||| ||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCATTACCAAAAATGATTGCCATGAAATTAAGTACATTTTACTGAG  50

seq1  CACCTTAAACCCAAAAACTGAGAAATATACAGAGGACTGCCAGAGAGGCA  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CACCTTAAACCCAAAAACTGAGAAATATACAGAGGACTGCCAGAGAGGCA  100

seq1  TAACAAAAATTAATTTGTAGATAATGGGTGACTTATAATTAAGATTATAT  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAACAAAAATTAATTTGTAGATAATGGGTGACTTATAATTAAGATTATAT  150

seq1  TAAATATGTATATGATGAGTAAAAATATGTATACAAATATTTATTAAAAA  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAAATATGTATATGATGAGTAAAAATATGTATACAAATATTTATTAAAAA  200

seq1  TGTATTCTGTATTTATGTATAATGGAATTTTAATTGAGCATTAAAGAAAA  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTATTCTGTATTTATGTATAATGGAATTTTAATTGAGCATTAAAGAAAA  250

seq1  ATTAAATTGTGGCATTTGTAGGAAAATGGGATAGAATTAGAGATCATTAG  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTAAATTGTGGCATTTGTAGGAAAATGGGATAGAATTAGAGATCATTAG  300

seq1  GTATAGCAAGACAGGCCTGGTTCCTTTCATATGTAGAATCTTAATTTAAA  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTATAGCAAGACAGGCCTGGTTCCTTTCATATGTAGAATCTTAATTTAAA  350

seq1  TATATATGCATGCATATATACATATACATGTTCATTTCATATTCATATAC  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATATATGCATGCATATATACATATACATGTTCATTTCATATTCATATAC  400

seq1  ATGAAGAACATTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCT  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGAAGAACATTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCT  450

seq1  TTCTTTCTTTCTTTCTTTTTTTTTTTTTTGGCTTTTTTGAGACAAGGTTT  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCTTTCTTTCTTTCTTTTTTTTTTTTTTGGCTTTTTTGAGACAAGGTTT  500

seq1  CTCTGTATAACCCTGGCTGTTCTGGAACTCACTTTGTAGACCAGCTTCAA  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCTGTATAACCCTGGCTGTTCTGGAACTCACTTTGTAGACCAGCTTCAA  550

seq1  ACCCAGAAATCTGCCTGCCTCTGCCTCCCAAGTGCTGGGATTAAAGGCAT  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACCCAGAAATCTGCCTGCCTCTGCCTCCCAAGTGCTGGGATTAAAGGCAT  600

seq1  GTGCTACCACTGCCTGGCTATGAAGAACATTCTTTGAGAAGACAAAAAGG  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTGCTACCACTGCCTGGCTATGAAGAACATTCTTTGAGAAGACAAAAAGG  650

seq1  AAAAGAGAAATGGGAAGTAGGAGAAGAATAAGAACAGAATGTGTGTGTGT  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAAGAGAAATGGGAAGTAGGAGAAGAATAAGAACAGAATGTGTGTGTGT  700

seq1  GTGTGTGTGTGTGTGTGTG  719
      |||||||||||||||||||
seq2  GTGTGTGTGTGTGTGTGTG  719