BAC Information

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BAC

Clone NameB6Ng01-028C19
Chromosome1 (Build37)
Map Location 109,947,832 - 109,948,941
singlet/doubletsinglet
Overlap genenone
Upstream geneSerpinb3a, Serpinb3d, LOC100041276, Serpinb3b, EG666401, Serpinb3c, LOC666414, Serpinb11, Serpinb7, Serpinb2, Serpinb10, Serpinb8
Downstream geneLOC435640, EG626474
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-028C19.bB6Ng01-028C19.g
ACCDH858722DH858723
length1,1071,187
definitionDH858722|Mus musculus domesticus DNA, BAC clone: B6Ng01-028C19, 5' end.DH858723|Mus musculus domesticus DNA, BAC clone: B6Ng01-028C19, 3' end.
singlet/doubletsinglet---
BLAST hituniqueno hit data
sequence
gaattccaatggaattttttgggcccccattcaaggggatttccataata
ctgtgttatttctcaagtccttggttcaacatgaagacttctctagacaa
tgaagtggaatcacgacttttctctcactaagttttatacagaactccta
actttatacaagagtgctttcttctctaagagccaactcttccagttgac
agtgactttctgagggaaaagcaatgaagaacaggagataacttgggcat
cagtagaacagaattggctaaggataaccagagtgagaagtttagatagg
ttttcccttacatgcatcataggatatgaggctaaactcactttgatttg
accacataattgttaccaaaggatcatgggactggcctgtcagagcttaa
taatttttaatatgaccttttaataaattatagttattgcctagctttta
tttttattaatattatttgtgtttgataaaacataattataaatatttat
gtattacagtatgctatcttgatacaatatacaatgtagaatgattatag
ctaaatatataatattagaaatctattatcattcttagagatcaatttta
ttttgagacatttgaaattatgaattaaattaattgtataaattaaatat
taatactggcctgaggagatggcccagtgggtaatgtgtttgtcttggaa
gcatgagaattgggtttcatctttccaagaaactacatgcaaattgtggg
taggtatgactatccactagtaatttaagcactcttatggtagacatagc
ttccccagagtaagctgtctagataatctagcccaatctagaaacttgtg
gttcagttgtaagactttgcctcagttaataaggttctgagccttagagg
aagatacataatatcaacttatatttccacaggcatattgtgatgtattg
accagagaaatttacccagatatgcattaagagcacacagttttattagc
tgactggccactatactggtgatcaggatcccagtgttagccctgaacct
tcctcatgtgagcttctattcacaaaaaacatgttctgagctgacataca
ttattaa
gaattccagagagaggtaggtgacctttatcttaatttactgactatatt
tatggacattccaaagctctttctgtggggtggaaggctggaaactattg
ctggggaagcctggaaactctaactgttactggcccactgcccttgcctc
aggcaaggttgtgagtcagtttctgattgactgctttaggcccagggttt
ttccagtaactgatttgcctgaacttgcccagttcttggaagcagagatc
tagaccttgtctcctaaactgccaatttgaaacatgtcatggagtcagcc
tctctcggtcctctcaccatatttctcctaggtacagctgttcttggcat
atgtatgtcatataaattgctttccactttaggtggacctcgatgtcatt
gaaggctctcctaaacctgtagaaaagatgcctaggttatcattgtctca
tttcagtagtgaaaatgttttgcagatgtctgacaggataacaaagcaag
acctaagaccaccatctcatgaaaaacattgagtccatgaaggtaagcag
gggtgaagtaacctgaaggcccgctgttgacagtttccagtgaatgcaaa
ctgttcttagtagacagcacctaaggaaatatttaaaaattaattattaa
agtcaaattaagactggatatagaacaccccttgcattagttgttcaatg
aagagcaatgctggacacaacatagatggggcaaagtgtcttctgtagct
ctctataatgcatgatttttctttagaagcagcctgacttcttcaaaagc
catactgggctatgacaggctatggctgggtaaaaagaaaaaaaatctct
accttttaaaactctaatgacttttgtaatttcatcatagtcataagcag
tctataccctgggacccccaccagtctactagagtaatacatcacatgta
ctcatttcacatgataggcttaacattctggctctcagtcaaacaatatc
actaccatttatttttatggattgatgagactattttctgcttactccat
ttcatctccctgaggcttgaaactgcttctatcgggatctaggcttttga
gcctattagtatcataggctagctctagaggaagtcttattcgaatgatg
tggaagctatgcatctgcgattgtcggaagagaaatg
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr1_109947832_109948941
seq2: B6Ng01-028C19.b_43_1149

seq1  GAATTCCAATGGAATTTTTTGGGCCCCCATTCAAGGGGATTTCCATAATA  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCCAATGGAATTTTTTGGGCCCCCATTCAAGGGGATTTCCATAATA  50

seq1  CTGTGTTATTTCTCAAGTCCTTGGTTCAACATGAAGACTTCTCTAGACAA  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGTGTTATTTCTCAAGTCCTTGGTTCAACATGAAGACTTCTCTAGACAA  100

seq1  TGAAGTGGAATCACGACTTTTCTCTCACTAAGTTTTATACAGAACTCCTA  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGAAGTGGAATCACGACTTTTCTCTCACTAAGTTTTATACAGAACTCCTA  150

seq1  ACTTTATACAAGAGTGCTTTCTTCTCTAAGAGCCAACTCTTCCAGTTGAC  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTTTATACAAGAGTGCTTTCTTCTCTAAGAGCCAACTCTTCCAGTTGAC  200

seq1  AGTGACTTTCTGAGGGAAAAGCAATGAAGAACAGGAGATAACTTGGGCAT  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTGACTTTCTGAGGGAAAAGCAATGAAGAACAGGAGATAACTTGGGCAT  250

seq1  CAGTAGAACAGAATTGGCTAAGGATAACCAGAGTGAGAAGTTTAGATAGG  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGTAGAACAGAATTGGCTAAGGATAACCAGAGTGAGAAGTTTAGATAGG  300

seq1  TTTTCCCTTACATGCATCATAGGATATGAGGCTAAACTCACTTTGATTTG  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTTCCCTTACATGCATCATAGGATATGAGGCTAAACTCACTTTGATTTG  350

seq1  ACCACATAATTGTTACCAAAGGATCATGGGACTGGCCTGTCAGAGCTTAA  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACCACATAATTGTTACCAAAGGATCATGGGACTGGCCTGTCAGAGCTTAA  400

seq1  TAATTTTTAATATGACCTTTTAATAAATTATAGTTATTGCCTAGCTTTTA  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAATTTTTAATATGACCTTTTAATAAATTATAGTTATTGCCTAGCTTTTA  450

seq1  TTTTTATTAATATTATTTGTGTTTGATAAAACATAATTATAAATATTTAT  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTTTATTAATATTATTTGTGTTTGATAAAACATAATTATAAATATTTAT  500

seq1  GTATTACAGTATGCTATCTTGATACAATATACAATGTAGAATGATTATAG  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTATTACAGTATGCTATCTTGATACAATATACAATGTAGAATGATTATAG  550

seq1  CTAAATATATAATATTAGAAATCTATTATCATTCTTAGAGATCAATTTTA  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTAAATATATAATATTAGAAATCTATTATCATTCTTAGAGATCAATTTTA  600

seq1  TTTTGAGACATTTGAAATTATGAATTAAATTAATTGTATAAATTAAATAT  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTTGAGACATTTGAAATTATGAATTAAATTAATTGTATAAATTAAATAT  650

seq1  TAATACTGGCCTGAGGAGATGGCCCAGTGGGTAATGTGTTTGTCTTGGAA  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAATACTGGCCTGAGGAGATGGCCCAGTGGGTAATGTGTTTGTCTTGGAA  700

seq1  GCATGAGAATTGGGTTTCATCTTTCCAAGAAACTACATGCAAATTGTGGG  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCATGAGAATTGGGTTTCATCTTTCCAAGAAACTACATGCAAATTGTGGG  750

seq1  TAGGTATGACTATCCACTAGTAATTTAAGCACTCTTATGGTAGACATAGC  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAGGTATGACTATCCACTAGTAATTTAAGCACTCTTATGGTAGACATAGC  800

seq1  TTCCCCAGAGTAAGCTGTCTAGATAATCTAGCCCAATCTAGAAACTTGTG  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCCCCAGAGTAAGCTGTCTAGATAATCTAGCCCAATCTAGAAACTTGTG  850

seq1  GTTCAGTTGTAAGACTTTGCCTCAGTTAATAAGGTTCTGAGCCTTAGAGG  900
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTTCAGTTGTAAGACTTTGCCTCAGTTAATAAGGTTCTGAGCCTTAGAGG  900

seq1  AAGATACATAATATCAACTTATATTTCCACAGGCATATTGTGATGTATTG  950
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGATACATAATATCAACTTATATTTCCACAGGCATATTGTGATGTATTG  950

seq1  ACCAGAGAAATTTACCCAGATATGCAATTAAGAGCACACAGTTTTATTAG  1000
      ||||||||||||||||||||||||| ||||||||||||||||||||||||
seq2  ACCAGAGAAATTTACCCAGATATGC-ATTAAGAGCACACAGTTTTATTAG  999

seq1  CTGACTGGCCACTATACTGGGTGATCAGGATCCCAGTG-TAGCCCTGAAC  1049
      |||||||||||||||||| ||||||||||||||||||| |||||||||||
seq2  CTGACTGGCCACTATACT-GGTGATCAGGATCCCAGTGTTAGCCCTGAAC  1048

seq1  CTTTCTCAATGTGAGCTTCTAATCACAAAAAACATGTTCTGAGCTGACAT  1099
      ||| ||| ||||||||||||| ||||||||||||||||||||||||||||
seq2  CTTCCTC-ATGTGAGCTTCTATTCACAAAAAACATGTTCTGAGCTGACAT  1097

seq1  ACATTAATTAA  1110
      ||||| |||||
seq2  ACATT-ATTAA  1107