BAC Information

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BAC

Clone NameB6Ng01-028G22
Chromosome1 (Build37)19 (Build37)
Map Location 150,303,312 - 150,304,38649,054,159 - 49,054,681
singlet/doubletsingletsinglet
Overlap genenone
Upstream genenone
Downstream geneLOC100042792, LOC435647
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-028G22.bB6Ng01-028G22.g
ACCDH858910DH858911
length1,0711,103
definitionDH858910|Mus musculus domesticus DNA, BAC clone: B6Ng01-028G22, 5' end.DH858911|Mus musculus domesticus DNA, BAC clone: B6Ng01-028G22, 3' end.
singlet/doubletsingletsinglet
BLAST hituniqueunique
Map location.(150,303,312 - 150,304,386)(49,054,159 - 49,054,681)
sequence
gaattccaatcataccactctagtctctttactttaaattgttttattgt
aaattgattcttctttcatacaatctactccaaccattgatttttccctt
cctctactcctccaaatgcctcctaccccttcttttccacttaactgatc
tattagtactgtaacatacagggtccatggccaagcagggcacttggtgg
cagttttttttccaccatatatatggagctttctggtactattaaaccac
tagcatggatgcttctaattcagtaccagcataatttttccatatcccat
tgacaaaatatacaatgtatttagaaatagagaattggtatctagttcta
tcatgaaatcaatattagtaataatgctttttatgatttatactggctta
gatatctgtatgctcaataattcctgggaagttaatccattcttaatatt
ggaatttttatccaactttatgacgtcttgtattattgtatcacacacat
gtataagccttcatatttaaactacttgaagactactattcttttattca
attaattaagtcccagtagagatataatgttattagacgcattctcacgc
ccggccaggaagaacaccacagaccagaatcttctgcggcaaaactttat
tgcttacatcttcaggagcaagagtgtaagaagcaagagagagagaaaac
gaaaccccgtcccttttttaggagagttatatttcgcctaggacgtgtca
ctccctgattggctgcagcccatcggccgagttgacgtcacggggaaggc
agagcacatggagtggagaaccaccctcggcatatgcgcagattatttgt
ttaccacttagaacacagctgtcagcgccatcttgtaacggcgaatgtgg
gcgcggctcccaacatctcccctttccttttataagagcaaataggccac
ccatattaatgagagtggagatagaggtcaaatccccagtgtgtaggtaa
aggagccatgtacaggatagctcttaagctcacaggcttttaccagagca
accctgactgctccgtgtcgt
gaattcctgatctttccaagacttttatcatgaatgggtgttggatcttg
tcaaatgctttctccacatctaaggagatgatcatgtggttttgtctttg
agtttgtttatataatggattacattgatgaatttcggtatattaaacca
tccctgcatccctggagtaaaacctacttggtcaggatggatgattcctt
taatgtgttcttggattcggttagtgagaattttattgagtatttttgca
tcaatattcataagggaaattggtcggaagttctctattatttttggatc
tttctgtggtttaggtatcagagtatgtggcttcatagaatgagttgggt
agagaaccttctacttctattttgtggaatagtttgtgcagaactggaat
tagatctcctttgaaggtctgatagaactctgcactaagcctatctggtc
ctgggcttcttttggctgggacactattaatgactgcttctatttcttta
ggggatgtgggactgtttagatcgttaacttgatcctgatttaactttgg
tacctggtatctgtctagcaatatgtccatttagtccaggttttccagtt
ttgttgagtataaccttttgtagaaggatctgatggtgttttggatttct
tcaggatctgttgttatttctccctttcatttctgattttgttacttagg
atactgtccctgtgccctctagtgagtctagctaatggtttatctatctt
tttgattttctcaaagaaccaactcctcgtttggttaattctttgaatag
ttcttcttgtttccacttggttgatttcgcccttgagtttgattatttcc
tgctgtctactcctcttgggtgaattttcttccttttttcagagcattta
gatgtgttgtcaagctggtagtgtgtgctctctctagtttctttttgaag
cactcagagctatgagtttccctcctaagaatacttttattggtccctta
ggttgggaaagggtgggctcctttacattaaactcaaaagtctttattcc
tttcttatacttcctgaccaggatcattggaagagtgttgttcagtatcc
acg
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr1_150303312_150304386
seq2: B6Ng01-028G22.b_47_1115

seq1  GAATTCCAATCATACCACTCTAGTCTCTTTACTTTAAATTGTTTTATTGT  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCCAATCATACCACTCTAGTCTCTTTACTTTAAATTGTTTTATTGT  50

seq1  AAATTGATTCTTCTTTCATACAATCTACTCCAACCATTGATTTTTCCCTT  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAATTGATTCTTCTTTCATACAATCTACTCCAACCATTGATTTTTCCCTT  100

seq1  CCTCTACTCCTCCAAATGCCTCCTACCCCTTCTTTTCCACTTAACTGATC  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTCTACTCCTCCAAATGCCTCCTACCCCTTCTTTTCCACTTAACTGATC  150

seq1  TATTAGTACTGTAACATACAGGGTCCATGGCCAAGCAGGGCACTTGGTGG  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATTAGTACTGTAACATACAGGGTCCATGGCCAAGCAGGGCACTTGGTGG  200

seq1  CAGTTTTTTTTCCACCATATATATGGAGCTTTCTGGTACTATTAAACCAC  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGTTTTTTTTCCACCATATATATGGAGCTTTCTGGTACTATTAAACCAC  250

seq1  TAGCATGGATGCTTCTAATTCAGTACCAGCATAATTTTTCCATATCCCAT  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAGCATGGATGCTTCTAATTCAGTACCAGCATAATTTTTCCATATCCCAT  300

seq1  TGACAAAATATACAATGTATTTAGAAATAGAGAATTGGTATCTAGTTCTA  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGACAAAATATACAATGTATTTAGAAATAGAGAATTGGTATCTAGTTCTA  350

seq1  TCATGAAATCAATATTAGTAATAATGCTTTTTATGATTTATACTGGCTTA  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCATGAAATCAATATTAGTAATAATGCTTTTTATGATTTATACTGGCTTA  400

seq1  GATATCTGTATGCTCAATAATTCCTGGGAAGTTAATCCATTCTTAATATT  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GATATCTGTATGCTCAATAATTCCTGGGAAGTTAATCCATTCTTAATATT  450

seq1  GGAATTTTTATCCAACTTTATGACGTCTTGTATTATTGTATCACACACAT  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGAATTTTTATCCAACTTTATGACGTCTTGTATTATTGTATCACACACAT  500

seq1  GTATAAGCCTTCATATTTAAACTACTTGAAGACTACTATTCTTTTATTCA  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTATAAGCCTTCATATTTAAACTACTTGAAGACTACTATTCTTTTATTCA  550

seq1  ATTAATTAAGTCCCAGTAGAGATATAATGTTATTAGACGCATTCTCACGC  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTAATTAAGTCCCAGTAGAGATATAATGTTATTAGACGCATTCTCACGC  600

seq1  CCGGCCAGGAAGAACACCACAGACCAGAATCTTCTGCGGCAAAACTTTAT  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCGGCCAGGAAGAACACCACAGACCAGAATCTTCTGCGGCAAAACTTTAT  650

seq1  TGCTTACATCTTCAGGAGCAAGAGTGTAAGAAGCAAGAGAGAGAGAAAAC  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGCTTACATCTTCAGGAGCAAGAGTGTAAGAAGCAAGAGAGAGAGAAAAC  700

seq1  GAAACCCCGTCCCTTTTTTAGGAGAGTTATATTTCGCCTAGGACGTGTCA  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAAACCCCGTCCCTTTTTTAGGAGAGTTATATTTCGCCTAGGACGTGTCA  750

seq1  CTCCCTGATTGGCTGCAGCCCATCGGCCGAGTTGACGTCACGGGGAAGGC  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCCCTGATTGGCTGCAGCCCATCGGCCGAGTTGACGTCACGGGGAAGGC  800

seq1  AGAGCACATGGAGTGGAGAACCACCCTCGGCATATGCGCAGATTATTTGT  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGAGCACATGGAGTGGAGAACCACCCTCGGCATATGCGCAGATTATTTGT  850

seq1  TTACCACTTAGAACACAGCTGTCAGCGCCATCTTGTAACGGCGAATGTGG  900
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTACCACTTAGAACACAGCTGTCAGCGCCATCTTGTAACGGCGAATGTGG  900

seq1  GCGCGGCTCCCAACATCTCCCCCTTTCCTTTTAATAAGAGCAAATAGGCC  950
      |||||||||||||||||| ||||||||||||| |||||||||||||||||
seq2  GCGCGGCTCCCAACATCT-CCCCTTTCCTTTT-ATAAGAGCAAATAGGCC  948

seq1  ACCCATATTAATGAGAGTGGAGATAGAGGTCAAATCCCCAGTGTGTAGGT  1000
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACCCATATTAATGAGAGTGGAGATAGAGGTCAAATCCCCAGTGTGTAGGT  998

seq1  AAAGGAGCCATGTACAGGATTAGCTCTTAGGCTCACAGGCTTTTACCCAG  1050
      ||||||||||||||||||| ||||||||| ||||||||||||||| ||||
seq2  AAAGGAGCCATGTACAGGA-TAGCTCTTAAGCTCACAGGCTTTTA-CCAG  1046

seq1  AGCAACCCTGACCTGCTCCCGTGTC  1075
      ||||||||||| ||||| |||||||
seq2  AGCAACCCTGA-CTGCT-CCGTGTC  1069

seq1: chr19_49054159_49054681
seq2: B6Ng01-028G22.g_662_1168 (reverse)

seq1  CGTGGAAACTGAACAACACTCTTCTCAATGATACCTTGGTCAAGGAAGGA  50
      |||||| ||||||||||||||||| |||||||  | ||||| |||||| |
seq2  CGTGGATACTGAACAACACTCTTC-CAATGAT--CCTGGTC-AGGAAGTA  46

seq1  ATAAAGAAAGAAATTAAAGACTTTTTAGAGTTTAATGAAAATGAAGCCAC  100
         ||||||| || |||||||||||  |||||||||| ||| ||  ||||
seq2  --TAAGAAAGGAA-TAAAGACTTTT--GAGTTTAATGTAAAGGAGCCCAC  91

seq1  AACGTACCCAAACCTTTGGGACACAATGAAAGCATTTCTAAGAGGGAAAC  150
        | |  || |||||  ||||| |||| |||| |||  || |||||||||
seq2  --CCTTTCCCAACCTAAGGGAC-CAATAAAAGTATTCTTAGGAGGGAAAC  138

seq1  TCATAGCTCTGAGTGCCTCCAAGAAGAAACGGGAGACAGCACATACTAGC  200
      ||||||||||||||| || ||| |||||||  |||| |||||| |||| |
seq2  TCATAGCTCTGAGTG-CTTCAAAAAGAAACTAGAGAGAGCACACACTACC  187

seq1  AGCTTGACAACACATCTAAAAGCTCTAGAAAAAAAGGAAGCAAATTCACC  250
      |||||||||||||||||||| |||||   ||||||||||| |||||||||
seq2  AGCTTGACAACACATCTAAATGCTCT--GAAAAAAGGAAGAAAATTCACC  235

seq1  CAAGAGGAGTAGACTGCAGGAAATAATCAAACTCAGGGGTGAAATCAACC  300
      |||||||||||||| |||||||||||||||||||| ||| ||||||||||
seq2  CAAGAGGAGTAGACAGCAGGAAATAATCAAACTCAAGGGCGAAATCAACC  285

seq1  AAGTGGAAACAAGAAGAACTATTCAAAGAATTAACCAAACGAGGAGTTGG  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGTGGAAACAAGAAGAACTATTCAAAGAATTAACCAAACGAGGAGTTGG  335

seq1  TTCTTTGAGAAAATCAACAAGATAGATAAACCCTTAGCTAGACTCACTAA  400
      ||||||||||||||||| |||||||||||||| |||||||||||||||| 
seq2  TTCTTTGAGAAAATCAAAAAGATAGATAAACCATTAGCTAGACTCACTAG  385

seq1  AGGGCACAGGGACAAAATCCTAATTAACAAAATCAGAAATGAAAAGGGAG  450
      ||||||||||||||  ||||||| ||||||||||||||||| ||||||||
seq2  AGGGCACAGGGACAGTATCCTAAGTAACAAAATCAGAAATG-AAAGGGAG  434

seq1  ACATAACAACAGATCCTGAAGAAATCCAAAACACCATCAGATCCTTCTAC  500
      | ||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAATAACAACAGATCCTGAAGAAATCCAAAACACCATCAGATCCTTCTAC  484

seq1  AAAAGGTTATACTCAACAAAACT  523
      |||||||||||||||||||||||
seq2  AAAAGGTTATACTCAACAAAACT  507