BAC Information

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BAC

Clone NameB6Ng01-028H09
Chromosome1 (Build37)
Map Location 125,222,073 - 125,223,190
singlet/doubletsinglet
Overlap genenone
Upstream geneLOC666983
Downstream geneDpp10
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-028H09.bB6Ng01-028H09.g
ACCDH858930DH858931
length1,1471,109
definitionDH858930|Mus musculus domesticus DNA, BAC clone: B6Ng01-028H09, 5' end.DH858931|Mus musculus domesticus DNA, BAC clone: B6Ng01-028H09, 3' end.
singlet/doublet---singlet
BLAST hitno hit dataunique
sequence
gaattctcacctgaggaatactgaatggcagagaagtacctgaaaaaatg
ttcagcatccttaatcatcagggaaatgcaaatcaaaacaaccctgagat
taaacctcacaccagtcagaatggctaagatcaaaaattccggtgacagc
agatgctggcgaggatgtggagaaagaggagcactcctccattgttggag
gtattgcaagcttgtacaaccactctggaaatcagtctggtggttcttca
gaaaattggacagagtactacaggaggatcccacaatacctctcctggac
atatatccagaagatgtcccaactggtaagtaggacacatgctcccctat
gttcatagcatccttatttataatagccagaagctggaaagaacccagat
gcccctcaatagaggaatggatacagaaaatgtggtacatttacacaata
gtactactcaactattaaaaaaatgaatttatgaaattcctagccaaatg
gatggacttggagggcatcatcctgagtgaggaaacacaatcacaaaaga
actcacatgatatgtactcactgataagtggatattagccaagaaactta
gattacccaagacatatgatacaatttgctaaacacgtgaatctcaagaa
gaacgaagaccaaagtgtggatactttgcccttcttagaattgggaacaa
aacacccatggaaggagttacagagacaaagtttggagctgacacaaaag
gatggaccatctagacactgccacacccggggatccagcccataatcagc
cttcaaacactgataccattgcatacactagcaagattttgctgaaagga
ccctgatatagctgtctctttgtgaagctatgcaggtgcctagcaaacaa
agagtggatgctcacagtcagctattggttggatcacaggccccaatgga
ggactagagaaagtactcaagagctagagggtctgcaccctataggtgga
cacaatatgactacagtacccctgagctcgtgtctctagttgcatatgta
tcagagatgactagtcagcatcagtggaataaggcacattgtctgcaaat
tatgtgcctcagtaagggaaacagacaaaatggaactggggggagga
gaattcacagcattcttccttaagttgggttaaactgtggaataaatgat
acctcgtgaagagctatcttttactattctcctgactgttagtaagcaaa
tataaaattcaaaggagcttcaattcctttgtctagttaagtgcttagct
gcttctggaaacttgttcaagttgccaaatctcaggcacctttctgaggg
aaccagaatcagaattatatccaagaccaccaagtaggagggcactgatg
aggcttgttgtctttgctaagatattgaaagaattattaatgccacaggg
aaacaaacaaagggcagcagcatatcaggggctttttttgagagctctag
ctacaaagcagaatggggaattgtttcttataggcatcagagaaatcata
aagtttcacaaccccatcaggtggtcaaactatccctgttccttgcctgt
tgtgtggaggcaatgaaatcactggaaagcaatgtgtgagttggaggatc
cacacttaccagagccctctgaggtcatgaggggtctaaaacccaaggca
tgtcagctctcatggttcctgtcattcttctggaatccagacctcaattt
acactctcagagacatgcgcatgacacggcatctgtctctcccgctagca
gtagggatcctagaaccaaggctgagaatggagagaataggggctaagat
gggcttaacttgaacagtgactgttgttagattgcaacacaagtgatatt
ttttccatacattaaaacttgagaaacatttgcataaataaatctttatc
agaagatgtcacaagagagtttcaaggtaggtgtttctagagcaggtttc
acagataagtgccacagtgagtgctagccagcctcctgtggctttctcac
tccagcttttgcatgttgattggtctgaaatgtcctcatacacagaagct
tatccaataatcatcatatcttcttacacaacagcatctaatatactaac
agagggtactttccttatagcttatatttgtaaggaagatcattttttct
agaattttagcagaattcggattaagacctttggtcaggtttggtgcgtc
tttcatctc
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr1_125222073_125223190
seq2: B6Ng01-028H09.g_67_1175 (reverse)

seq1  GAGATG-AAGACGCAACCAAACCTGAACCAAAGGTTCTAATCAGAATTCT  49
      |||||| ||||||| |||||||||| |||||||||  ||||| |||||||
seq2  GAGATGAAAGACGC-ACCAAACCTG-ACCAAAGGTCTTAATCCGAATTCT  48

seq1  GCTTAAAATTTCTAGGAAAAAATGATCTTCCTTAACAAATTATAGGCTAT  99
      |||  ||| ||||| |||||||||||||||||| ||||| |||| |||||
seq2  GCT--AAAATTCTA-GAAAAAATGATCTTCCTT-ACAAA-TATAAGCTAT  93

seq1  -AGGGAAGTACCCTCTGTTAAGTATATTTAGATGCTGTTGTGTAAGAAGA  148
       ||| |||||||||||||| |||||| |||||||||||||||||||||||
seq2  AAGGAAAGTACCCTCTGTT-AGTATA-TTAGATGCTGTTGTGTAAGAAGA  141

seq1  TATTGATGATTATTGGATAAGCTTCTGTTGTATGAGGACATTTCAAGACC  198
      || |||||||||||||||||||||||| |||||||||||||||| |||||
seq2  TA-TGATGATTATTGGATAAGCTTCTG-TGTATGAGGACATTTC-AGACC  188

seq1  AATCAACATGCAAAAGCTGGAGTGAGAAAGCCACAGGAGGCTGGCTAGCA  248
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATCAACATGCAAAAGCTGGAGTGAGAAAGCCACAGGAGGCTGGCTAGCA  238

seq1  CTCACTGTGGCACTTATCTGTGAAACCTGCTCTAGAAACACCTACCTTG-  297
      ||||||||||||||||||||||||||||||||||||||||||||||||| 
seq2  CTCACTGTGGCACTTATCTGTGAAACCTGCTCTAGAAACACCTACCTTGA  288

seq1  AACTCTCTTGTGACATCTTCTGATAAAGATTTATTTATGCAAATGTTTCT  347
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AACTCTCTTGTGACATCTTCTGATAAAGATTTATTTATGCAAATGTTTCT  338

seq1  CAAGTTTTAATGTATGGAAAAAATATCACTTGTGTTGCAATCTAACAACA  397
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAAGTTTTAATGTATGGAAAAAATATCACTTGTGTTGCAATCTAACAACA  388

seq1  GTCACTGTTCAAGTTAAGCCCATCTTAGCCCCTATTCTCTCCATTCTCAG  447
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTCACTGTTCAAGTTAAGCCCATCTTAGCCCCTATTCTCTCCATTCTCAG  438

seq1  CCTTGGTTCTAGGATCCCTACTGCTAGCGGGAGAGACAGATGCCGTGTCA  497
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTTGGTTCTAGGATCCCTACTGCTAGCGGGAGAGACAGATGCCGTGTCA  488

seq1  TGCGCATGTCTCTGAGAGTGTAAATTGAGGTCTGGATTCCAGAAGAATGA  547
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGCGCATGTCTCTGAGAGTGTAAATTGAGGTCTGGATTCCAGAAGAATGA  538

seq1  CAGGAACCATGAGAGCTGACATGCCTTGGGTTTTAGACCCCTCATGACCT  597
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGGAACCATGAGAGCTGACATGCCTTGGGTTTTAGACCCCTCATGACCT  588

seq1  CAGAGGGCTCTGGTAAGTGTGGATCCTCCAACTCACACATTGCTTTCCAG  647
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGAGGGCTCTGGTAAGTGTGGATCCTCCAACTCACACATTGCTTTCCAG  638

seq1  TGATTTCATTGCCTCCACACAACAGGCAAGGAACAGGGATAGTTTGACCA  697
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGATTTCATTGCCTCCACACAACAGGCAAGGAACAGGGATAGTTTGACCA  688

seq1  CCTGATGGGGTTGTGAAACTTTATGATTTCTCTGATGCCTATAAGAAACA  747
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTGATGGGGTTGTGAAACTTTATGATTTCTCTGATGCCTATAAGAAACA  738

seq1  ATTCCCCATTCTGCTTTGTAGCTAGAGCTCTCAAAAAAAGCCCCTGATAT  797
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTCCCCATTCTGCTTTGTAGCTAGAGCTCTCAAAAAAAGCCCCTGATAT  788

seq1  GCTGCTGCCCTTTGTTTGTTTCCCTGTGGCATTAATAATTCTTTCAATAT  847
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCTGCTGCCCTTTGTTTGTTTCCCTGTGGCATTAATAATTCTTTCAATAT  838

seq1  CTTAGCAAAGACAACAAGCCTCATCAGTGCCCTCCTACTTGGTGGTCTTG  897
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTAGCAAAGACAACAAGCCTCATCAGTGCCCTCCTACTTGGTGGTCTTG  888

seq1  GATATAATTCTGATTCTGGTTCCCTCAGAAAGGTGCCTGAGATTTGGCAA  947
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GATATAATTCTGATTCTGGTTCCCTCAGAAAGGTGCCTGAGATTTGGCAA  938

seq1  CTTGAACAAGTTTCCAGAAGCAGCTAAGCACTTAACTAGACAAAGGAATT  997
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTGAACAAGTTTCCAGAAGCAGCTAAGCACTTAACTAGACAAAGGAATT  988

seq1  GAAGCTCCTTTGAATTTTATATTTGCTTACTAACAGTCAGGAGAATAGTA  1047
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAAGCTCCTTTGAATTTTATATTTGCTTACTAACAGTCAGGAGAATAGTA  1038

seq1  AAAGATAGCTCTTCACGAGGTATCATTTATTCCACAGTTTAACCCAACTT  1097
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAGATAGCTCTTCACGAGGTATCATTTATTCCACAGTTTAACCCAACTT  1088

seq1  AAGGAAGAATGCTGTGAATTC  1118
      |||||||||||||||||||||
seq2  AAGGAAGAATGCTGTGAATTC  1109