BAC Information

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BAC

Clone NameB6Ng01-028K07
Chromosome1 (Build37)
Map Location 100,460,538 - 100,461,572
singlet/doubletsinglet
Overlap genenone
Upstream geneD1Ertd622e, Hisppd1, Zh2c2, Pam, LOC100041823, LOC666153, LOC100040887, Slco6d1, LOC100041868
Downstream geneEG666182
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-028K07.bB6Ng01-028K07.g
ACCDH859067DH859068
length1,0201,063
definitionDH859067|Mus musculus domesticus DNA, BAC clone: B6Ng01-028K07, 5' end.DH859068|Mus musculus domesticus DNA, BAC clone: B6Ng01-028K07, 3' end.
singlet/doubletsinglet---
BLAST hituniqueno hit data
sequence
gaattcttatgttctaagcttctgtaacaatagcctgtcaagctttgagc
actcactggcttttccagctcaatgttacaaataattccctctctaaaaa
caatatggtccagtctctcacagtagtattccatgctcttgtatcagttt
ttgttacagtttactttctgtttctatttaaacactgcagactttaattt
aatttttaaatgcttcttggggaggaaaaagtgtattttactgtatactt
tcagaacactgttcatcattgatgaaagtcggggtgggaattcacagaag
agtctaaagcagaagacatggacaaatgctacttatggcttgctttcagg
cccatatttagccaccttcctttaaaataatcttttttttggaattagta
ttcaaatttagtttgaattaatatactactgtatgcttgtgtgtccacat
gttggaatgacaatgtgttcatggattcctatagaggccagcgataagat
ctactggaaaagtcttgtcctctgatagtcctgagcattctttcctgatg
agctatctctccagctccagttccagcttttttttttttttttttttttt
tttttttttttttttggaccccccggccaaccttcctagaaatgatacca
ccctctacaagctcatcatttttttaaatcacttagtgtcctggggtagt
tttttgtcaacttgacaggagttatcttggaagaagagtttacttgaggg
aatgcctctatcatattttctgaggaagtctgtaaagcatttttcttgat
ttgttaatgagttaagaggggccaacacactgggggcaatgccaccccct
gggaaagtggtccagggtactataagaaaagagactgagcaagtcatgag
gagtaggcagtaagcagttttactgcatggctctgcttcagttctgcttt
cgaatcctgcttcagtctggctagctcctccatgatgattaagaactgaa
gctgaatacttttctctcgg
gaattctcacttgaggaataccgaatggcagagaagcacctgaaaaaatg
ttcaacatccttaatcatcagggaaatgcaaatcaaaacaaccctgagat
tccacctcacaccagtcagaatggctaagatcaaaaattcaggtgacagc
agatgctggcgtggatgtggagaaagaggaacactcctccattgttggtg
ggagtgcaggcttgtacaaccactctggaaatcagtctggcggttcctca
gaaaattggacatagtactaccggaggatccagcaatacctctcctgggc
atatatccagaagatgccccaactggtaagaaggacacatgctccactat
gttcatagcagccttatttataatagccagaagctggaaagaacctagat
gcccctcaacagaggaatggatacagaaaatgtggtacatttacacaatg
gagtactactcagctattaaaaagaatgaatttatgaaattcctagccaa
atggatggacctggagggcatcatcctgagtgaggtaacacattcacaaa
gaaactcacacaatatgtactcactgataagtggatattagccccaaacc
taggatacccaagatataagatataatttgctaaacacatgaaactcaag
aagaatgaaaactgaagtgtggacactatgcccctccttagatttgggaa
caaaacacccatggaagaagttacagagacaaagtttggagctgagatga
aaggatggaccatgtagagactgccatatccagggatccaccccataatc
agcatccaaacgctgacaccttgcatacactagcagaattttattgaaag
gacccagatgtatctgtctctttgagactattgcggggcctagccaacac
agaagtggatgctcacagtcagctattggatgatccatgcccccaatgag
actagagtagtaactaaggagctaaggaactgcaacctttagtggacacc
tatgtctaccgatcccggactcttgatctatcgctattatatcaaagttg
ctattgtacactc
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr1_100460538_100461572
seq2: B6Ng01-028K07.b_46_1063

seq1  GAATTCTTATGTTCTAAGCTTCTGTAACAATAGCCTGTCAAGCTTTGAGC  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCTTATGTTCTAAGCTTCTGTAACAATAGCCTGTCAAGCTTTGAGC  50

seq1  ACTCACTGGCTTTTCCAGCTCAATGTTACAAATAATTCCCTCTCTAAAAA  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTCACTGGCTTTTCCAGCTCAATGTTACAAATAATTCCCTCTCTAAAAA  100

seq1  CAATATGGTCCAGTCTCTCACAGTAGTATTCCATGCTCTTGTATCAGTTT  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAATATGGTCCAGTCTCTCACAGTAGTATTCCATGCTCTTGTATCAGTTT  150

seq1  TTGTTACAGTTTACTTTCTGTTTCTATTTAAACACTGCAGACTTTAATTT  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGTTACAGTTTACTTTCTGTTTCTATTTAAACACTGCAGACTTTAATTT  200

seq1  AATTTTTAAATGCTTCTTGGGGAGGAAAAAGTGTATTTTACTGTATACTT  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATTTTTAAATGCTTCTTGGGGAGGAAAAAGTGTATTTTACTGTATACTT  250

seq1  TCAGAACACTGTTCATCATTGATGAAAGTCGGGGTGGGAATTCACAGAAG  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCAGAACACTGTTCATCATTGATGAAAGTCGGGGTGGGAATTCACAGAAG  300

seq1  AGTCTAAAGCAGAAGACATGGACAAATGCTACTTATGGCTTGCTTTCAGG  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTCTAAAGCAGAAGACATGGACAAATGCTACTTATGGCTTGCTTTCAGG  350

seq1  CCCATATTTAGCCACCTTCCTTTAAAATAATCTTTTTTTTGGAATTAGTA  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCCATATTTAGCCACCTTCCTTTAAAATAATCTTTTTTTTGGAATTAGTA  400

seq1  TTCAAATTTAGTTTGAATTAATATACTACTGTATGCTTGTGTGTCCACAT  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCAAATTTAGTTTGAATTAATATACTACTGTATGCTTGTGTGTCCACAT  450

seq1  GTTGGAATGACAATGTGTTCATGGATTCCTATAGAGGCCAGCGATAAGAT  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTTGGAATGACAATGTGTTCATGGATTCCTATAGAGGCCAGCGATAAGAT  500

seq1  CTACTGGAAAAGTCTTGTCCTCTGATAGTCCTGAGCATTCTTTCCTGATG  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTACTGGAAAAGTCTTGTCCTCTGATAGTCCTGAGCATTCTTTCCTGATG  550

seq1  AGCTATCTCTCCAGCTCCAGTTCCAGCTTTTTTTTTTTTTTTTTTTTTTT  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGCTATCTCTCCAGCTCCAGTTCCAGCTTTTTTTTTTTTTTTTTTTTTTT  600

seq1  TTTTTTTTTTTTTTTGTACACCCAGGCCAACCTTCCTAGAAATGATACCA  650
      |||||||||||||||| || ||| ||||||||||||||||||||||||||
seq2  TTTTTTTTTTTTTTTGGACCCCCCGGCCAACCTTCCTAGAAATGATACCA  650

seq1  CCCTCTACAAGCTCATCATTTTTTTAAATCACTTAGTGTCCTGGGTTAGT  700
      ||||||||||||||||||||||||||||||||||||||||||||| ||||
seq2  CCCTCTACAAGCTCATCATTTTTTTAAATCACTTAGTGTCCTGGGGTAGT  700

seq1  TTTTTGTCAACTTGACAGGAGTTATCTTGGAAGAGGAGTTTACTTGAGGG  750
      |||||||||||||||||||||||||||||||||| |||||||||||||||
seq2  TTTTTGTCAACTTGACAGGAGTTATCTTGGAAGAAGAGTTTACTTGAGGG  750

seq1  AATGCCTCTATCATATTTTCTGAGGCAAGTCTGTAAAGCA-TTTTCTTGA  799
      ||||||||||||||||||||||||| |||||||||||||| |||||||||
seq2  AATGCCTCTATCATATTTTCTGAGG-AAGTCTGTAAAGCATTTTTCTTGA  799

seq1  TTGTTCATTGAGTTAAGAGGGCCCAACACACTGGGGGCAATGCCA-CCCC  848
      ||  | | ||||||||||||| ||||||||||||||||||||||| ||||
seq2  TTTGTTAATGAGTTAAGAGGGGCCAACACACTGGGGGCAATGCCACCCCC  849

seq1  TGGGAAGGTGGTCCAGGGTACTATAAGAAAAGAGACTGAGCAAGCCATGA  898
      |||||| ||||||||||||||||||||||||||||||||||||| |||||
seq2  TGGGAAAGTGGTCCAGGGTACTATAAGAAAAGAGACTGAGCAAGTCATGA  899

seq1  GGAGTAAGGCAGTAAGCAGTTTTACTGCATGGCCTCTGCTTCAGTTTCTG  948
      ||||| |||||||||||||||||||||||||| ||||||||||| |||||
seq2  GGAGT-AGGCAGTAAGCAGTTTTACTGCATGG-CTCTGCTTCAG-TTCTG  946

seq1  CTTTCAGATTCCTGCCTTCAGTTCCTGGCCTAGCTTCTCTCCATGATGGA  998
      ||||| || ||||| |||||||  |||| ||||||   ||||||||||  
seq2  CTTTC-GAATCCTG-CTTCAGT--CTGG-CTAGCT--CCTCCATGATG--  987

seq1  TTTATGAACTGAGAGCTGAAATAAACTTTTTCCTCTC  1035
       ||| ||||||| ||||||   | ||||||  |||||
seq2  ATTAAGAACTGA-AGCTGA---ATACTTTT--CTCTC  1018