BAC Information

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BAC

Clone NameB6Ng01-028M22
Chromosome1 (Build37)
Map Location 148,708,496 - 148,709,586
singlet/doubletsinglet
Overlap geneB830045N13Rik
Upstream geneLOC383571, LOC100043240
Downstream genenone
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-028M22.bB6Ng01-028M22.g
ACCDH859187DH859188
length1,2491,086
definitionDH859187|Mus musculus domesticus DNA, BAC clone: B6Ng01-028M22, 5' end.DH859188|Mus musculus domesticus DNA, BAC clone: B6Ng01-028M22, 3' end.
singlet/doublet---singlet
BLAST hitno hit dataunique
sequence
gaattctcaaaattgaaaatctaggtaagcaaacaggaactacagccaca
tgcatcaccaccagaagataagaaatgaaagaggaactctcaggcattgg
agatacaacagaagaaatagcttcattggttagaaaaaaagttataccta
aaagattaccaacacaaaacatccaggaaatttgacacactatgaaaaga
ccaaaactaatccagacaatatattttataaaatcataggagaaagtttc
tctaacataaagaaggacatgtctgtaaatgtaatcttacatattgggcc
agtaaaggatgtttcctcacaacagaataatcatagaaaaaaggactttt
aaaagctgtaagagtaaaggccaaaaagacatataaaggcaaacttcttg
gaatttcactcaacttctcaatgaagattgtaaaagcttaatgccttgga
cagatatcttgcagccactaagaaaccacagatgccagcacaggctacta
tactcagaaaaactttccatcactgtagatggagaaaacaaggcatttga
taacaaaaccaaatttaaacagtatatgtccacaaatcctaccttacaga
agctactacaaggaaaactctaatcaagggaggttaactgcacctacaac
aacatatgcagtaaatcccacactaccaacacacaaaaaagggaaacaca
caaatgcaacaatataccaacacaccaaccaccaacccacagacacaaac
atacacacaaacatatggaataccactaccaccatcaccactgccatgac
aactaccatcaccaccaccactaacaggagttaacagccattggtcaata
gcatctctcaatatcaacggaattaattccccagtaaaaagacataggct
aatagactggaataaagaaacagaatccctgactctgctgcacacaagaa
acacacctcaatatcaaaaatagacattacttcagaataaagtgatggaa
aaagattttcctagtaattctccaggaagtaagtggcttagatatactct
aatatttaacaaaatagacttcaaccaaataatcaaaagaaatgtagaag
acactttaaccatcaaggaaaatccacagagtctgtaatctaacattatg
gcccaatacaggcacaccttatgaagaaacttgtaagtaatcaattgtac
tcgacttaattggaactcagtccctttctttatgggagatattcctacc
gaattctagaaagtatttgctttctttatttctttctttcatgaccaaat
gatcattgaatagagagtcattcaatttccattactatgtatgcttccca
gtgtatctgttgacatggtggtctgataatatacaaggaattatttcaat
tttctcatatctgttgaaacttgctttgttgcagaccttatatttttgac
aatattttggagaaggatttatgaggaactgagaagaaggtatattcttt
tgtgtttggttgaaatattctaaagatgtttgttaggtccatttcattta
tattgtctgttactttcacatgtctaggttttgtttttgtttggataact
tttcaactggtaagttggtgtgactatatatgtaatgtctttaagaagat
gaggagtttaactgaagcgttaatgaccttctattccctactgcctgtgt
acatggaattctccacaatacctctgctctaccattgtcttctactgctc
tgtattgtgcccatactttaggtactatcactcttggttatttcagtacg
catacttcacatttgtaatacccctgaaaatattagcatagcttggcttt
tattttatagaacatatgttgtatgattatgtatttctaatataccaaga
acttgtaattttaagttttcatttgtgttttaatgcttccttacccactg
tctccatacaatattatcaaaatgttgcctgatacataatcacaacttta
taagcatttactgactaaatttgcttatataagttttccataattgaact
ccttaaaaattgtctatattttcatatattgctcttttgaaggatcagag
caatgatttatcatttgttgaaatgattttatttttacttctataatcca
attttctcaaagattttgtggatatgattttgagtcttgaggcattaatt
atgatttgagcattttgttgcattagtgttgttattctttctttgatggg
atagtagattaaaaatcaaacattgtattcctctgctcctattcaggttt
tctactatgaactacccctggaatcccttgtctttt
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr1_148708496_148709586
seq2: B6Ng01-028M22.g_67_1152

seq1  GAATTCTAGAAAGTATTTGCTTTCTTTATTTCTTTCTTTCATGACCAAAT  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCTAGAAAGTATTTGCTTTCTTTATTTCTTTCTTTCATGACCAAAT  50

seq1  GATCATTGAATAGAGAGTCATTCAATTTCCATTACTATGTATGCTTCCCA  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GATCATTGAATAGAGAGTCATTCAATTTCCATTACTATGTATGCTTCCCA  100

seq1  GTGTATCTGTTGACATGGTGGTCTGATAATATACAAGGAATTATTTCAAT  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTGTATCTGTTGACATGGTGGTCTGATAATATACAAGGAATTATTTCAAT  150

seq1  TTTCTCATATCTGTTGAAACTTGCTTTGTTGCAGACCTTATATTTTTGAC  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTCTCATATCTGTTGAAACTTGCTTTGTTGCAGACCTTATATTTTTGAC  200

seq1  AATATTTTGGAGAAGGATTTATGAGGAACTGAGAAGAAGGTATATTCTTT  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATATTTTGGAGAAGGATTTATGAGGAACTGAGAAGAAGGTATATTCTTT  250

seq1  TGTGTTTGGTTGAAATATTCTAAAGATGTTTGTTAGGTCCATTTCATTTA  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTGTTTGGTTGAAATATTCTAAAGATGTTTGTTAGGTCCATTTCATTTA  300

seq1  TATTGTCTGTTACTTTCACATGTCTAGGTTTTGTTTTTGTTTGGATAACT  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATTGTCTGTTACTTTCACATGTCTAGGTTTTGTTTTTGTTTGGATAACT  350

seq1  TTTCAACTGGTAAGTTGGTGTGACTATATATGTAATGTCTTTAAGAAGAT  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTCAACTGGTAAGTTGGTGTGACTATATATGTAATGTCTTTAAGAAGAT  400

seq1  GAGGAGTTTAACTGAAGCGTTAATGACCTTCTATTCCCTACTGCCTGTGT  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGGAGTTTAACTGAAGCGTTAATGACCTTCTATTCCCTACTGCCTGTGT  450

seq1  ACATGGAATTCTCCACAATACCTCTGCTCTACCATTGTCTTCTACTGCTC  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACATGGAATTCTCCACAATACCTCTGCTCTACCATTGTCTTCTACTGCTC  500

seq1  TGTATTGTGCCCATACTTTAGGTACTATCACTCTTGGTTATTTCAGTACG  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTATTGTGCCCATACTTTAGGTACTATCACTCTTGGTTATTTCAGTACG  550

seq1  CATACTTCACATTTGTAATACCCCTGAAAATATTAGCATAGCTTGGCTTT  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATACTTCACATTTGTAATACCCCTGAAAATATTAGCATAGCTTGGCTTT  600

seq1  TATTTTATAGAACATATGTTGTATGATTATGTATTTCTAATATACCAAGA  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATTTTATAGAACATATGTTGTATGATTATGTATTTCTAATATACCAAGA  650

seq1  ACTTGTAATTTTAAGTTTTCATTTGTGTTTTAATGCTTCCTTACCCACTG  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTTGTAATTTTAAGTTTTCATTTGTGTTTTAATGCTTCCTTACCCACTG  700

seq1  TCTCCATACAATATTATCAAAATGTTGCCTGATACATAATCACAACTTTA  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTCCATACAATATTATCAAAATGTTGCCTGATACATAATCACAACTTTA  750

seq1  TAAGCATTTACTGACTAAATTTGCTTATATAAGTTTTCCATAATTGAACT  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAAGCATTTACTGACTAAATTTGCTTATATAAGTTTTCCATAATTGAACT  800

seq1  CCTTAAAAATTGTCTATATTTTCATATATTGCTCTTTTGAAGGATCAGAG  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTTAAAAATTGTCTATATTTTCATATATTGCTCTTTTGAAGGATCAGAG  850

seq1  CAATGATTTATCATTTGTTGAAATGATTTTATTTTTACTTCTATAATCCA  900
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAATGATTTATCATTTGTTGAAATGATTTTATTTTTACTTCTATAATCCA  900

seq1  ATTTTCTCAAAAGATTTTGTGGATATTGATTTTGAAGTCTTGAGGCATTA  950
      |||||||| |||||||||||||||| |||||||| |||||||||||||||
seq2  ATTTTCTC-AAAGATTTTGTGGATA-TGATTTTG-AGTCTTGAGGCATTA  947

seq1  ATTATGATTTGAGCATTTTGTTGCATTAGTG-TGTTATTCTTTCTTTGAT  999
      ||||||||||||||||||||||||||||||| ||||||||||||||||||
seq2  ATTATGATTTGAGCATTTTGTTGCATTAGTGTTGTTATTCTTTCTTTGAT  997

seq1  GGGGATAAGGTAGATTAAAAATCAAACATTGTATTCCTCTTGCT-CTATT  1048
       ||||||  |||||||||||||||||||||||||||||| |||| |||||
seq2  -GGGATA--GTAGATTAAAAATCAAACATTGTATTCCTC-TGCTCCTATT  1043

seq1  CAAGTGTTCTACTATTGAACTACACCT-GAATACCTTGTCTTTT  1091
      || || |||||||| |||||||| ||| |||| |||||||||||
seq2  CAGGTTTTCTACTA-TGAACTACCCCTGGAATCCCTTGTCTTTT  1086