BAC Information

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BAC

Clone NameB6Ng01-029J08
Chromosome1 (Build37)
Map Location 100,560,800 - 100,561,344
singlet/doubletsinglet
Overlap genenone
Upstream geneHisppd1, Zh2c2, Pam, LOC100041823, LOC666153, LOC100040887, Slco6d1, LOC100041868, EG666182
Downstream genenone
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-029J08.bB6Ng01-029J08.g
ACCDH859746DH859747
length1,274539
definitionDH859746|Mus musculus domesticus DNA, BAC clone: B6Ng01-029J08, 5' end.DH859747|Mus musculus domesticus DNA, BAC clone: B6Ng01-029J08, 3' end.
singlet/doublet---singlet
BLAST hitno hit dataunique
sequence
gaattccatgatcgtgagcccactgtcgtacttctctggctgtgaaatga
gttccttggtcagaagcaatactgtgtggaataccatgacgatagataag
gcattctgtcagtccctgaatggtggttttagcagaggcattgcgtgcag
gaaaggcaaatccataaccagaataagtatctactccagtaagaacaaaa
cgctgtcctttccatgaaggaagtgatccaatgtagtcaacctgccacca
ggttgctggctggtcacctcgaggaatggtgccatatctggggctcagtg
ttggtttctgctgttggcagatctggcaatcagcagcagctgtagccagg
tcagccttggtgagtggaagcccatgttgctgagcccaagcataacctcc
atctcgaccaccatggccactttgttcatgtgcccattgagcaatgacag
ggatggctggggagagaggctgattgtccacagaacgggtcatcttatcc
acttgattattgaactcctcctcggctgaagtcaccttttgatgagcatt
tacatgggacacaaatatcttcacatcctttgcccatttggagagatcta
tccacatacttcttccccagatgtctttctcaccaattttccaattgtga
tctttccaagtccctgaccatccagccaatccattggctacagcccatga
atcagtgaataatcgtacatctggccacttcttcttacaaacaaactgta
ataccatgtgtactgcccgaagttctgcccactgtgaagatttcccttca
cccgtgtctttcaaggttgtcccagaaaggggttgtaatgctgcagctgt
ccacttctgggtggtgcctgcataacgtgcagagccatcagtaaaccagc
tctagtcttcttctcttcggtagttgatcataggaacacctcatgaggct
atagtgcatgcttggcagcagatggcattgtaacaggagtagaatcatag
gcatttgagcactttcttcatgtaacttgcttgtgcttcaggactgttct
ggccgatcacgtttacacttcaattgaaaatagactgctgctgtgcccgt
cccacttatggacctgcgaggtctgaagtacccagctcagatgggtagtt
caggtcgcataataacttgggtctattgtccaacgtcgttcctataggcc
caaacaggcagacgtttcaaggaaatatgtctcaaataggtgaagattgt
ctcaccatctaccaagcctctctg
tcccggtcatagatcttatactctttcatgatcaaaagactgataaaaat
aagaaaatgcaaaataaattataatctttaaaatgaaagtaatatggaaa
aaagaggaaagaggagttagaggcatgtacattttagaatatacagctca
tgtggtatgtgtgtgtgttttgttgtatttgtgttaactatgtctcagtt
aatatagtctgaagtgcatctcttatttacttacatgtgccaacatttaa
aattccaagagctcacagtcagctaatggatggatcataggactcccaat
ggaggagctagagaaagtagccaaggagctaaagggatctgcaaccctat
aggtggaacaacattatgaactaaccagtaccccggagctcttgactcta
gctgcatatatatcaaaagatggcctagtcggccatcactggaaagagag
gcccattggacttgcaaactttatatgccccagtacaggggaacaccagg
gccaaaaagggggagtgggtgggcaggggagtgggggtg
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr1_100560800_100561344
seq2: B6Ng01-029J08.g_64_608

seq1  GAATTCTCCCGGTCATAGATCTTATACTCTTTCATGATCAAAAGACTGAT  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCTCCCGGTCATAGATCTTATACTCTTTCATGATCAAAAGACTGAT  50

seq1  AAAAATAAGAAAATGCAAAATAAATTATAATCTTTAAAATGAAAGTAATA  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAAATAAGAAAATGCAAAATAAATTATAATCTTTAAAATGAAAGTAATA  100

seq1  TGGAAAAAAGAGGAAAGAGGAGTTAGAGGCATGTACATTTTAGAATATAC  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGAAAAAAGAGGAAAGAGGAGTTAGAGGCATGTACATTTTAGAATATAC  150

seq1  AGCTCATGTGGTATGTGTGTGTGTTTTGTTGTATTTGTGTTAACTATGTC  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGCTCATGTGGTATGTGTGTGTGTTTTGTTGTATTTGTGTTAACTATGTC  200

seq1  TCAGTTAATATAGTCTGAAGTGCATCTCTTATTTACTTACATGTGCCAAC  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCAGTTAATATAGTCTGAAGTGCATCTCTTATTTACTTACATGTGCCAAC  250

seq1  ATTTAAAATTCCAAGAGCTCACAGTCAGCTAATGGATGGATCATAGGACT  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTTAAAATTCCAAGAGCTCACAGTCAGCTAATGGATGGATCATAGGACT  300

seq1  CCCAATGGAGGAGCTAGAGAAAGTAGCCAAGGAGCTAAAGGGATCTGCAA  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCCAATGGAGGAGCTAGAGAAAGTAGCCAAGGAGCTAAAGGGATCTGCAA  350

seq1  CCCTATAGGTGGAACAACATTATGAACTAACCAGTACCCCGGAGCTCTTG  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCCTATAGGTGGAACAACATTATGAACTAACCAGTACCCCGGAGCTCTTG  400

seq1  ACTCTAGCTGCATATATATCAAAAGATGGCCTAGTCGGCCATCACTGGAA  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTCTAGCTGCATATATATCAAAAGATGGCCTAGTCGGCCATCACTGGAA  450

seq1  AGAGAGGCCCATTGGACTTGCAAACTTTATATGCCCCAGTACAGGGGAAC  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGAGAGGCCCATTGGACTTGCAAACTTTATATGCCCCAGTACAGGGGAAC  500

seq1  ACCAGGGCCAAAAAGGGGGAGTGGGTGGGCAGGGGAGTGGGGGTG  545
      |||||||||||||||||||||||||||||||||||||||||||||
seq2  ACCAGGGCCAAAAAGGGGGAGTGGGTGGGCAGGGGAGTGGGGGTG  545