BAC Information

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BAC

Clone NameB6Ng01-030L21
Chromosome1 (Build37)
Map Location 148,517,960 - 148,518,967
singlet/doubletsinglet
Overlap geneB830045N13Rik
Upstream geneLOC383571
Downstream geneLOC100043240
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-030L21.bB6Ng01-030L21.g
ACCDH860556DH860557
length1,1811,001
definitionDH860556|Mus musculus domesticus DNA, BAC clone: B6Ng01-030L21, 5' end.DH860557|Mus musculus domesticus DNA, BAC clone: B6Ng01-030L21, 3' end.
singlet/doublet---singlet
BLAST hitno hit dataunique
sequence
gaattctttgttcagttctgagccccattttttaatggggatatttggtt
ttatagagtctaccttcttgagttctttatatgtattggatattagtccc
ctatccgttttgggataggtaaaaatcctttcccaatctgttggtggtct
ttttgtcttattgacagtgtcttttgccttgcagaagctttgcaatttta
tgaggtcccatttatcaattcttgatcttacagcacaagccattgctgtt
ctattcaggaatttttcccctgtaccttcgaggatcttcgaggcttttcc
ctactttctcctctataagtttcagtgtctctggttttaagtggagttcc
ttaatccacttagatttgaccttagtacaatgagatagaaatggatcaat
tcgcaattttctacatgataacagccagttgtgccagtaccatttgttga
aaatgctgtctgtcaaacatcaagtgaccataggtgtgtgggttcatctc
tgggtcttcaattctgttccgctggtctacttgtctgtcactataccagt
accatgcagtttttatcacaattgctctgtagtacagctttaggtcgggc
atggtgattccaccagaggttcttttatcctcgagaagagtttttgctat
tctaggttttttgttattccagatgaatctgcctattgccctttctaatt
cgttgaagaattgagttggaattttgatggggattgcattgaatctgtag
attgcttttggcaagatagccatttttactatattgatcctgccgatcca
tgagcacgagagatctttccatcttctgagatcttctttaatttcttctt
cagagacatgaagttctatcatacagatctttcacttcctagttagagtc
atgccaagatattttatatatttgtgactatgagaaggtgtgtttcccta
atttctttctcagctgtatcttgtgtagagaaaggcatgactggttgagt
tattttatatcagctactcacgagctgttgtcaggtaggatctctgtgga
attttaggtcactatatacatctatatctgcgcaaaggatttggaccttc
ctcatggaacctgatcctttatgccagtctgcggatcagaagtatgtatg
tagaacgtctgcgcatatgagaggtacatca
gaattcctgatctttccaaaacttttatcatgaatgggtgttggatcttg
tcaaatgctttttctgcatctaacgagatgatcatgtggtttttgtcttt
gagtttgtttatataatggattacattgatggattttcgtatattaaacc
atccctgcatccctggaataaaacctacttggtcaggatggatgattgct
ttaatgtgttcttggattcggttagcgagaattttattgaggatttttgc
atcgatattcataagagaaattggtctgaagttctctatctttgttggat
ctttctgtggtttaggtatcagagtaatagtggcttcataaaatgagtag
ggtagagtaccttctacttctattttgtgaaatagtttgtgcagaactgg
aattagatcttctttgaaggtctgatagaactctgtattaaacccgtctg
gtcctgggctttttttggctgggagaccaagttctttatctatacaaatt
aacactaaccaatgaaaatatttagcttatgaaactctgaaactgttaaa
acaaagagtcagtaaaataattcaaaatataggaataggaatgggatttc
aaaccacagttcctcaggtgaaaaatgtcaagaataagcaacattgtcct
catgacttcaaaaacttaattttatttgttgagctggaaagatgagacat
caattaggtgtatttgttgatcttccaatgaccccaagtttgattttcag
aagcccaaaatggtgcttaatcatctataatgcaaatcctttatgatctg
tcacccttgctggcctatatgtgtattgcacctatatggtgtcaagatag
aattttcaggctagacacacatacagaaaaaataaatgaaataaacttta
aatatttattttcattaagttttgtgtgtgcttttatatgcggatttagc
tataattctttcgggtttgcacaattgtcactagaagtcagtgggtatgc
t
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr1_148517960_148518967
seq2: B6Ng01-030L21.g_65_1065 (reverse)

seq1  AGCATACCAACTGAC-TCTAGTGACATTTGTGCAAACCCCGAAAGAATTA  49
      |||||||| |||||| |||||||||| ||||||||| |||||||||||||
seq2  AGCATACCCACTGACTTCTAGTGACAATTGTGCAAA-CCCGAAAGAATTA  49

seq1  TAGCTAAATCCCGCATATAAAAGCACACACATAAACTTAATGAAAATAAA  99
      ||||||||| ||||||||||||||||||||| ||||||||||||||||||
seq2  TAGCTAAAT-CCGCATATAAAAGCACACACA-AAACTTAATGAAAATAAA  97

seq1  TATTTTAAAGTTTTATTTTCATTTTATTTTTTTCTGTATGTGTGTCTAGC  149
      || ||||||||||   ||||||||   |||||||||||||||||||||||
seq2  TA-TTTAAAGTTT--ATTTCATTT--ATTTTTTCTGTATGTGTGTCTAGC  142

seq1  CTGAAAATTCTATCTTGACACCATATAGGTGCAATACACATATAGGCCAG  199
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGAAAATTCTATCTTGACACCATATAGGTGCAATACACATATAGGCCAG  192

seq1  CAAGGGTGACAGATCATAAAGGATTTGCATTATAGATGATTAAGCACCAT  249
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAAGGGTGACAGATCATAAAGGATTTGCATTATAGATGATTAAGCACCAT  242

seq1  TTTGGGCTTCTGAAAATCAAACTTGGGGTCATTGGAAGATCAACAAATAC  299
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTGGGCTTCTGAAAATCAAACTTGGGGTCATTGGAAGATCAACAAATAC  292

seq1  ACCTAATTGATGTCTCATCTTTCCAGCTCAACAAATAAAATTAAGTTTTT  349
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACCTAATTGATGTCTCATCTTTCCAGCTCAACAAATAAAATTAAGTTTTT  342

seq1  GAAGTCATGAGGACAATGTTGCTTATTCTTGACATTTTTCACCTGAGGAA  399
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAAGTCATGAGGACAATGTTGCTTATTCTTGACATTTTTCACCTGAGGAA  392

seq1  CTGTGGTTTGAAATCCCATTCCTATTCCTATATTTTGAATTATTTTACTG  449
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGTGGTTTGAAATCCCATTCCTATTCCTATATTTTGAATTATTTTACTG  442

seq1  ACTCTTTGTTTTAACAGTTTCAGAGTTTCATAAGCTAAATATTTTCATTG  499
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTCTTTGTTTTAACAGTTTCAGAGTTTCATAAGCTAAATATTTTCATTG  492

seq1  GTTAGTGTTAATTTGTATAGATAAAGAACTTGGTCTCCCAGCCAAAAAAA  549
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTTAGTGTTAATTTGTATAGATAAAGAACTTGGTCTCCCAGCCAAAAAAA  542

seq1  GCCCAGGACCAGACGGGTTTAATACAGAGTTCTATCAGACCTTCAAAGAA  599
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCCCAGGACCAGACGGGTTTAATACAGAGTTCTATCAGACCTTCAAAGAA  592

seq1  GATCTAATTCCAGTTCTGCACAAACTATTTCACAAAATAGAAGTAGAAGG  649
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GATCTAATTCCAGTTCTGCACAAACTATTTCACAAAATAGAAGTAGAAGG  642

seq1  TACTCTACCCTACTCATTTTATGAAGCCACTATTACTCTGATACCTAAAC  699
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TACTCTACCCTACTCATTTTATGAAGCCACTATTACTCTGATACCTAAAC  692

seq1  CACAGAAAGATCCAACAAAGATAGAGAACTTCAGACCAATTTCTCTTATG  749
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CACAGAAAGATCCAACAAAGATAGAGAACTTCAGACCAATTTCTCTTATG  742

seq1  AATATCGATGCAAAAATCCTCAATAAAATTCTCGCTAACCGAATCCAAGA  799
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATATCGATGCAAAAATCCTCAATAAAATTCTCGCTAACCGAATCCAAGA  792

seq1  ACACATTAAAGCAATCATCCATCCTGACCAAGTAGGTTTTATTCCAGGGA  849
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACACATTAAAGCAATCATCCATCCTGACCAAGTAGGTTTTATTCCAGGGA  842

seq1  TGCAGGGATGGTTTAATATACGAAAATCCATCAATGTAATCCATTATATA  899
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGCAGGGATGGTTTAATATACGAAAATCCATCAATGTAATCCATTATATA  892

seq1  AACAAACTCAAAGACAAAAACCACATGATCATCTCGTTAGATGCAGAAAA  949
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AACAAACTCAAAGACAAAAACCACATGATCATCTCGTTAGATGCAGAAAA  942

seq1  AGCATTTGACAAGATCCAACACCCATTCATGATAAAAGTTTTGGAAAGAT  999
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGCATTTGACAAGATCCAACACCCATTCATGATAAAAGTTTTGGAAAGAT  992

seq1  CAGGAATTC  1008
      |||||||||
seq2  CAGGAATTC  1001