BAC Information

Click to search

BAC

Clone NameB6Ng01-031H04
Chromosome1 (Build37)
Map Location 144,029,435 - 144,030,042
singlet/doubletsinglet
Overlap genenone
Upstream geneEG226472, LOC639376
Downstream geneLOC545369
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-031H04.bB6Ng01-031H04.g
ACCDH861060DH861061
length6081,095
definitionDH861060|Mus musculus domesticus DNA, BAC clone: B6Ng01-031H04, 5' end.DH861061|Mus musculus domesticus DNA, BAC clone: B6Ng01-031H04, 3' end.
singlet/doubletsinglet---
BLAST hituniqueno hit data
sequence
gaattcctgtgaagaaattaatctggctgagtaattggtaataattccaa
tttattgagtggtattttttcccttaatgtggtcctatttattgattatg
tatttcatttttttctagcctgtttctgacattcttctctaaacagggct
tcccattgtacagacagaggactagggagagtagatcatcatatatcttt
ccagtcttggggttaaaaagtgtgctattaaaactttgtaaaatatattt
ggtcctggacatgaactatgtccttgctaaaggattggtatactcctttt
aattctgctgcaaggagagatgacaagccatcagatattgtctagataca
tttagattagccagacaagtccttacgggtagaggttctagatccatgag
ccattaagaccaggggatgggtaatgggagaagctaggaataattgtttc
tagcatctcaaaattatagagatgccataagtagtggcactgagggttga
ggagggctatctctgtgttttggggaatcttgttcgtaatttttagttct
ttgtcctctgtagccaatgaggccttgtaaggtgggagagtagggtaaag
tggggatg
gaattcaagaagctaacctcgtataaaccaaacatcccaatcaaaaaatg
ggttatagaagtaaaccgagaattcacaacagagaaatcttgactagcca
aataaaagcacttaagtaaatgttcaaagacttgtgtgatcagaggaata
caactcagaatgaccctcagattccatctcacaccaataagaatggctaa
gatcaattctcaggttacagaacatgttgtgaagaatgtgaagaaagggg
agcactcctccgttactgatgggattgcaacctgttacaaccactctgga
aatcaatccagagttttctcagaaaattgggaataaatctacctgaaggt
ccaggtataccactcttaggcatagaaccaaaagatgccttacaatgctt
caagggcacatgctccattatgttcatagtggccttatttctgagagcca
gaagctagaaacaagccagacgtccctaaaaggaagaatggatacataaa
gtttggttcagttacacaatagaatactcctcagtcattaagaatgagga
caagtgagttttgcaggcaaagggatggacctagaaaatattaccctgag
tgaggtaacccagatacaaaagaacatgcatggtatatactcacaaataa
gtggatattagccaaaaatgtacaaaatactcaagataaaatccacagaa
ctcaaggttaatcagctgaggtgcccaaatggatatgcttcactcccaat
tgggagtgagaagaaagcaatcatcggacaggagggaggggtaaagaaga
gtgggacctggcaagagagggcagcagaagagaaaagcaaacataatcag
tatttggggagaatagaagggaaccctgaggacaggagaatgatggaaac
aggcaacttgggagatgggaagtggggtgacctctagatgtaccagagat
ctgggagtgagaaatctcagactcatggaggaccttgttaaatgccacag
taggagaggatcttgtacgtcatctcagtaaaagaaggcataagtgaagg
atggggtgcatcatgcaaacctgcctctaaattccccgtgtcagt
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr1_144029435_144030042
seq2: B6Ng01-031H04.b_46_653 (reverse)

seq1  CATCCCCACTTTACCCTACTCTCCCACCTTACAAGGCCTCATTGGCTACA  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATCCCCACTTTACCCTACTCTCCCACCTTACAAGGCCTCATTGGCTACA  50

seq1  GAGGACAAAGAACTAAAAATTACGAACAAGATTCCCCAAAACACAGAGAT  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGGACAAAGAACTAAAAATTACGAACAAGATTCCCCAAAACACAGAGAT  100

seq1  AGCCCTCCTCAACCCTCAGTGCCACTACTTATGGCATCTCTATAATTTTG  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGCCCTCCTCAACCCTCAGTGCCACTACTTATGGCATCTCTATAATTTTG  150

seq1  AGATGCTAGAAACAATTATTCCTAGCTTCTCCCATTACCCATCCCCTGGT  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGATGCTAGAAACAATTATTCCTAGCTTCTCCCATTACCCATCCCCTGGT  200

seq1  CTTAATGGCTCATGGATCTAGAACCTCTACCCGTAAGGACTTGTCTGGCT  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTAATGGCTCATGGATCTAGAACCTCTACCCGTAAGGACTTGTCTGGCT  250

seq1  AATCTAAATGTATCTAGACAATATCTGATGGCTTGTCATCTCTCCTTGCA  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATCTAAATGTATCTAGACAATATCTGATGGCTTGTCATCTCTCCTTGCA  300

seq1  GCAGAATTAAAAGGAGTATACCAATCCTTTAGCAAGGACATAGTTCATGT  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCAGAATTAAAAGGAGTATACCAATCCTTTAGCAAGGACATAGTTCATGT  350

seq1  CCAGGACCAAATATATTTTACAAAGTTTTAATAGCACACTTTTTAACCCC  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCAGGACCAAATATATTTTACAAAGTTTTAATAGCACACTTTTTAACCCC  400

seq1  AAGACTGGAAAGATATATGATGATCTACTCTCCCTAGTCCTCTGTCTGTA  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGACTGGAAAGATATATGATGATCTACTCTCCCTAGTCCTCTGTCTGTA  450

seq1  CAATGGGAAGCCCTGTTTAGAGAAGAATGTCAGAAACAGGCTAGAAAAAA  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAATGGGAAGCCCTGTTTAGAGAAGAATGTCAGAAACAGGCTAGAAAAAA  500

seq1  ATGAAATACATAATCAATAAATAGGACCACATTAAGGGAAAAAATACCAC  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGAAATACATAATCAATAAATAGGACCACATTAAGGGAAAAAATACCAC  550

seq1  TCAATAAATTGGAATTATTACCAATTACTCAGCCAGATTAATTTCTTCAC  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCAATAAATTGGAATTATTACCAATTACTCAGCCAGATTAATTTCTTCAC  600

seq1  AGGAATTC  608
      ||||||||
seq2  AGGAATTC  608