BAC Information

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BAC

Clone NameB6Ng01-031P23
Chromosome1 (Build37)
Map Location 150,748,519 - 150,892,960
singlet/doubletdoublet
Overlap geneLOC100042792, LOC435647
Upstream genenone
Downstream geneLOC100042813, Pla2g4a
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-031P23.bB6Ng01-031P23.g
ACCDH861459DH861460
length1,187849
definitionDH861459|Mus musculus domesticus DNA, BAC clone: B6Ng01-031P23, 5' end.DH861460|Mus musculus domesticus DNA, BAC clone: B6Ng01-031P23, 3' end.
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(150,748,519 - 150,749,729)(150,892,113 - 150,892,960)
sequence
gaattcagcaagtattgcaaaggagagaagttttggtcagtggagcagct
ggcaactttcagatggttctctaggaaggcaggtttttatgagtacatat
gcattggacattgttcctacagttactgcctctgattcacccatacttct
gtaacctcttataagtacttataaccttcacttgtataagtgctctgcac
aataaattcactaatctagacttagaggtaatatttttggtctttcattg
gtggccatctgagataaactgatagttactgacatcacaagagaaaaatt
acacaactaaatatgtgaacaaatgcataaatgagaaacatattagagat
tcatatagatgtaccatggtttcaaagaatgttggtaattgcaaaataat
ctattcggggtaatcattaaccaggtaggggcaattcaattcacggtatt
gagaaacaaaatattcaaggaagttcatgaagaactctatatcaggtagc
attttaagtactgcctatgcattttctcttttaaatctcatgatatccct
gcaatttcaacaataagcttaagcatgaagataatatttgtatgaacaga
gccattgagatatgcccttgcctttttttttcccagatgaataactttgg
ctttcggcttgctacaatggtcattcctatcatgaataatagataaaccc
atgcttgactttttaaaaggcttattatgtttctaattttaaaacaattt
tagaaagtatgatattttgataaaactatttggatctgaaatccactgtt
aattggaagcatgccattttaaattgtattaattctttgttagcaataaa
ttaaaaactgcataatatgtggttctaaaatggtcactcaaaatccttta
catgtatgagatatagaaaccatggttatgctcataatgtaagcacagtc
cttttgtaccccttgtactgtaaatatgagttgtagacaggtagaaatat
ctcctgtcatttgaaggttatctactacatatggagttaaacactgaaca
tagcaaatgccactacagtttatataacctggagagtagaaaaagcttgg
agcacgaatggtgatgatttatcaccatggtggaaatttagaattatcgg
aaagtgaatgaaaattcattttccactcatgccttca
gaattccattatgcttcacatctggttgagaattcctatgagaacaactt
ttaaaaagaattcttgaaacaagaaattacagattatgtatttctcagaa
gacatgccaagctagtcaatacttctttatacaaactcaatgtcaacata
tggagaaattgcagtatctttagcagctgattgttcaccagatctgaaca
aatggttaagttatagtagatatttttctctaacactttgtgacacagat
tatttcatatgcatactttattaaccatgatcatgacagctttactaaaa
tcatactattttgtcatagcacagtgaaaatattttttataaataagcat
ttctatagatttctctatttgaataatattttaaaacttgtaatatttca
tcaaatggtcagtttatgtgtgtattcaaagattttaactactgctttta
gaggaatactaaaagtctaaaattcagaatttcaatttttcatagctgaa
tggtatatgtgccacattattattatccattaaccagctgaagtatatta
aaaatgatatcacttcttaactattatcaacagagccactacgatctatg
ctgtttctagagtatgaagtccatcacaaaattcataggtaaatacatgg
aataagaaatattatactgagtgagataacacagtcctacaaagacagat
accacacagtttctcttatttgtggattctagctctaacttgttagatgc
cagtatataagggaccatggagggacagggtaatagggaagggaaattgt
aggacacagttgctaaaacgtgtgaaattgggtagagggggggggtgtg
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr1_150748519_150749729
seq2: B6Ng01-031P23.b_44_1230

seq1  GAATTCAGCAAGTATTGCAAAGGAGAGAAGTTTTGGTCAGTGGAGCAGCT  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCAGCAAGTATTGCAAAGGAGAGAAGTTTTGGTCAGTGGAGCAGCT  50

seq1  GGCAACTTTCAGATGGTTCTCTAGGAAGGCAGGTTTTTATGAGTACATAT  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGCAACTTTCAGATGGTTCTCTAGGAAGGCAGGTTTTTATGAGTACATAT  100

seq1  GCATTGGACATTGTTCCTACAGTTACTGCCTCTGATTCACCCATACTTCT  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCATTGGACATTGTTCCTACAGTTACTGCCTCTGATTCACCCATACTTCT  150

seq1  GTAACCTCTTATAAGTACTTATAACCTTCACTTGTATAAGTGCTCTGCAC  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTAACCTCTTATAAGTACTTATAACCTTCACTTGTATAAGTGCTCTGCAC  200

seq1  AATAAATTCACTAATCTAGACTTAGAGGTAATATTTTTGGTCTTTCATTG  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATAAATTCACTAATCTAGACTTAGAGGTAATATTTTTGGTCTTTCATTG  250

seq1  GTGGCCATCTGAGATAAACTGATAGTTACTGACATCACAAGAGAAAAATT  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTGGCCATCTGAGATAAACTGATAGTTACTGACATCACAAGAGAAAAATT  300

seq1  ACACAACTAAATATGTGAACAAATGCATAAATGAGAAACATATTAGAGAT  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACACAACTAAATATGTGAACAAATGCATAAATGAGAAACATATTAGAGAT  350

seq1  TCATATAGATGTACCATGGTTTCAAAGAATGTTGGTAATTGCAAAATAAT  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCATATAGATGTACCATGGTTTCAAAGAATGTTGGTAATTGCAAAATAAT  400

seq1  CTATTCGGGGTAATCATTAACCAGGTAGGGGCAATTCAATTCACGGTATT  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTATTCGGGGTAATCATTAACCAGGTAGGGGCAATTCAATTCACGGTATT  450

seq1  GAGAAACAAAATATTCAAGGAAGTTCATGAAGAACTCTATATCAGGTAGC  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGAAACAAAATATTCAAGGAAGTTCATGAAGAACTCTATATCAGGTAGC  500

seq1  ATTTTAAGTACTGCCTATGCATTTTCTCTTTTAAATCTCATGATATCCCT  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTTTAAGTACTGCCTATGCATTTTCTCTTTTAAATCTCATGATATCCCT  550

seq1  GCAATTTCAACAATAAGCTTAAGCATGAAGATAATATTTGTATGAACAGA  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCAATTTCAACAATAAGCTTAAGCATGAAGATAATATTTGTATGAACAGA  600

seq1  GCCATTGAGATATGCCCTTGCCTTTTTTTTTCCCAGATGAATAACTTTGG  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCCATTGAGATATGCCCTTGCCTTTTTTTTTCCCAGATGAATAACTTTGG  650

seq1  CTTTCGGCTTGCTACAATGGTCATTCCTATCATGAATAATAGATAAACCC  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTTCGGCTTGCTACAATGGTCATTCCTATCATGAATAATAGATAAACCC  700

seq1  ATGCTTGACTTTTTAAAAGGCTTATTATG-TTCTAATTTTAAAACAATTT  749
      ||||||||||||||||||||||||||||| ||||||||||||||||||||
seq2  ATGCTTGACTTTTTAAAAGGCTTATTATGTTTCTAATTTTAAAACAATTT  750

seq1  TAGAAAGTATGATATTTTGATAAAACTATTTGGATCTGAAATCCACTGTT  799
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAGAAAGTATGATATTTTGATAAAACTATTTGGATCTGAAATCCACTGTT  800

seq1  AATTGGAAGCATGCCATTTTAAATTGTATTAATTCTTTGTTAGCAATAAA  849
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATTGGAAGCATGCCATTTTAAATTGTATTAATTCTTTGTTAGCAATAAA  850

seq1  TTAAAAACTGCATAATATGT-GTTCTAAAATGGTCACTCAAAAATCCTTT  898
      |||||||||||||||||||| |||||||||||||||||| ||||||||||
seq2  TTAAAAACTGCATAATATGTGGTTCTAAAATGGTCACTC-AAAATCCTTT  899

seq1  ACATGTATGAGATATAGAAACCCATGGTTATGCTCATAAATGTAAGCACA  948
      |||||||||||||||||||| |||||||||||||||| ||||||||||||
seq2  ACATGTATGAGATATAGAAA-CCATGGTTATGCTCAT-AATGTAAGCACA  947

seq1  GTCCTTTGTAACCCCTTGTTACTGTAAAATATGAGTGTAAGACAGGTAGA  998
      |||||||   |||||||| |||||| ||||||||||   |||||||||||
seq2  GTCCTTTTGTACCCCTTG-TACTGT-AAATATGAGTTGTAGACAGGTAGA  995

seq1  TATATCT-CTGTCATTTTGAAAGTTAATCTTAACTACATAT-GAGTTATA  1046
       |||||| |||||| |||||| ||| ||||  ||||||||| |||||| |
seq2  AATATCTCCTGTCA-TTTGAAGGTT-ATCT--ACTACATATGGAGTTA-A  1040

seq1  CCACTGAAACAATAGCAAAATGCCACTACAGTTTATATTACACTGAGAGT  1096
       |||||||   ||||| ||||||||||||||||||||| ||   ||||||
seq2  ACACTGAA--CATAGC-AAATGCCACTACAGTTTATATAACCTGGAGAGT  1087

seq1  AGAAAAAGCTTTGAGCACGA--TGTGATGATTTATTCAACCCATATGTGG  1144
      ||||||||||| ||||||||   ||||||||||| |||  ||||  ||||
seq2  AGAAAAAGCTTGGAGCACGAATGGTGATGATTTA-TCA--CCAT-GGTGG  1133

seq1  ATATTTAGGAAATAAATCCAAGAAAATGAAATTAAAAATTATTCATATTT  1194
      | ||||||  |||  |||   |||| ||||  | ||||||      ||||
seq2  AAATTTAG--AAT-TATC--GGAAAGTGAA--TGAAAATT-----CATTT  1171

seq1  TCACACTCATGCATTCA  1211
      || ||||||||| ||||
seq2  TC-CACTCATGCCTTCA  1187

seq1: chr1_150892113_150892960
seq2: B6Ng01-031P23.g_66_914 (reverse)

seq1  CACA-CCTCCCCCTCTACCCAATTTCACACGTTTTAGCAACTGTGTCCTA  49
      |||| || ||||||||||||||||||||||||||||||||||||||||||
seq2  CACACCCCCCCCCTCTACCCAATTTCACACGTTTTAGCAACTGTGTCCTA  50

seq1  CAATTTCCCTTCCCTATTACCCTGTCCCTCCATGGTCCCTTATATACTGG  99
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAATTTCCCTTCCCTATTACCCTGTCCCTCCATGGTCCCTTATATACTGG  100

seq1  CATCTAACAAGTTAGAGCTAGAATCCACAAATAAGAGAAACTGTGTGGTA  149
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATCTAACAAGTTAGAGCTAGAATCCACAAATAAGAGAAACTGTGTGGTA  150

seq1  TCTGTCTTTGTAGGACTGTGTTATCTCACTCAGTATAATATTTCTTATTC  199
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTGTCTTTGTAGGACTGTGTTATCTCACTCAGTATAATATTTCTTATTC  200

seq1  CATGTATTTACCTATGAATTTTGTGATGGACTTCATACTCTAGAAACAGC  249
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATGTATTTACCTATGAATTTTGTGATGGACTTCATACTCTAGAAACAGC  250

seq1  ATAGATCGTAGTGGCTCTGTTGATAATAGTTAAGAAGTGATATCATTTTT  299
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATAGATCGTAGTGGCTCTGTTGATAATAGTTAAGAAGTGATATCATTTTT  300

seq1  AATATACTTCAGCTGGTTAATGGATAATAATAATGTGGCACATATACCAT  349
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATATACTTCAGCTGGTTAATGGATAATAATAATGTGGCACATATACCAT  350

seq1  TCAGCTATGAAAAATTGAAATTCTGAATTTTAGACTTTTAGTATTCCTCT  399
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCAGCTATGAAAAATTGAAATTCTGAATTTTAGACTTTTAGTATTCCTCT  400

seq1  AAAAGCAGTAGTTAAAATCTTTGAATACACACATAAACTGACCATTTGAT  449
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAAGCAGTAGTTAAAATCTTTGAATACACACATAAACTGACCATTTGAT  450

seq1  GAAATATTACAAGTTTTAAAATATTATTCAAATAGAGAAATCTATAGAAA  499
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAAATATTACAAGTTTTAAAATATTATTCAAATAGAGAAATCTATAGAAA  500

seq1  TGCTTATTTATAAAAAATATTTTCACTGTGCTATGACAAAATAGTATGAT  549
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGCTTATTTATAAAAAATATTTTCACTGTGCTATGACAAAATAGTATGAT  550

seq1  TTTAGTAAAGCTGTCATGATCATGGTTAATAAAGTATGCATATGAAATAA  599
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTAGTAAAGCTGTCATGATCATGGTTAATAAAGTATGCATATGAAATAA  600

seq1  TCTGTGTCACAAAGTGTTAGAGAAAAATATCTACTATAACTTAACCATTT  649
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTGTGTCACAAAGTGTTAGAGAAAAATATCTACTATAACTTAACCATTT  650

seq1  GTTCAGATCTGGTGAACAATCAGCTGCTAAAGATACTGCAATTTCTCCAT  699
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTTCAGATCTGGTGAACAATCAGCTGCTAAAGATACTGCAATTTCTCCAT  700

seq1  ATGTTGACATTGAGTTTGTATAAAGAAGTATTGACTAGCTTGGCATGTCT  749
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGTTGACATTGAGTTTGTATAAAGAAGTATTGACTAGCTTGGCATGTCT  750

seq1  TCTGAGAAATACATAATCTGTAATTTCTTGTTTCAAGAATTCTTTTTAAA  799
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTGAGAAATACATAATCTGTAATTTCTTGTTTCAAGAATTCTTTTTAAA  800

seq1  AGTTGTTCTCATAGGAATTCTCAACCAGATGTGAAGCATAATGGAATTC  848
      |||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTTGTTCTCATAGGAATTCTCAACCAGATGTGAAGCATAATGGAATTC  849