BAC Information

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BAC

Clone NameB6Ng01-032A20
Chromosome1 (Build37)
Map Location 68,336,536 - 68,480,533
singlet/doubletdoublet
Overlap geneErbb4
Upstream geneKif22-ps
Downstream geneLOC667842, EG241084
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-032A20.bB6Ng01-032A20.g
ACCDH861497DH861498
length1,1381,118
definitionDH861497|Mus musculus domesticus DNA, BAC clone: B6Ng01-032A20, 5' end.DH861498|Mus musculus domesticus DNA, BAC clone: B6Ng01-032A20, 3' end.
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(68,336,536 - 68,337,696)(68,479,409 - 68,480,533)
sequence
gaattctccttgaaagattttgattttttaatttttttataaacttaaga
atattctattagcattctaggatgatgtctaattcttttaaacatacaaa
attcaaaatcaatggtactactaagtagaactctgaaattttaatgaatg
tagttaaaatcaaaagtgaatcaaaatctctcatttagtcctctaaaact
tcagcccaactgtttactaatttagtccgtggtaactaagaaagaatttg
agtgataaaatggaaccatggcagatgttacctagcgtgttgtggtaaag
tggaatggcccgtccatgggtagtaaatgcagtcatgactagtgggaccg
ttacacctgcaagcaattgcagaacagaaaacatcattctccatccacag
tggcatgcacacacatgcaccagtgctcacgcatggagccttggaggaag
aacatgagaagaaagcacacccagtacctatccgtcaggccgatgcagtc
ttcaatgcttgaacctatgcacctgcagagatgcaaagtcaaaagaaata
caagaaaagagacgtcagtcatgaagacaaacagagaagaaccagtgaga
caagtactggatgcgccacattcttgttggaatcattaggcagtttctag
aacagtatacttttagaaactgagaggaaatcacttcctagcagaaacac
agaagtgagttgaaataaccactcaagtccaatgccagaaagcatggaga
tagtaaagggaagtttacctgctcccatggataacttgcacatgcattgg
tctttcctgaaacattcgactcatttacatctttcatttctatgcacagc
tatgttaattacttgatagtttaatgactatggctattttcatgtataac
atttctcttaaaacaccattgggcttatgcaaatccccccccaatcataa
aaaggcaatgaacattaattgtagtggagtagccttatgcttgatgctca
ttaaagagatcttggcagaaaaaagtttatatattttatgcagtcccatg
ataattttaaaaatcagatattaaatccttgtagaatctctttaactatt
ttttcatgatgcgatttattaaaaatcaaatgatgatt
gaattcccattctctgcaaagacatggtattttctgctctaggaaaatat
attattggaaaatacattatatgatagggaaatagaatagatgaacataa
tgtatatatttttacatgtagcacataattttatgtaatacataatataa
aatgtaaaaaaataggaaaacattatgtatatgaaacaacaattaaggaa
aaatctgtaactttgagaaagaccaaggaagatagagagaacatagataa
gagtggtaggaagaaagaaatgagagggagaaattatataactaaatttt
aatcttacaacactttacaaactatttaaatattaatataggctgagtga
ctagatgctttaccctagagagaaaaaacccattatttatgctttcagtt
ctgaaaactaaaaaacaaaatatcatttatcttctgatgttaaataaata
ttttaaaaaagcataaactactcagggtgctgattccaaataacgcaaaa
tgacagttggaggatatttgaaacacagcaaatgaacaaagaaaaaaatt
gttgtgttttgaaaataatagtgatctattccctacagtcattaaaacat
agagaattaaaaatccagatgttaaatatctctgaatattatatgaatta
tgaattatcatttgaatgagcaaattcttaattattactaaggggaatgt
aggtagagaatatactaaacatgggccaaagtgttccttttttttccttt
ttgtttttgtatatgtcaaatttgtgtggaacacaaacagctgattttac
tttataaggcgaatagaaccatattatagtgagcaaatgtcttggaattc
tgcccacaagaaactcttatattatatatgcttaggttttacgttccctt
ggatccatgtgttgggttgcacacaaactgtgttaatacctatttttgat
cgtttacaatttgaacacaaatgctgcatgagccatttaaaacattttct
ctgaaaagaatagtttggccaagaaattgaatttatcccttaaatgatca
gtattggctttaagtaacatcattattaaggaagctccgatgaatgatgt
agctggaagcacatgcat
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr1_68336536_68337696
seq2: B6Ng01-032A20.b_41_1178

seq1  GAATTCTCCTTGAAAGATTTTGATTTTTTAATTTTTTTATAAACTTAAGA  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCTCCTTGAAAGATTTTGATTTTTTAATTTTTTTATAAACTTAAGA  50

seq1  ATATTCTATTAGCATTCTAGGATGATGTCTAATTCTTTTAAACATACAAA  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATATTCTATTAGCATTCTAGGATGATGTCTAATTCTTTTAAACATACAAA  100

seq1  ATTCAAAATCAATGGTACTACTAAGTAGAACTCTGAAATTTTAATGAATG  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTCAAAATCAATGGTACTACTAAGTAGAACTCTGAAATTTTAATGAATG  150

seq1  TAGTTAAAATCAAAAGTGAATCAAAATCTCTCATTTAGTCCTCTAAAACT  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAGTTAAAATCAAAAGTGAATCAAAATCTCTCATTTAGTCCTCTAAAACT  200

seq1  TCAGCCCAACTGTTTACTAATTTAGTCCGTGGTAACTAAGAAAGAATTTG  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCAGCCCAACTGTTTACTAATTTAGTCCGTGGTAACTAAGAAAGAATTTG  250

seq1  AGTGATAAAATGGAACCATGGCAGATGTTACCTAGCGTGTTGTGGTAAAG  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTGATAAAATGGAACCATGGCAGATGTTACCTAGCGTGTTGTGGTAAAG  300

seq1  TGGAATGGCCCGTCCATGGGTAGTAAATGCAGTCATGACTAGTGGGACCG  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGAATGGCCCGTCCATGGGTAGTAAATGCAGTCATGACTAGTGGGACCG  350

seq1  TTACACCTGCAAGCAATTGCAGAACAGAAAACATCATTCTCCATCCACAG  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTACACCTGCAAGCAATTGCAGAACAGAAAACATCATTCTCCATCCACAG  400

seq1  TGGCATGCACACACATGCACCAGTGCTCACGCATGGAGCCTTGGAGGAAG  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGCATGCACACACATGCACCAGTGCTCACGCATGGAGCCTTGGAGGAAG  450

seq1  AACATGAGAAGAAAGCACACCCAGTACCTATCCGTCAGGCCGATGCAGTC  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AACATGAGAAGAAAGCACACCCAGTACCTATCCGTCAGGCCGATGCAGTC  500

seq1  TTCAATGCTTGAACCTATGCACCTGCAGAGATGCAAAGTCAAAAGAAATA  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCAATGCTTGAACCTATGCACCTGCAGAGATGCAAAGTCAAAAGAAATA  550

seq1  CAAGAAAAGAGACGTCAGTCATGAAGACAAACAGAGAAGAACCAGTGAGA  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAAGAAAAGAGACGTCAGTCATGAAGACAAACAGAGAAGAACCAGTGAGA  600

seq1  CAAGTACTGGATGCGCCACATTCTTGTTGGAATCATTAGGCAGTTTCTAG  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAAGTACTGGATGCGCCACATTCTTGTTGGAATCATTAGGCAGTTTCTAG  650

seq1  AACAGTATACTTTTAGAAACTGAGAGGAAATCACTTCCTAGCAGAAACAC  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AACAGTATACTTTTAGAAACTGAGAGGAAATCACTTCCTAGCAGAAACAC  700

seq1  AGAAGTGAGTTGAAATAACCACTCAAGTCCAATGCCAGAAAGCATGGAGA  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGAAGTGAGTTGAAATAACCACTCAAGTCCAATGCCAGAAAGCATGGAGA  750

seq1  TAGTAAAGGGAAGTTTACCTGCTCCCATGGATAACTTGCACATGCATTGG  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAGTAAAGGGAAGTTTACCTGCTCCCATGGATAACTTGCACATGCATTGG  800

seq1  TCTTTCCTGAAACATTCGACTCATTTACATCTTTCATTTCTATGCACAGC  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTTTCCTGAAACATTCGACTCATTTACATCTTTCATTTCTATGCACAGC  850

seq1  TATGTTAATTACTTGATAGTTTAATGACTATGGCTATTTTCATGTATAAC  900
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATGTTAATTACTTGATAGTTTAATGACTATGGCTATTTTCATGTATAAC  900

seq1  ATTTCTCTTAAAACACCATTGGGCTTATGCAAAATCCCCCCCCAAATCAA  950
      |||||||||||||||||||||||||||||| |||||||||||| |||| |
seq2  ATTTCTCTTAAAACACCATTGGGCTTATGC-AAATCCCCCCCC-AATC-A  947

seq1  TAAAAAGGCAATGAACAATTAATTGTAGTGGAGTAGCCTTATGCTTGATG  1000
      |||||||||||||||| |||||||||||||||||||||||||||||||||
seq2  TAAAAAGGCAATGAAC-ATTAATTGTAGTGGAGTAGCCTTATGCTTGATG  996

seq1  CTCATTAAAGAGGATCTTGGCAGAAAATAAGTTTATATATTTTAATGCAA  1050
      ||||||||||| ||||||||||||||| ||||||||||||||| |||| |
seq2  CTCATTAAAGA-GATCTTGGCAGAAAA-AAGTTTATATATTTT-ATGC-A  1042

seq1  TTCCCATGGATAATTTTTATAATCAGATTATTTAAATCCTTGGTTATGAA  1100
       |||||| ||||||||| | ||||||||   |||||||||||  || |||
seq2  GTCCCAT-GATAATTTTAAAAATCAGAT--ATTAAATCCTTG--TA-GAA  1086

seq1  TCTCTTTAAACTATTTTTTGTCATTAAATGCGGATTTATTTAAAAATCAA  1150
      ||||||| ||||||||||  ||||   |||| |||||| |||||||||||
seq2  TCTCTTT-AACTATTTTT--TCAT--GATGC-GATTTA-TTAAAAATCAA  1129

seq1  ATGAATTGATT  1161
      ||||  |||||
seq2  ATGA--TGATT  1138

seq1: chr1_68479409_68480533
seq2: B6Ng01-032A20.g_66_1183 (reverse)

seq1  ATGCATGTGCTTCCCACGCCTTACATCATTCATCAGAAGCCTTCCTTAAT  50
      ||||||||||||||  |    ||||||||||||| ||   ||||||||||
seq2  ATGCATGTGCTTCCAGC----TACATCATTCATCGGA--GCTTCCTTAAT  44

seq1  AATGTATGTTACTT-AAGGCAATACTGATCATTTAAGGGATAAATTCAAT  99
      |||| ||||||||| ||| |||||||||||||||||||||||||||||||
seq2  AATG-ATGTTACTTAAAGCCAATACTGATCATTTAAGGGATAAATTCAAT  93

seq1  TTCTTGGCCAAACTATTCTTTTCAGAG-AAATGTTTTTAATGGCTCATGC  148
      ||||||||||||||||||||||||||| ||||||||| ||||||||||||
seq2  TTCTTGGCCAAACTATTCTTTTCAGAGAAAATGTTTTAAATGGCTCATGC  143

seq1  AGCATTTGTGTTCAAATTGTAAACGAATCAAAAATAGGTATTAACACAGT  198
      ||||||||||||||||||||||||| ||||||||||||||||||||||||
seq2  AGCATTTGTGTTCAAATTGTAAACG-ATCAAAAATAGGTATTAACACAGT  192

seq1  TTGTGGTGCAACCCAACACATGGATCCAAGGGAACGTAAAACCTAAGCAT  248
      |||| |||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGT-GTGCAACCCAACACATGGATCCAAGGGAACGTAAAACCTAAGCAT  241

seq1  ATATAATATAAGAGTTTCTTGTGGGCAGAATTCCAAGACATTTGCTCACT  298
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATATAATATAAGAGTTTCTTGTGGGCAGAATTCCAAGACATTTGCTCACT  291

seq1  ATAATATGGTTCTATTCGCCTTATAAAGTAAAATCAGCTGTTTGTGTTCC  348
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATAATATGGTTCTATTCGCCTTATAAAGTAAAATCAGCTGTTTGTGTTCC  341

seq1  ACACAAATTTGACATATACAAAAACAAAAAGGAAAAAAAAGGAACACTTT  398
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACACAAATTTGACATATACAAAAACAAAAAGGAAAAAAAAGGAACACTTT  391

seq1  GGCCCATGTTTAGTATATTCTCTACCTACATTCCCCTTAGTAATAATTAA  448
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGCCCATGTTTAGTATATTCTCTACCTACATTCCCCTTAGTAATAATTAA  441

seq1  GAATTTGCTCATTCAAATGATAATTCATAATTCATATAATATTCAGAGAT  498
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTTGCTCATTCAAATGATAATTCATAATTCATATAATATTCAGAGAT  491

seq1  ATTTAACATCTGGATTTTTAATTCTCTATGTTTTAATGACTGTAGGGAAT  548
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTTAACATCTGGATTTTTAATTCTCTATGTTTTAATGACTGTAGGGAAT  541

seq1  AGATCACTATTATTTTCAAAACACAACAATTTTTTTCTTTGTTCATTTGC  598
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGATCACTATTATTTTCAAAACACAACAATTTTTTTCTTTGTTCATTTGC  591

seq1  TGTGTTTCAAATATCCTCCAACTGTCATTTTGCGTTATTTGGAATCAGCA  648
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTGTTTCAAATATCCTCCAACTGTCATTTTGCGTTATTTGGAATCAGCA  641

seq1  CCCTGAGTAGTTTATGCTTTTTTAAAATATTTATTTAACATCAGAAGATA  698
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCCTGAGTAGTTTATGCTTTTTTAAAATATTTATTTAACATCAGAAGATA  691

seq1  AATGATATTTTGTTTTTTAGTTTTCAGAACTGAAAGCATAAATAATGGGT  748
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATGATATTTTGTTTTTTAGTTTTCAGAACTGAAAGCATAAATAATGGGT  741

seq1  TTTTTCTCTCTAGGGTAAAGCATCTAGTCACTCAGCCTATATTAATATTT  798
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTTTCTCTCTAGGGTAAAGCATCTAGTCACTCAGCCTATATTAATATTT  791

seq1  AAATAGTTTGTAAAGTGTTGTAAGATTAAAATTTAGTTATATAATTTCTC  848
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAATAGTTTGTAAAGTGTTGTAAGATTAAAATTTAGTTATATAATTTCTC  841

seq1  CCTCTCATTTCTTTCTTCCTACCACTCTTATCTATGTTCTCTCTATCTTC  898
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTCTCATTTCTTTCTTCCTACCACTCTTATCTATGTTCTCTCTATCTTC  891

seq1  CTTGGTCTTTCTCAAAGTTACAGATTTTTCCTTAATTGTTGTTTCATATA  948
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTGGTCTTTCTCAAAGTTACAGATTTTTCCTTAATTGTTGTTTCATATA  941

seq1  CATAATGTTTTCCTATTTTTTTACATTTTATATTATGTATTACATAAAAT  998
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATAATGTTTTCCTATTTTTTTACATTTTATATTATGTATTACATAAAAT  991

seq1  TATGTGCTACATGTAAAAATATATACATTATGTTCATCTATTCTATTTCC  1048
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATGTGCTACATGTAAAAATATATACATTATGTTCATCTATTCTATTTCC  1041

seq1  CTATCATATAATGTATTTTCCAATAATATATTTTCCTAGAGCAGAAAATA  1098
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTATCATATAATGTATTTTCCAATAATATATTTTCCTAGAGCAGAAAATA  1091

seq1  CCATGTCTTTGCAGAGAATGGGAATTC  1125
      |||||||||||||||||||||||||||
seq2  CCATGTCTTTGCAGAGAATGGGAATTC  1118