BAC Information

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BAC

Clone NameB6Ng01-032D07
Chromosome1 (Build37)
Map Location 159,971,056 - 160,106,441
singlet/doubletdoublet
Overlap genenone
Upstream gene1700057K13Rik, Rasal2, Gabarapl2-ps1_1522.1, 2810025M15Rik, BC026585, Lztr2, LOC664935, LOC100039217
Downstream gene6430517E21Rik, Astn1, Pappa2, 4930562F17Rik, EG240853
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-032D07.bB6Ng01-032D07.g
ACCDH861611DH861612
length926248
definitionDH861611|Mus musculus domesticus DNA, BAC clone: B6Ng01-032D07, 5' end.DH861612|Mus musculus domesticus DNA, BAC clone: B6Ng01-032D07, 3' end.
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(160,105,520 - 160,106,441)(159,971,056 - 159,971,303)
sequence
gaattctttgtttagctttgagccccatcccttattggggttatttgatt
ttctggagtctccttcttgagttctttatatatataaatgtatatatata
tattagacattagtcccctatctgacttaggataggtaaagatcctttcc
caatctgttggtggcctttttgtcttattgatggtgtcttttgccttgca
gaaacttcaaaagggggaaaacattgagtttataagagactttgaccccg
gagattgaagagagagctctacacagagtgatgggaagaagccctgaaaa
cccttgtgatctctaggaaagaacagaaaaaggagaaggaaaagaataag
ataagcagcccctggaggacaccatccaatttcacatggtttacaggaat
cggtaacaggtggaaaagagacactaagagtttaggaagaaaaaatagcc
caaggtctctaaagtcattagtgttctccagagagaaaaaaaattggaag
taatgtggatatacacatattctgataaatattaatagataggtatagat
atcactatagattgatatagttacagatacttatgagaacaggtttatca
taaaattgacttaggtgattatggaagcaagggagtcccatagtatgtca
tccatgaaccggagaaacaggaacattgaatttgactcagttctaggcca
aaggcccatgaaccacaggagtcaaatagtgaaactctgttttctaagcc
aaaggcctgagaagccaagggaccactagtgcaagtccgagagttcaaag
gcaggagttctaatgctcaagaagaaatgtgtccctgctctagaacacac
aaaggattctgcttttccatatcttttctgttctattccaggtcttgagc
gcttaacaattccttacatacattgg
tcctttcagaacagggagctgcattcatatctgcagttagataagtggta
ggaatgtgagggaaagaactagaactacaccagattaaaattcagtcctt
ctgtactgagggactggatgaggggtgggagtggaaggtcatctcggctg
agcctcccctgcttcttcccaatgcccctttcctctctgtattaattaga
tctcttttgcttatgctagattgcctttctctccagccgagatcctga
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr1_160105520_160106441
seq2: B6Ng01-032D07.b_44_969 (reverse)

seq1  CCAATGTATGT-AGGAATTGTTAAGCGCTCAAGGACCTGG-ATAGAACAG  48
      ||||||||||| |||||||||||||||||||| ||||||| |||||||||
seq2  CCAATGTATGTAAGGAATTGTTAAGCGCTCAA-GACCTGGAATAGAACAG  49

seq1  -AAAGATATGGAAAAGCAGAATCCTTTGTGTGTTCTAGAGCAGGGACACA  97
       |||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAAGATATGGAAAAGCAGAATCCTTTGTGTGTTCTAGAGCAGGGACACA  99

seq1  TTTCTTCTTGAGCATTAGAACTCCTGCCTTTGAACTCTCGGACTTGCACT  147
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTCTTCTTGAGCATTAGAACTCCTGCCTTTGAACTCTCGGACTTGCACT  149

seq1  AGTGGTCCCTTGGCTTCTCAGGCCTTTGGCTTAGAAAACAGAGTTTCACT  197
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTGGTCCCTTGGCTTCTCAGGCCTTTGGCTTAGAAAACAGAGTTTCACT  199

seq1  ATTTGACTCCTGTGGTTCATGGGCCTTTGGCCTAGAACTGAGTCAAATTC  247
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTTGACTCCTGTGGTTCATGGGCCTTTGGCCTAGAACTGAGTCAAATTC  249

seq1  AATGTTCCTGTTTCTCCGGTTCATGGATGACATACTAT-GGACTCCCTTG  296
      |||||||||||||||||||||||||||||||||||||| |||||||||||
seq2  AATGTTCCTGTTTCTCCGGTTCATGGATGACATACTATGGGACTCCCTTG  299

seq1  CTTCCATAATCACCTAAGTCAATTTTATGATAAACCTGTTCTCATAAGTA  346
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTCCATAATCACCTAAGTCAATTTTATGATAAACCTGTTCTCATAAGTA  349

seq1  TCTGTAACTATATCAATCTATAGTGATATCTATACCTATCTATTAATATT  396
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTGTAACTATATCAATCTATAGTGATATCTATACCTATCTATTAATATT  399

seq1  TATCAGAATATGTGTATATCCACATTACTTCCAATTTTTTTTCTCTCTGG  446
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATCAGAATATGTGTATATCCACATTACTTCCAATTTTTTTTCTCTCTGG  449

seq1  AGAACACTAATGACTTTAGAGACCTTGGGCTATTTTTTCTTCCTAAACTC  496
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGAACACTAATGACTTTAGAGACCTTGGGCTATTTTTTCTTCCTAAACTC  499

seq1  TTAGTGTCTCTTTTCCACCTGTTACCGATTCCTGTAAACCATGTGAAATT  546
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTAGTGTCTCTTTTCCACCTGTTACCGATTCCTGTAAACCATGTGAAATT  549

seq1  GGATGGTGTCCTCCAGGGGCTGCTTATCTTATTCTTTTCCTTCTCCTTTT  596
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGATGGTGTCCTCCAGGGGCTGCTTATCTTATTCTTTTCCTTCTCCTTTT  599

seq1  TCTGTTCTTTCCTAGAGATCACAAGGGTTTTCAGGGCTTCTTCCCATCAC  646
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTGTTCTTTCCTAGAGATCACAAGGGTTTTCAGGGCTTCTTCCCATCAC  649

seq1  TCTGTGTAGAGCTCTCTCTTCAATCTCCGGGGTCAAAGTCTCTTATAAAC  696
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTGTGTAGAGCTCTCTCTTCAATCTCCGGGGTCAAAGTCTCTTATAAAC  699

seq1  TCAATGTTTTCCCCCTTTTGAAGTTTCTGCAAGGCAAAAGACACCATCAA  746
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCAATGTTTTCCCCCTTTTGAAGTTTCTGCAAGGCAAAAGACACCATCAA  749

seq1  TAAGACAAAAAGGCCACCAACAGATTGGGAAAGGATCTTTACCTATCCTA  796
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAAGACAAAAAGGCCACCAACAGATTGGGAAAGGATCTTTACCTATCCTA  799

seq1  AGTCAGATAGGGGACTAATGTCTAATATATATATATACATTTATATATAT  846
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTCAGATAGGGGACTAATGTCTAATATATATATATACATTTATATATAT  849

seq1  AAAGAACTCAAGAAGGAGACTCCAGAAAATCAAATAACCCCATTAA-AAA  895
      |||||||||||||||||||||||||||||||||||||||||| |||   |
seq2  AAAGAACTCAAGAAGGAGACTCCAGAAAATCAAATAACCCCAATAAGGGA  899

seq1  TGGGGCTCAAAGCTAAACAAAGAATTC  922
      |||||||||||||||||||||||||||
seq2  TGGGGCTCAAAGCTAAACAAAGAATTC  926

seq1: chr1_159971056_159971303
seq2: B6Ng01-032D07.g_76_323

seq1  TCCTTTCAGAACAGGGAGCTGCATTCATATCTGCAGTTAGATAAGTGGTA  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCCTTTCAGAACAGGGAGCTGCATTCATATCTGCAGTTAGATAAGTGGTA  50

seq1  GGAATGTGAGGGAAAGAACTAGAACTACACCAGATTAAAATTCAGTCCTT  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGAATGTGAGGGAAAGAACTAGAACTACACCAGATTAAAATTCAGTCCTT  100

seq1  CTGTACTGAGGGACTGGATGAGGGGTGGGAGTGGAAGGTCATCTCGGCTG  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGTACTGAGGGACTGGATGAGGGGTGGGAGTGGAAGGTCATCTCGGCTG  150

seq1  AGCCTCCCCTGCTTCTTCCCAATGCCCCTTTCCTCTCTGTATTAATTAGA  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGCCTCCCCTGCTTCTTCCCAATGCCCCTTTCCTCTCTGTATTAATTAGA  200

seq1  TCTCTTTTGCTCATGCTAGATTGCCTTTCTCTCCAGCCGAGATCCTGA  248
      ||||||||||| ||||||||||||||||||||||||||||||||||||
seq2  TCTCTTTTGCTTATGCTAGATTGCCTTTCTCTCCAGCCGAGATCCTGA  248