BAC Information

Click to search

BAC

Clone NameB6Ng01-032D19
Chromosome1 (Build37)
Map Location 132,417,126 - 132,418,135
singlet/doubletsinglet
Overlap genenone
Upstream geneThsd7b, LOC100042745, LOC100042740, Daf2, Cd55
Downstream geneZp3r, C4bp, C4bp-ps1, Pfkfb2, Yod1, AA986860, Fcamr, Pigr, Faim3, Il24, Il20, Il19, Il10, Mapkapk2, Dyrk3, Lgtn, Rassf5, Ikbke, Srgap2, LOC100042826, LOC100042821
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-032D19.bB6Ng01-032D19.g
ACCDH861631DH861632
length1,0091,035
definitionDH861631|Mus musculus domesticus DNA, BAC clone: B6Ng01-032D19, 5' end.DH861632|Mus musculus domesticus DNA, BAC clone: B6Ng01-032D19, 3' end.
singlet/doubletsinglet---
BLAST hituniqueno hit data
sequence
gaattccaagtccaaggtcttgctaaggacgaactaggactgttggaaca
ctggcggacggctttagctatgtcagaattcaatcttaaaaggcacttat
gataggaaaatattgaaagagagcacgtggatccatacactagactaact
cgggaatggaacgcgggaatgaaaaattactgtatgggtagggaacacta
gactccaggaggagagcttccttgaaactcttttgcctcatgagtgactt
ttaagcctcccagcttgtccagttgactcaaccggagagcgtagcaatac
aagacatagaaaacaaaacaacaaacaaacaaaaaatacagtccttacac
ttgaggctcagggaacattatagaagagaggtgaaagattataagagcca
gaggatcagggagctgcaagataaactcttctagggaaaaaaatagcaga
gagagagacagagagacagacagacagagagagacagagggagggggaga
gagagacagagggagagagagagaagacagcattggtgaattaggttaga
gagaggagtaggaggtaaatttgatcaaaatgcagtgtatgaaattcttt
aaaagttaatatttttaaaagctgtaagcagaaaataagcatcacacatg
atctatactcccaacccccaagaaactctagcttccagagttagtatttg
gacaaacagctgagtgttcttactaagaatgtgtgtttacagaaaaacaa
agttgcaaactccttcccatgctcacatgcacagacacaggaacctgggc
acacagatctcctgctcattacagttagctttatcacatattcttcttct
aatgagaaagaaaatgcttgttaaaaattgaaatacgattcatagaaaga
caccaaaaactgaaaaaaaaaatggtgaagaaagtcagtatccaggatgc
tcatattgctcagcctgtctatgtcacaccacttggagagtgtggggcaa
aagctgatg
gaattctcagctccttctgctccatgcttgccttgatgctgctatgctcc
tgccttggtgataatggactgaacctgtaagccagcctcaattaaatgtt
gtccttataagagtttcattgatcatggtgtctgttcacagcagtaaaat
cctaactaagacagaagttggtatcaggagtaggatattgctgtgacagg
cctgaccatgcttttctttggaagagtgtggattttgggactttgaattt
ggaaagtggtagaatgctttaagtgggggcttaatagactatcctagcag
gaagaaggaatactttgttgctggcagtgatttgagctatgcagatctgg
ctcaagaggtttccatagagaagagctttagtatgcggcctagagaccat
ttttctgttattttggtgaagaatgtggctgctttttgcccttgtctgaa
gagtctacctgagggtaaggtaaagggatttatactaattcattgacaaa
ggaagtctcaaaaacaaaaacaaacaaacaaaaacccagaagagaccttg
ttctctggtgaagtctcatgaaaagcattttgaacaagcataacaagctg
agaaagaaaaatacaatatatatggtttaagtattaaagaggcaccagaa
agtagaatagagctgaatcctatattctaggatacaacatattaagggaa
tgtgactttggggcaagattgtacccaactaaatttagatcccagcatgg
tggttggtacacacgtttaattccaggaaataatgccaagcagatctctg
agttcaagtccagcctgaaacagagccaagttctaggtgaagaaaagata
aatccaggcatgatggtacataccttttaatgtatgtatgcaggagagag
ggatgcagatctctgagttcaggtcatatacagagcaagttccaggacag
ccaagcttaaggcaattggatgagttggaaaacagaaaactggtgataat
gtaatagaacaggtggtgtggttgtgtgggggcac
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr1_132417126_132418135
seq2: B6Ng01-032D19.b_45_1053

seq1  GAATTCCAAGTCCAAGGTCTTGCTAAGGACGAACTAGGACTGTTGGAACA  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCCAAGTCCAAGGTCTTGCTAAGGACGAACTAGGACTGTTGGAACA  50

seq1  CTGGCGGACGGCTTTAGCTATGTCAGAATTCAATCTTAAAAGGCACTTAT  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGGCGGACGGCTTTAGCTATGTCAGAATTCAATCTTAAAAGGCACTTAT  100

seq1  GATAGGAAAATATTGAAAGAGAGCACGTGGATCCATACACTAGACTAACT  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GATAGGAAAATATTGAAAGAGAGCACGTGGATCCATACACTAGACTAACT  150

seq1  CGGGAATGGAACGCGGGAATGAAAAATTACTGTATGGGTAGGGAACACTA  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CGGGAATGGAACGCGGGAATGAAAAATTACTGTATGGGTAGGGAACACTA  200

seq1  GACTCCAGGAGGAGAGCTTCCTTGAAACTCTTTTGCCTCATGAGTGACTT  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GACTCCAGGAGGAGAGCTTCCTTGAAACTCTTTTGCCTCATGAGTGACTT  250

seq1  TTAAGCCTCCCAGCTTGTCCAGTTGACTCAACCGGAGAGCGTAGCAATAC  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTAAGCCTCCCAGCTTGTCCAGTTGACTCAACCGGAGAGCGTAGCAATAC  300

seq1  AAGACATAGAAAACAAAACAACAAACAAACAAAAAATACAGTCCTTACAC  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGACATAGAAAACAAAACAACAAACAAACAAAAAATACAGTCCTTACAC  350

seq1  TTGAGGCTCAGGGAACATTATAGAAGAGAGGTGAAAGATTATAAGAGCCA  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGAGGCTCAGGGAACATTATAGAAGAGAGGTGAAAGATTATAAGAGCCA  400

seq1  GAGGATCAGGGAGCTGCAAGATAAACTCTTCTAGGGAAAAAAATAGCAGA  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGGATCAGGGAGCTGCAAGATAAACTCTTCTAGGGAAAAAAATAGCAGA  450

seq1  GAGAGAGACAGAGAGACAGACAGACAGAGAGAGACAGAGGGAGGGGGAGA  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGAGAGACAGAGAGACAGACAGACAGAGAGAGACAGAGGGAGGGGGAGA  500

seq1  GAGAGACAGAGGGAGAGAGAGAGAAGACAGCATTGGTGAATTAGGTTAGA  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGAGACAGAGGGAGAGAGAGAGAAGACAGCATTGGTGAATTAGGTTAGA  550

seq1  GAGAGGAGTAGGAGGTAAATTTGATCAAAATGCAGTGTATGAAATTCTTT  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGAGGAGTAGGAGGTAAATTTGATCAAAATGCAGTGTATGAAATTCTTT  600

seq1  AAAAGTTAATATTTTTAAAAGCTGTAAGCAGAAAATAAGCATCACACATG  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAAGTTAATATTTTTAAAAGCTGTAAGCAGAAAATAAGCATCACACATG  650

seq1  ATCTATACTCCCAACCCCCAAGAAACTCTAGCTTCCAGAGTTAGTATTTG  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATCTATACTCCCAACCCCCAAGAAACTCTAGCTTCCAGAGTTAGTATTTG  700

seq1  GACAAACAGCTGAGTGTTCTTACTAAGAATGTGTGTTTACAGAAAAACAA  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GACAAACAGCTGAGTGTTCTTACTAAGAATGTGTGTTTACAGAAAAACAA  750

seq1  AGTTGCAAACTCCTTCCCATGCTCACATGCACAGACACAGGAACCTGGGC  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTTGCAAACTCCTTCCCATGCTCACATGCACAGACACAGGAACCTGGGC  800

seq1  ACACAGATC-CCTGCTCATTACAGTTAGCTTTATCACATATTC-TCTTCT  848
      ||||||||| ||||||||||||||||||||||||||||||||| ||||||
seq2  ACACAGATCTCCTGCTCATTACAGTTAGCTTTATCACATATTCTTCTTCT  850

seq1  AATGAGAAAGAAAATGCTTGTTAAAAATTGAAATACGATTCAATAGAAAG  898
      ||||||||||||||||||||||||||||||||||||||||| ||||||||
seq2  AATGAGAAAGAAAATGCTTGTTAAAAATTGAAATACGATTC-ATAGAAAG  899

seq1  ACACCAAAAACTGAAAAAAAAAATGGTGAAGGAAAAGTCAGTATCAAGAA  948
      |||||||||||||||||||||||||||||||  |||||||||||| || |
seq2  ACACCAAAAACTGAAAAAAAAAATGGTGAAG--AAAGTCAGTATCCAGGA  947

seq1  TGCTCATATTGCTCAGCCTGTCTATGTCACAGCAACTGGAGAGTGTGGGG  998
      ||||||||||||||||||||||||||||||| ||  ||||||||||||||
seq2  TGCTCATATTGCTCAGCCTGTCTATGTCACACCACTTGGAGAGTGTGGGG  997

seq1  CAAGAGCTGATG  1010
      ||| ||||||||
seq2  CAAAAGCTGATG  1009