BAC Information

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BAC

Clone NameB6Ng01-032G04
Chromosome1 (Build37)
Map Location 30,638,807 - 30,640,005
singlet/doubletsinglet
Overlap genenone
Upstream geneLOC100040665, LOC665944
Downstream geneEG624138, LOC100040699, Phf3, EG638995, Ptp4a1, EG435615, LOC669402, EG435616, 4931428L18Rik, LOC666020, Gluld1, 4930521A18Rik, EG226957, EG624262, LOC624275
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-032G04.bB6Ng01-032G04.g
ACCDH861739DH861740
length1,1791,076
definitionDH861739|Mus musculus domesticus DNA, BAC clone: B6Ng01-032G04, 5' end.DH861740|Mus musculus domesticus DNA, BAC clone: B6Ng01-032G04, 3' end.
singlet/doubletsinglet---
BLAST hituniqueno hit data
sequence
gaattcacttgtattttatcaagtgcaacattagtcatgcaatgtgctga
gatatgtgtgcacagtttcatgtattatttattcctgatagtaactttta
atttggtggtaaccttccctatttctcttaagaaaactcaagctcacatg
gtttgagtaacttccccaatatcacacaatgagtgagatctgagcaaact
gagaaatcaagttgtagtagtcaaatagcaaatgaactaatattcatttt
aaaattctgtgcagaaattcacaaatactcactgagaatgtttctgtttg
gtaatgaattaagcattcatataaaatataatttataaagcctctactca
gatgtttgtcgtttttatgaagtcccatctttagctaatgacatcaataa
gttattttccatacatgtatagtgttctgtgcttatgtgcatcataaggt
gaagtatcactaaacaccgagcatgctccatgacttaggattcggttatt
aaccatcacaggcaccaacgttgcaccaaagctgcaatttggcttctaga
ttaatcatcaaaatgcaacacaagctcttggtctagttccacttctaata
atcatttttaaccacttgccatctccagtccttcaccttctgcctttggt
ataatggttagagagtaacctgccattagctgcattgttcaggttctgca
gttcccagagactagaaacaagacatgctgagccattaaatacactgtga
aagtcccaagtggcatttgtttaacttttacatacagtatgctatgaaat
gagcaactgcacagaaaataaaaatgttaagagcctttcctgctaggcca
ttatagtctaagaaaaaaggcaattgttcctttgtgtggcttgtcgcacc
atgtggtcaggagtattttagtctgtgatgttattctggggtaactgaaa
gtgaggatctctccgactagattaattcccaatttccagagtagtgccta
aacatctcaaaggggagagtaaagcgacttaaaagattatattttccgcg
acaaggtcactcttgctggaataatctatgggacaaagtacaatggccag
aatctgggaatgtgaaatcatgacaacagctaaaggggtcatctatttta
atggaatcattctatggaaggctacttac
gaattcctcctccttccttccctgcctctggtactgtctaggagtctaac
gacagacacagcactagaactggaggctctcgggaatggccactttgtga
cctgccatgcagctacattgccaactcacacgtcacacaattatttattc
ttattgtggttcttttattcacacctgtcatattcattacgctgcaggtg
ctgtgctaaagtggggacaccatgatgaatagaactgactaggtttctgt
ctgtattgggcttccattcagatagtgaatacagataaggatataaaaat
caccaaaggagctgggctgtggtggcgcatgcctttaatcccagcgcttg
ggaggcagaggcaggtgcagttctgagttcaaagctagcctggtctacaa
agtgagttccaggacagctagagctatacagagaaaccctgtcttgaaaa
aaaaatggatatatatatatatatagatagatagatagatagatagatag
aatcaccaaaggaattataaatcgaggtaagggcaatgaaggaaagaaaa
agaagttgaggtatccagtttgaaggaatgggacaagacatattgtagta
cggtggctggggtaaactgctcaaagaagattcaagttacatgtagattg
gagtccattttaagtgattttcatgtactgattctgttaacagtctcaaa
tctctatctatctatctatctatctatctatctatctatctatctatcta
tctatctatctatcatctatttacaccccaaatgctgcccctttcctggg
tccccctcacagagtccctcctccctcccctgagagggtggggtccaccc
tgtgtatccccctaatcgtgtcatcaagtctctgcaggattaggtccatc
ctccctcactgggccagactatgcagctctgttggggtatggattcacag
tcagactactgcctttagaaggcccccacccgtgtcatggtatccaccca
tagatgaacaaacccatggacaaaggtctcatggggctcggacaaatgaa
gttgccagattggtacatccagagaa
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr1_30638807_30640005
seq2: B6Ng01-032G04.b_43_1221

seq1  GAATTCACTTGTATTTTATCAAGTGCAACATTAGTCATGCAATGTGCTGA  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCACTTGTATTTTATCAAGTGCAACATTAGTCATGCAATGTGCTGA  50

seq1  GATATGTGTGCACAGTTTCATGTATTATTTATTCCTGATAGTAACTTTTA  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GATATGTGTGCACAGTTTCATGTATTATTTATTCCTGATAGTAACTTTTA  100

seq1  ATTTGGTGGTAACCTTCCCTATTTCTCTTAAGAAAACTCAAGCTCACATG  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTTGGTGGTAACCTTCCCTATTTCTCTTAAGAAAACTCAAGCTCACATG  150

seq1  GTTTGAGTAACTTCCCCAATATCACACAATGAGTGAGATCTGAGCAAACT  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTTTGAGTAACTTCCCCAATATCACACAATGAGTGAGATCTGAGCAAACT  200

seq1  GAGAAATCAAGTTGTAGTAGTCAAATAGCAAATGAACTAATATTCATTTT  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGAAATCAAGTTGTAGTAGTCAAATAGCAAATGAACTAATATTCATTTT  250

seq1  AAAATTCTGTGCAGAAATTCACAAATACTCACTGAGAATGTTTCTGTTTG  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAATTCTGTGCAGAAATTCACAAATACTCACTGAGAATGTTTCTGTTTG  300

seq1  GTAATGAATTAAGCATTCATATAAAATATAATTTATAAAGCCTCTACTCA  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTAATGAATTAAGCATTCATATAAAATATAATTTATAAAGCCTCTACTCA  350

seq1  GATGTTTGTCGTTTTTATGAAGTCCCATCTTTAGCTAATGACATCAATAA  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GATGTTTGTCGTTTTTATGAAGTCCCATCTTTAGCTAATGACATCAATAA  400

seq1  GTTATTTTCCATACATGTATAGTGTTCTGTGCTTATGTGCATCATAAGGT  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTTATTTTCCATACATGTATAGTGTTCTGTGCTTATGTGCATCATAAGGT  450

seq1  GAAGTATCACTAAACACCGAGCATGCTCCATGACTTAGGATTCGGTTATT  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAAGTATCACTAAACACCGAGCATGCTCCATGACTTAGGATTCGGTTATT  500

seq1  AACCATCACAGGCACCAACGTTGCACCAAAGCTGCAATTTGGCTTCTAGA  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AACCATCACAGGCACCAACGTTGCACCAAAGCTGCAATTTGGCTTCTAGA  550

seq1  TTAATCATCAAAATGCAACACAAGCTCTTGGTCTAGTTCCACTTCTAATA  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTAATCATCAAAATGCAACACAAGCTCTTGGTCTAGTTCCACTTCTAATA  600

seq1  ATCATTTTTAACCACTTGCCATCTCCAGTCCTTCACCTTCTGCCTTTGGT  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATCATTTTTAACCACTTGCCATCTCCAGTCCTTCACCTTCTGCCTTTGGT  650

seq1  ATAATGGTTAGAGAGTAACCTGCCATTAGCTGCATTGTTCAGGTTCTGCA  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATAATGGTTAGAGAGTAACCTGCCATTAGCTGCATTGTTCAGGTTCTGCA  700

seq1  GTTCCCAGAGACTAGAAACAAGACATGCTGAGCCATTAAATACACTGTGA  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTTCCCAGAGACTAGAAACAAGACATGCTGAGCCATTAAATACACTGTGA  750

seq1  AAGTCCCAAGTGGCATTTGTTTAACTTTTACATACAGTATGCTATGAAAT  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGTCCCAAGTGGCATTTGTTTAACTTTTACATACAGTATGCTATGAAAT  800

seq1  GAGCAACTGCACAGAAAATAAAAATGTTAAGAGCCTTTCCTGCTAGGCCA  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGCAACTGCACAGAAAATAAAAATGTTAAGAGCCTTTCCTGCTAGGCCA  850

seq1  TTATAGTCTAAGAAGAAAAGGCAATTGTTCCTTTGTGTGGCTTGTCGCAC  900
      |||||||||||||| |||||||||||||||||||||||||||||||||||
seq2  TTATAGTCTAAGAA-AAAAGGCAATTGTTCCTTTGTGTGGCTTGTCGCAC  899

seq1  CATGTGGTCAGGAGTATTTTAGTCTGTGATGTTATTCTGGGGTAACTGAA  950
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATGTGGTCAGGAGTATTTTAGTCTGTGATGTTATTCTGGGGTAACTGAA  949

seq1  AGTTGAGGATCTCTCCGACTAGATTAATTCCCAATTTCCAGAGTAGTGCC  1000
      || |||||||||||||||||||||||||||||||||||||||||||||||
seq2  AG-TGAGGATCTCTCCGACTAGATTAATTCCCAATTTCCAGAGTAGTGCC  998

seq1  TAAACATCTTCAAAGGTGAGAGTTAAAGCGAACTTTAAAAGATTATA-TA  1049
      |||||||| ||||||| ||||| ||||||||   ||||||||||||| | 
seq2  TAAACATC-TCAAAGGGGAGAG-TAAAGCGA--CTTAAAAGATTATATTT  1044

seq1  TCCGCGGACAAGGTCACTC-TGCTGGAATAATCTATGGGGACAAAGTACA  1098
      ||||| ||||||||||||| |||||||||||||||| |||||||||||||
seq2  TCCGC-GACAAGGTCACTCTTGCTGGAATAATCTAT-GGGACAAAGTACA  1092

seq1  ATGGCCAGGATCCTGGGAATATGTGAAATCAGTGAACAACAAGCTAAAGG  1148
      |||||||| || ||||||  ||||||||||| || ||||| |||||||||
seq2  ATGGCCAGAAT-CTGGGA--ATGTGAAATCA-TG-ACAAC-AGCTAAAGG  1136

seq1  TGCTACAATTCTATTTTATATGGAATTCTATCTATTGTAAAGTCTACTTA  1198
       |  |    ||||||||| |||||| ||  ||||| |  ||| |||||||
seq2  GGTCA----TCTATTTTA-ATGGAA-TCATTCTATGG--AAGGCTACTTA  1178

seq1  C  1199
      |
seq2  C  1179