BAC Information

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BAC

Clone NameB6Ng01-032L16
Chromosome1 (Build37)
Map Location 160,222,950 - 160,393,254
singlet/doubletdoublet
Overlap gene6430517E21Rik, Astn1
Upstream geneRasal2, Gabarapl2-ps1_1522.1, 2810025M15Rik, BC026585, Lztr2, LOC664935, LOC100039217
Downstream genePappa2, 4930562F17Rik, EG240853, LOC664972, Rfwd2, EG620484
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-032L16.bB6Ng01-032L16.g
ACCDH861976DH861977
length1,082367
definitionDH861976|Mus musculus domesticus DNA, BAC clone: B6Ng01-032L16, 5' end.DH861977|Mus musculus domesticus DNA, BAC clone: B6Ng01-032L16, 3' end.
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(160,222,950 - 160,224,044)(160,392,882 - 160,393,254)
sequence
gaattcacaacgggacaacatagagccctaccaatatctataaaggcaac
atttttgcttaatcattgaaggcaaaaacctcccagaaggctcctcgagc
aatggcctgtggccgttctcctctggccccatcagagggccacaaatcag
agtgctgctttcctttcagagtgatgggttactgtttcctcaagtacagg
ttcatgtgcaataactgaccccagaaagactgaacagcacagtggaagaa
cttgtcacattaaatgatcagaaaaccattactacctgatggagggttga
tagtgcagaagtgatttcagagactccccacaggccagttctgagccatc
tccctggagttaactggctgctaagctaactagacttgggtttggggctt
agtgaggggaaaagaatctaccaagaagagaaaaaaaagatacacggaat
tgtggaggataaattagatttcactttattgggctggatgaattctctgc
taaaaatagaggtttaatttttcgtaagaaggaaaaagagcgccctaaac
ttgccttatggagagttttgggcacacatgcctagactcttacacattta
ctgaacgttgagttaatactctggcttctctgcttttgcctgagcaggtg
ttagtgtagctaatccaaagcctaagtcattccctctctccctcagtgat
tccgtgggaatctcctctgtattctttagaagaaattcaagaaccaatat
catataagcaaggggtataaactgaagtcttttccagaactggcctgggc
taagcacaggagatacacatagcaagcaaggaaagatgggaaggtccttg
gtgtgccagctgcctagcttccgggccttgtcctttctgtgtccatgttt
gggagttgttaaagcatgttaatgggttccttagtgtctgttctattgtc
ctcccattccataatctcctacacttgtttcgatacccacattagcctgg
acacattattatgtactataatggtaaatgaaaaaaaacccttcccaatt
aaatgatttcaatagctcaattctgtctacaa
ttgggatttctcagagggtatataaatgctgggccctagaggcatggtgg
gttgttggttgttggttgtttgctattggttgttgttggtcattgtttgt
gaggtagtcatgtgtaaagaagaaacaagaataaatcagaaatcctgatg
gcaaagagcaaacttgctccaaggaacttggtggccctaatcagcacgaa
gcagtctaatgataacatcacctctttctgttctatactttttatctttc
ctagtaagtatttgagggttgaaatggtagagaagagcgagaaagaagaa
cccagtaacattcactgggtagagtaaacagtgtatagaaaggggatgat
atgttgctttctctaag
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr1_160222950_160224044
seq2: B6Ng01-032L16.b_46_1127

seq1  GAATTCACAACGGGACAACATAGAGCCCTACCAATATCTATAAAGGCAAC  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCACAACGGGACAACATAGAGCCCTACCAATATCTATAAAGGCAAC  50

seq1  ATTTTTGCTTAATCATTGAAGGCAAAAACCTCCCAGAAGGCTCCTCGAGC  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTTTTGCTTAATCATTGAAGGCAAAAACCTCCCAGAAGGCTCCTCGAGC  100

seq1  AATGGCCTGTGGCCGTTCTCCTCTGGCCCCATCAGAGGGCCACAAATCAG  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATGGCCTGTGGCCGTTCTCCTCTGGCCCCATCAGAGGGCCACAAATCAG  150

seq1  AGTGCTGCTTTCCTTTCAGAGTGATGGGTTACTGTTTCCTCAAGTACAGG  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTGCTGCTTTCCTTTCAGAGTGATGGGTTACTGTTTCCTCAAGTACAGG  200

seq1  TTCATGTGCAATAACTGACCCCAGAAAGACTGAACAGCACAGTGGAAGAA  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCATGTGCAATAACTGACCCCAGAAAGACTGAACAGCACAGTGGAAGAA  250

seq1  CTTGTCACATTAAATGATCAGAAAACCATTACTACCTGATGGAGGGTTGA  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTGTCACATTAAATGATCAGAAAACCATTACTACCTGATGGAGGGTTGA  300

seq1  TAGTGCAGAAGTGATTTCAGAGACTCCCCACAGGCCAGTTCTGAGCCATC  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAGTGCAGAAGTGATTTCAGAGACTCCCCACAGGCCAGTTCTGAGCCATC  350

seq1  TCCCTGGAGTTAACTGGCTGCTAAGCTAACTAGACTTGGGTTTGGGGCTT  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCCCTGGAGTTAACTGGCTGCTAAGCTAACTAGACTTGGGTTTGGGGCTT  400

seq1  AGTGAGGGGAAAAGAATCTACCAAGAAGAGAAAAAAAAGATACACGGAAT  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTGAGGGGAAAAGAATCTACCAAGAAGAGAAAAAAAAGATACACGGAAT  450

seq1  TGTGGAGGATAAATTAGATTTCACTTTATTGGGCTGGATGAATTCTCTGC  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTGGAGGATAAATTAGATTTCACTTTATTGGGCTGGATGAATTCTCTGC  500

seq1  TAAAAATAGAGGTTTAATTTTTCGTAAGAAGGAAAAAGAGCGCCCTAAAC  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAAAAATAGAGGTTTAATTTTTCGTAAGAAGGAAAAAGAGCGCCCTAAAC  550

seq1  TTGCCTTATGGAGAGTTTTGGGCACACATGCCTAGACTCTTACACATTTA  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGCCTTATGGAGAGTTTTGGGCACACATGCCTAGACTCTTACACATTTA  600

seq1  CTGAACGTTGAGTTAATACTCTGGCTTCTCTGCTTTTGCCTGAGCAGGTG  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGAACGTTGAGTTAATACTCTGGCTTCTCTGCTTTTGCCTGAGCAGGTG  650

seq1  TTAGTGTAGCTAATCCAAAGCCTAAGTCATTCCCTCTCTCCCTCAGTGAT  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTAGTGTAGCTAATCCAAAGCCTAAGTCATTCCCTCTCTCCCTCAGTGAT  700

seq1  TCCGTGGGAATCTCCTCTGTATTC-TTAGAAGAAATTCAAGAACCAATAT  749
      |||||||||||||||||||||||| |||||||||||||||||||||||||
seq2  TCCGTGGGAATCTCCTCTGTATTCTTTAGAAGAAATTCAAGAACCAATAT  750

seq1  CATATAAGCAAGGGGTATAAACTGAAGTCTTTTCCAGAACTGGCCTGGGC  799
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATATAAGCAAGGGGTATAAACTGAAGTCTTTTCCAGAACTGGCCTGGGC  800

seq1  TAAGCACAGGAGATACACATAGCAAGCAAGGAAAGATGGGAAGGTCCTTG  849
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAAGCACAGGAGATACACATAGCAAGCAAGGAAAGATGGGAAGGTCCTTG  850

seq1  GTGTGCCAGCTGCCTAGCTTCCGGGCCTTGTCCTTTCTGTGTCCATGTTT  899
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTGTGCCAGCTGCCTAGCTTCCGGGCCTTGTCCTTTCTGTGTCCATGTTT  900

seq1  GGGAGTTG-TAAAGCATTGTTAATGGGTTCCCTAAGTGTCTGTTCTATTG  948
      |||||||| ||||||| |||||||||||| ||| ||||||||||||||||
seq2  GGGAGTTGTTAAAGCA-TGTTAATGGGTT-CCTTAGTGTCTGTTCTATTG  948

seq1  TCCTCCCATTCCATAATCTTCCTACACCTTGTTTCCGATACCCCACATTA  998
      |||||||||||||||||| ||||||| ||||||| ||||| |||||||||
seq2  TCCTCCCATTCCATAATC-TCCTACA-CTTGTTT-CGATA-CCCACATTA  994

seq1  GCCTGAACACATTACTATGTTACTATAAATGTTAAAAATGAAAAAAAAAA  1048
      ||||| |||||||| |||| ||||||||  ||   |||||  ||||||||
seq2  GCCTGGACACATTATTATG-TACTATAATGGT---AAATG--AAAAAAAA  1038

seq1  CCCTTCCCAATAAAATGATTTCAAATAGCTCCAATTCTAGTCTACAA  1095
      ||||||||||| |||||||||| ||||||| ||||||| ||||||||
seq2  CCCTTCCCAATTAAATGATTTC-AATAGCT-CAATTCT-GTCTACAA  1082

seq1: chr1_160392882_160393254
seq2: B6Ng01-032L16.g_70_442 (reverse)

seq1  CTTAGAGAAAGCAACATATCATCCCCTTTCTATACACTGTTTACTCTACC  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTAGAGAAAGCAACATATCATCCCCTTTCTATACACTGTTTACTCTACC  50

seq1  CAGTGAATGTTACTGGGTTCTTCTTTCTCGCTCTTCTCTACCATTTCAAC  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGTGAATGTTACTGGGTTCTTCTTTCTCGCTCTTCTCTACCATTTCAAC  100

seq1  CCTCAAATACTTACTAGGAAAGATAAAAAGTATAGAACAGAAAGAGGTGA  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTCAAATACTTACTAGGAAAGATAAAAAGTATAGAACAGAAAGAGGTGA  150

seq1  TGTTATCATTAGACTGCTTCGTGCTGATTAGGGCCACCAAGTTCCTTGGA  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTTATCATTAGACTGCTTCGTGCTGATTAGGGCCACCAAGTTCCTTGGA  200

seq1  GCAAGTTTGCTCTTTGCCATCAGGATTTCTGATTTATTCTTGTTTCTTCT  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCAAGTTTGCTCTTTGCCATCAGGATTTCTGATTTATTCTTGTTTCTTCT  250

seq1  TTACACATGACTACCTCACAAACAATGACCAACAACAACCAATAGCAAAC  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTACACATGACTACCTCACAAACAATGACCAACAACAACCAATAGCAAAC  300

seq1  AACCAACAACCAACAACCCACCATGCCTCTAGGGCCCAGCATTTATATAC  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AACCAACAACCAACAACCCACCATGCCTCTAGGGCCCAGCATTTATATAC  350

seq1  CCTCTGAGAAATCCCAAGAATTC  373
      |||||||||||||||||||||||
seq2  CCTCTGAGAAATCCCAAGAATTC  373