BAC Information

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BAC

Clone NameB6Ng01-033I15
Chromosome1 (Build37)
Map Location 62,556,475 - 62,688,733
singlet/doubletdoublet
Overlap genePard3b
Upstream genenone
Downstream geneLOC667592, Nrp2, LOC100043070, A430093A21Rik, Ndufs1, Eef1b2, Gpr1, 1700039I01Rik, 4930431J08Rik, LOC667644, LOC100042638, Adam23, Gm215
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-033I15.bB6Ng01-033I15.g
ACCDH862561DH862562
length1,156981
definitionDH862561|Mus musculus domesticus DNA, BAC clone: B6Ng01-033I15, 5' end.DH862562|Mus musculus domesticus DNA, BAC clone: B6Ng01-033I15, 3' end.
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(62,556,475 - 62,557,658)(62,687,738 - 62,688,733)
sequence
gaattctttcaaacagtctgttgcgacttttcaatcccaggaccgatgtg
tatcagccatcaggagggagaattgatccttgtagtctgacatttgacaa
gcttcgaattgtgtcctcgttcacctcctttaattcaaacaccgtaaacg
gtactcagctttgtctttataggtcaatccatgtcagagtttgttgtcaa
agtgagttccaaatattaggaaccacaagaaaatctcaggtttgtccatg
actccatggtcagactactggtctacctatttctagttttctgtgagcag
agctgctctttttatactgatatttccatctctttttaagttactgtatg
catgtttttaagttaaaaccattggtttgtctaagcaatctttaactcac
acctgtaatctaagaatttggaaggccgaggaaaaagaattccaacagct
tcaacccagtgtaggcagtctcaggagaaaaaaaaaaaaagacattacca
atgaaaacccacttttattttctatatttaaaaaataatagcatgaaaaa
ctcactaaaaaatacctattaactggacaaaaccacattcgaagcagtgt
tttgtattgcccattcatgtgccatgtgacatgaaactattttgattggg
actgtcacagataatttctacacataaaaatgcacctagggacagctttc
aaatggagttgtcactttctgtttagcaggcaggagatattctattgttg
tcaacccctctttacaaaagcatcgctaatacagtgatgcactgtcctgg
agaagggggctcgccattctgcctgatgggaacagaaggagcaacgctgc
ttgatgtcagggctcccagagctcgagggctcctttgtccaactcagaca
cctttgcacccacaatcctttcacagtcttggaattggatttcttttcct
gtgctggttttagaaaactttaaagatatgtagattgttattcctcttaa
ccacgatagtaaagccacatgaatttgtatctactcacacatgaagtcat
ggaagtagaagcaccctggactgttcctagatttacacacatcaacacat
ctcatcagcccactaccccccccatacccaatgcacccaagtacatatgc
tcacac
gaattcactctccgtccccatatgccaaagtatgatttcacataatttat
ctttagaacatatgaacagatgacttggtaatcataaaagaacaggaaag
acgagagaaagcgagggtataaacaacaggttttgttttatgttccagta
gtaaatagctttgcagatggaacggaacactttctgaagagcagatcaag
agatgggctcaaagagtctgtgggaatggttcacttctcaatctgagctt
agtagccaaccccaacttttaaaagccaggctgtgggcgactgcatggct
atttaaggaaaggaggaagaaagagttgcacctggaagccacagttgcat
gtgagagtcctggcttattttagatctctatttttcctcctttctatcgg
aaaggtgactctgtagggatatcttatgaagaattttctgtctcactgta
gccttgtttccaccctaagttggcatgaactgaggcagcagaggaacact
attatggacttttctgaatggaacaccctcctgcctaattgcattaaact
tggactttctgttcacatggacccaggaagcactgggacgtctacccaat
ttaacgccagtttgaaagctgctcacagtggatctcagtgttcagtgctg
atgggaattctcagacacacattcctgtatcaaccacttttccaattcct
tccacgggcctgaaattctataacattgctcaaacactaaacagaaaaca
acgaaaacaaatgcaggtgattccagtgaggggaaaagtaatcactcttt
ttagttttggtctctctgtggaccagggaacagagaaatcagctctctga
tcttcctgaagttgcagagatttccttcacaaggtaggttagctttaaag
gaaaaaaaatcaagcagtgggtcttattttatttattctgttgtagcaga
aatgagctcacaagcctccaagctccgcttc
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr1_62556475_62557658
seq2: B6Ng01-033I15.b_44_1199

seq1  GAATTCTTTCAAACAGTCTGTTGCGACTTTTCAATCCCAGGACCGATGTG  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCTTTCAAACAGTCTGTTGCGACTTTTCAATCCCAGGACCGATGTG  50

seq1  TATCAGCCATCAGGAGGGAGAATTGATCCTTGTAGTCTGACATTTGACAA  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATCAGCCATCAGGAGGGAGAATTGATCCTTGTAGTCTGACATTTGACAA  100

seq1  GCTTCGAATTGTGTCCTCGTTCACCTCCTTTAATTCAAACACCGTAAACG  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCTTCGAATTGTGTCCTCGTTCACCTCCTTTAATTCAAACACCGTAAACG  150

seq1  GTACTCAGCTTTGTCTTTATAGGTCAATCCATGTCAGAGTTTGTTGTCAA  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTACTCAGCTTTGTCTTTATAGGTCAATCCATGTCAGAGTTTGTTGTCAA  200

seq1  AGTGAGTTCCAAATATTAGGAACCACAAGAAAATCTCAGGTTTGTCCATG  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTGAGTTCCAAATATTAGGAACCACAAGAAAATCTCAGGTTTGTCCATG  250

seq1  ACTCCATGGTCAGACTACTGGTCTACCTATTTCTAGTTTTCTGTGAGCAG  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTCCATGGTCAGACTACTGGTCTACCTATTTCTAGTTTTCTGTGAGCAG  300

seq1  AGCTGCTCTTTTTATACTGATATTTCCATCTCTTTTTAAGTTACTGTATG  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGCTGCTCTTTTTATACTGATATTTCCATCTCTTTTTAAGTTACTGTATG  350

seq1  CATGTTTTTAAGTTAAAACCATTGGTTTGTCTAAGCAATCTTTAACTCAC  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATGTTTTTAAGTTAAAACCATTGGTTTGTCTAAGCAATCTTTAACTCAC  400

seq1  ACCTGTAATCTAAGAATTTGGAAGGCCGAGGAAAAAGAATTCCAACAGCT  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACCTGTAATCTAAGAATTTGGAAGGCCGAGGAAAAAGAATTCCAACAGCT  450

seq1  TCAACCCAGTGTAGGCAGTCTCAGGAGAAAAAAAAAAAAAGACATTACCA  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCAACCCAGTGTAGGCAGTCTCAGGAGAAAAAAAAAAAAAGACATTACCA  500

seq1  ATGAAAACCCACTTTTATTTTCTATATTTAAAAAATAATAGCATGAAAAA  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGAAAACCCACTTTTATTTTCTATATTTAAAAAATAATAGCATGAAAAA  550

seq1  CTCACTAAAAAATACCTATTAACTGGACAAAACCACATTCGAAGCAGTGT  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCACTAAAAAATACCTATTAACTGGACAAAACCACATTCGAAGCAGTGT  600

seq1  TTTGTATTGCCCATTCATGTGCCATGTGACATGAAACTATTTTGATTGGG  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTGTATTGCCCATTCATGTGCCATGTGACATGAAACTATTTTGATTGGG  650

seq1  ACTGTCACAGATAATTTCTACACATAAAAATGCACCTAGGGACAGCTTTC  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTGTCACAGATAATTTCTACACATAAAAATGCACCTAGGGACAGCTTTC  700

seq1  AAATGGAGTTGTCACTTTCTGTTTAGCAGGCAGGAGATATTCTATTGTTG  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAATGGAGTTGTCACTTTCTGTTTAGCAGGCAGGAGATATTCTATTGTTG  750

seq1  TCAACCCCTCTTTACAAAAGCATCGCTAATACAGTGATGCACTGTCCTGG  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCAACCCCTCTTTACAAAAGCATCGCTAATACAGTGATGCACTGTCCTGG  800

seq1  AGAAGGGGGCTCGCCATTCTGCCTGATGGGAACAGAAGGAGCAACGCTGC  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGAAGGGGGCTCGCCATTCTGCCTGATGGGAACAGAAGGAGCAACGCTGC  850

seq1  TTGATGTCAGGGCTCCCAGAGCTCGAGGGCTCCTTTGTCCAACTCAGACA  900
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGATGTCAGGGCTCCCAGAGCTCGAGGGCTCCTTTGTCCAACTCAGACA  900

seq1  CCTCTGCACCCAACAATCCTTTCACAGTCTTGGAATTGGATTTCTTTTTC  950
      ||| ||||||| |||||||||||||||||||||||||||||||| |||||
seq2  CCTTTGCACCC-ACAATCCTTTCACAGTCTTGGAATTGGATTTC-TTTTC  948

seq1  CTGTGCTGGTTTTAGAAAACTGTAAAAAGATTAATGTAGATTGTTATT-C  999
      ||||||||||||||||||||| |  ||||||  ||||||||||||||| |
seq2  CTGTGCTGGTTTTAGAAAACTTT--AAAGAT--ATGTAGATTGTTATTCC  994

seq1  TCTGAAACACAGATTAGTAAAGCCACATGAATTTGTTATCTACTCAACAC  1049
      ||| || ||| || ||||||||||||||||||||| ||||||||| ||||
seq2  TCTTAACCAC-GA-TAGTAAAGCCACATGAATTTG-TATCTACTC-ACAC  1040

seq1  ATGAAGTCATGGAAAGTTAAGAAAGCAACCCTGGACTGTCTCTAGATTTA  1099
      |||||||||||| ||||  || |||| ||||||||||||  |||||||||
seq2  ATGAAGTCATGG-AAGT--AG-AAGC-ACCCTGGACTGTTCCTAGATTTA  1085

seq1  CACCCACACCCACACACACTCATCCAGCCCCACCTACCCCCCCACATACA  1149
      ||  |||| | |||||  ||||| ||||||   |||||||||| ||||| 
seq2  CA--CACATCAACACA-TCTCAT-CAGCCC--ACTACCCCCCC-CATACC  1128

seq1  CATATGCACACACAAATGTACACATATGCTCACAC  1184
      || |||||| |    | ||  ||||||||||||||
seq2  CA-ATGCACCC----AAGT--ACATATGCTCACAC  1156

seq1: chr1_62687738_62688733
seq2: B6Ng01-033I15.g_67_1047 (reverse)

seq1  GAAGCGGAGCCTTGGAGGCTTTGTGGAGCCTCATTTCTGCTACCAACAGA  50
      ||||||||| ||||||||| |||| ||| ||||||||||||| |||||||
seq2  GAAGCGGAG-CTTGGAGGC-TTGT-GAG-CTCATTTCTGCTA-CAACAGA  45

seq1  ATAAAATTAAAATAAGACCCACTGCCTTGATTTTTTTTTTCCTTTTAAAG  100
      |||||  ||||||||||||||||| |||||||||||||   | |||||||
seq2  ATAAA--TAAAATAAGACCCACTG-CTTGATTTTTTTT---CCTTTAAAG  89

seq1  CTAAACCTACCTTGTGAAGGAAATCCTCCTGCAACTTCAGGAAGATCAGA  150
      || ||||||||||||||||||||||   ||||||||||||||||||||||
seq2  CT-AACCTACCTTGTGAAGGAAATC--TCTGCAACTTCAGGAAGATCAGA  136

seq1  GAGCTGATTTCTCTGTTCCCTGGTCCACAGAGAGACCAAACCTAAAAAGA  200
      |||||||||||||||||||||||||||||||||||||||| |||||||||
seq2  GAGCTGATTTCTCTGTTCCCTGGTCCACAGAGAGACCAAAACTAAAAAGA  186

seq1  GTGATTACTTTTCCCCTCACTGGAAATCACCTGCATTTGTTTTCGTTTGT  250
      ||||||||||||||||||||||| ||||||||||||||||||||| ||||
seq2  GTGATTACTTTTCCCCTCACTGG-AATCACCTGCATTTGTTTTCG-TTGT  234

seq1  TTTCTGTTTAGTGTTTGAGCAATGTTATAGAATTTCAGGCCCGTGGAAGG  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTCTGTTTAGTGTTTGAGCAATGTTATAGAATTTCAGGCCCGTGGAAGG  284

seq1  AATTGG-AAAGTGGTTGATACAGGAATGTGTGTCTGAGAATTCCCATCAG  349
      |||||| |||||||||||||||||||||||||||||||||||||||||||
seq2  AATTGGAAAAGTGGTTGATACAGGAATGTGTGTCTGAGAATTCCCATCAG  334

seq1  CACTGAACACTGAGATCCACTGTGAGCAGCTTTCAAACTGGCGTTAAATT  399
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CACTGAACACTGAGATCCACTGTGAGCAGCTTTCAAACTGGCGTTAAATT  384

seq1  GGGTAGACGTCCCAGTGCTTCCTGGGTCCATGTGAACAGAAAGTCCAAGT  449
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGGTAGACGTCCCAGTGCTTCCTGGGTCCATGTGAACAGAAAGTCCAAGT  434

seq1  TTAATGCAATTAGGCAGGAGGGTGTTCCATTCAGAAAAGTCCATAATAGT  499
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTAATGCAATTAGGCAGGAGGGTGTTCCATTCAGAAAAGTCCATAATAGT  484

seq1  GTTCCTCTGCTGCCTCAGTTCATGCCAACTTAGGGTGGAAACAAGGCTAC  549
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTTCCTCTGCTGCCTCAGTTCATGCCAACTTAGGGTGGAAACAAGGCTAC  534

seq1  AGTGAGACAGAAAATTCTTCATAAGATATCCCTACAGAGTCACCTTTCCG  599
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTGAGACAGAAAATTCTTCATAAGATATCCCTACAGAGTCACCTTTCCG  584

seq1  ATAGAAAGGAGGAAAAATAGAGATCTAAAATAAGCCAGGACTCTCACATG  649
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATAGAAAGGAGGAAAAATAGAGATCTAAAATAAGCCAGGACTCTCACATG  634

seq1  CAACTGTGGCTTCCAGGTGCAACTCTTTCTTCCTCCTTTCCTTAAATAGC  699
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAACTGTGGCTTCCAGGTGCAACTCTTTCTTCCTCCTTTCCTTAAATAGC  684

seq1  CATGCAGTCGCCCACAGCCTGGCTTTTAAAAGTTGGGGTTGGCTACTAAG  749
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATGCAGTCGCCCACAGCCTGGCTTTTAAAAGTTGGGGTTGGCTACTAAG  734

seq1  CTCAGATTGAGAAGTGAACCATTCCCACAGACTCTTTGAGCCCATCTCTT  799
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCAGATTGAGAAGTGAACCATTCCCACAGACTCTTTGAGCCCATCTCTT  784

seq1  GATCTGCTCTTCAGAAAGTGTTCCGTTCCATCTGCAAAGCTATTTACTAC  849
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GATCTGCTCTTCAGAAAGTGTTCCGTTCCATCTGCAAAGCTATTTACTAC  834

seq1  TGGAACATAAAACAAAACCTGTTGTTTATACCCTCGCTTTCTCTCGTCTT  899
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGAACATAAAACAAAACCTGTTGTTTATACCCTCGCTTTCTCTCGTCTT  884

seq1  TCCTGTTCTTTTATGATTACCAAGTCATCTGTTCATATGTTCTAAAGATA  949
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCCTGTTCTTTTATGATTACCAAGTCATCTGTTCATATGTTCTAAAGATA  934

seq1  AATTATGTGAAATCATACTTTGGCATATGGGGACGGAGAGTGAATTC  996
      |||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATTATGTGAAATCATACTTTGGCATATGGGGACGGAGAGTGAATTC  981