BAC Information

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BAC

Clone NameB6Ng01-034F01
Chromosome1 (Build37)
Map Location 100,788,592 - 100,789,398
singlet/doubletsinglet
Overlap genenone
Upstream genePam, LOC100041823, LOC666153, LOC100040887, Slco6d1, LOC100041868, EG666182
Downstream geneC230078M14Rik, LOC633295
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-034F01.bB6Ng01-034F01.g
ACCDH863106DH863107
length423807
definitionDH863106|Mus musculus domesticus DNA, BAC clone: B6Ng01-034F01, 5' end.DH863107|Mus musculus domesticus DNA, BAC clone: B6Ng01-034F01, 3' end.
singlet/doublet---singlet
BLAST hitno hit dataunique
sequence
agcatgactgaaaagcacttaaagaaatgttcatccagagacgaccccac
ctgggaatccatccttatagagacaccaaatccagacattatttcagatc
ccaagaagtgcttgctgacaagagcctgatagatctgtctcctgagaggc
ttttccagagactgagaaagaggtggatgctcacagccaaccgttggact
gagcatagaatctacaatggaggagtcccggagctcccagggactaaacc
accaaccaaatattacacatggaacaacccatggatccagctgcatacat
agaagaggatagccttgtctggcatccttggaaggagaggcctttggtcc
tgtgaaggcacaatgcgccagtgtaggggaataccagggtggggaagtga
gagtgagtgggtcagtgggggag

gaattcagggcatgaacgcaaagaaggagcaggaagcatgaagagaatta
agaggacataaatggaagctgccttctgaatcacattccatggctcaccc
agtgttgtgcccattttgcaatccccatagcattaccaatcacacaagag
tctttattcaagcttgagctagaaacccaccatcatgaaccagcaggatg
ggagggtgaagccttgagcccagttccaagtaagtgtttatagaggcaag
caagtaagcaacagggtatccaggttggtacacatctgtttgcctggggg
atagggtctactatggaatttgttgccctttaaaatgattggctggtact
gagaagcaaaccttaaactgtcataatagtagatacaactgtaacttctg
ctttcctcctgattgatggttgttagggagtgacctggaaaccagggtaa
ggtgcaggactggtggttcagctttagctcaggttctctatggtagatct
tgaacccaagatggacttggtctgatctttcgccagcatgcctattaaat
aatcctggcctactttcccaggggtggctcccacccacactaggtgatcc
ttcacatcaaccattaattaattaagaaaatttaacctgcaggcttacta
atgtaatccctgaattaaggctcccacttgataaatgactttagcttctg
tcaagttgataaaaactaacatatataatatgtaaatttgtaaatgcatt
gtgatactttatatttggaagttgattttgtgtttgtttgtttgtatgtg
tgtgtgc
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr1_100788592_100789398
seq2: B6Ng01-034F01.g_67_873

seq1  GAATTCAGGGCATGAACGCAAAGAAGGAGCAGGAAGCATGAAGAGAATTA  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCAGGGCATGAACGCAAAGAAGGAGCAGGAAGCATGAAGAGAATTA  50

seq1  AGAGGACATAAATGGAAGCTGCCTTCTGAATCACATTCCATGGCTCACCC  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGAGGACATAAATGGAAGCTGCCTTCTGAATCACATTCCATGGCTCACCC  100

seq1  AGTGTTGTGCCCATTTTGCAATCCCCATAGCATTACCAATCACACAAGAG  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTGTTGTGCCCATTTTGCAATCCCCATAGCATTACCAATCACACAAGAG  150

seq1  TCTTTATTCAAGCTTGAGCTAGAAACCCACCATCATGAACCAGCAGGATG  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTTTATTCAAGCTTGAGCTAGAAACCCACCATCATGAACCAGCAGGATG  200

seq1  GGAGGGTGAAGCCTTGAGCCCAGTTCCAAGTAAGTGTTTATAGAGGCAAG  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGAGGGTGAAGCCTTGAGCCCAGTTCCAAGTAAGTGTTTATAGAGGCAAG  250

seq1  CAAGTAAGCAACAGGGTATCCAGGTTGGTACACATCTGTTTGCCTGGGGG  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAAGTAAGCAACAGGGTATCCAGGTTGGTACACATCTGTTTGCCTGGGGG  300

seq1  ATAGGGTCTACTATGGAATTTGTTGCCCTTTAAAATGATTGGCTGGTACT  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATAGGGTCTACTATGGAATTTGTTGCCCTTTAAAATGATTGGCTGGTACT  350

seq1  GAGAAGCAAACCTTAAACTGTCATAATAGTAGATACAACTGTAACTTCTG  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGAAGCAAACCTTAAACTGTCATAATAGTAGATACAACTGTAACTTCTG  400

seq1  CTTTCCTCCTGATTGATGGTTGTTAGGGAGTGACCTGGAAACCAGGGTAA  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTTCCTCCTGATTGATGGTTGTTAGGGAGTGACCTGGAAACCAGGGTAA  450

seq1  GGTGCAGGACTGGTGGTTCAGCTTTAGCTCAGGTTCTCTATGGTAGATCT  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGTGCAGGACTGGTGGTTCAGCTTTAGCTCAGGTTCTCTATGGTAGATCT  500

seq1  TGAACCCAAGATGGACTTGGTCTGATCTTTCGCCAGCATGCCTATTAAAT  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGAACCCAAGATGGACTTGGTCTGATCTTTCGCCAGCATGCCTATTAAAT  550

seq1  AATCCTGGCCTACTTTCCCAGGGGTGGCTCCCACCCACACTAGGTGATCC  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATCCTGGCCTACTTTCCCAGGGGTGGCTCCCACCCACACTAGGTGATCC  600

seq1  TTCACATCAACCATTAATTAATTAAGAAAATTTAACCTGCAGGCTTACTA  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCACATCAACCATTAATTAATTAAGAAAATTTAACCTGCAGGCTTACTA  650

seq1  ATGTAATCCCTGAATTAAGGCTCCCACTTGATAAATGACTTTAGCTTCTG  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGTAATCCCTGAATTAAGGCTCCCACTTGATAAATGACTTTAGCTTCTG  700

seq1  TCAAGTTGATAAAAACTAACATATATAATATGTAAATTTGTAAATGCATT  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCAAGTTGATAAAAACTAACATATATAATATGTAAATTTGTAAATGCATT  750

seq1  GTGATACTTTATATTTGGAAGTTGATTTTGTGTTTGTTTGTTTGTATGTG  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTGATACTTTATATTTGGAAGTTGATTTTGTGTTTGTTTGTTTGTATGTG  800

seq1  TGTGTGC  807
      |||||||
seq2  TGTGTGC  807


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