BAC Information

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BAC

Clone NameB6Ng01-034L04
Chromosome1 (Build37)
Map Location 45,703,091 - 45,703,996
singlet/doubletsinglet
Overlap genenone
Upstream geneGulp1, LOC100041738, LOC100041752, LOC383640, Col3a1, Col5a2, EG666799, LOC631429, LOC666814
Downstream geneEG666819, Wdr75, EG433297, LOC383644, Slc40a1, LOC670603, EG227054, LOC100042453, EG212225, Dnahc7b, LOC666855
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-034L04.bB6Ng01-034L04.g
ACCDH863373DH863374
length8971,173
definitionDH863373|Mus musculus domesticus DNA, BAC clone: B6Ng01-034L04, 5' end.DH863374|Mus musculus domesticus DNA, BAC clone: B6Ng01-034L04, 3' end.
singlet/doubletsinglet---
BLAST hituniqueno hit data
sequence
gaattctcaacagacgaatctctagtgactgaggaaacacttaaagaaat
ggtcgacattcttactcgtcagggaaatacaaatcaaaatgactccaaga
ctccaccttatacccatctataatcacaatcttctccatggctaagatca
aaacctcaaatgacagcacatcctggtgaggatgcataacaaggggaaca
ctccttcattgctggcgggagtgcaaacttgtacaaccacttttgaaatt
aatttggcagtttctcagaaaattgggaatagttctacctgaagacccag
ctacaccactcctgggcatatactgaaaagatgctccaccataccacaaa
ctccactgtgttcacagcagctttattcataatagccagaaactggaatg
cccctcaaccagagaatggataacgaaaatatggttcattttcacaatgg
agtactagtcagctattaaaaacaatgacttcatgaatattaatatgagg
ggggcaccaggaaaagggtgggctgtgattggggtataaagtgattagaa
ataaattatgaaaaaaagaaatttagaacacattaggtcatgaacagaaa
aaacaaaaattgattctcatcacaccaccaaacttgaaagcaatttgatt
ttaaacttgccagtctcccagaaccactgaaagcaaactactactactcg
taaactttttctgctgcgttattttctttggggtaatcccagtagactgg
agtatcttctgtcccatttcttcttaatcccttgcaacatctttgaatca
gcatgtacatcactctcaatcaaacattgactaagtgctgctttgggaat
atagaggcacttaatgatccttacgtaatcggatttatcatcttttt
gaattctttgtttaggtctgattcccattttttaatagggttatttgatt
ttctggagtctagctgctggaatttctttgtatatattggatattagagc
actattggatgtaaggttaataaagatcttttcccaatatattggttgct
gttttgtcctattgacagtgtcctttgccttacagaagctttgcaatttt
atgaggtcccatttgtcgattgttgatcttagagcataagctattgatgt
tctgttctggaacttctcccctgtgcccatgtattcaaggctcttcccca
ctttctctattagattcagtttatcttgttttatgtggatgtcctttatc
cacttggacttgaggtttgtatagggagataaggatggatcaatttacat
tcttctacatgctaagcgccagttgagccagaaccatttgttgaaaatga
tgtctttttttttttttttcctcctggatggttttagattgtttgtcaaa
gatcaagtgactatcggtgtgtgggttcatttctgggtcttcaattctat
tccactgatctacctgcctgccactgtaccaataccatgcggtttttatc
actattcttctattgaatagcttgaggtcagggatggtgattcccccaga
acttctttcattgttgagaatagtttttgctatcctgtgtttttgttatt
ccaaatgaatttgagaattgctctatctaattctatgaagaattgagttg
gaattttgatggagattgcattgaatctgtagattgcttttggtaagatg
gccatttttactatattaatcctgtcaatccatgagcatgggagatcttt
cagtcttctgagatcttgatttctttcttcagagacttgcagttcttggt
agagtcacaccagatattttatattgttcccgacattgtgaggtgttgtt
tccttattctttcatccttttattctttgatagaggagctactgatgttg
agtaattttatcagctactgctgagtgttacagctagaggtcctgtaaga
ttggtctatgtacctctacactgcaaaggatactgaatttccctccgaag
atcttgatctcttgtcacgctcctagtctcgatctatgaagtcaggtaga
ggacgtaccgtaccaatagtaga
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr1_45703091_45703996
seq2: B6Ng01-034L04.b_65_941

seq1  TCTAGTGACTGAGGAAACACTTAAAGAAATGGTCGACATTCTTACTCGTC  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTAGTGACTGAGGAAACACTTAAAGAAATGGTCGACATTCTTACTCGTC  50

seq1  AGGGAAATACAAATCAAAATGACTCCAAGACTCCACCTTATACCCATCTA  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGGAAATACAAATCAAAATGACTCCAAGACTCCACCTTATACCCATCTA  100

seq1  TAATCACAATCTTCTCCATGGCTAAGATCAAAACCTCAAATGACAGCACA  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAATCACAATCTTCTCCATGGCTAAGATCAAAACCTCAAATGACAGCACA  150

seq1  TCCTGGTGAGGATGCATAACAAGGGGAACACTCCTTCATTGCTGGCGGGA  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCCTGGTGAGGATGCATAACAAGGGGAACACTCCTTCATTGCTGGCGGGA  200

seq1  GTGCAAACTTGTACAACCACTTTTGAAATTAATTTGGCAGTTTCTCAGAA  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTGCAAACTTGTACAACCACTTTTGAAATTAATTTGGCAGTTTCTCAGAA  250

seq1  AATTGGGAATAGTTCTACCTGAAGACCCAGCTACACCACTCCTGGGCATA  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATTGGGAATAGTTCTACCTGAAGACCCAGCTACACCACTCCTGGGCATA  300

seq1  TACTGAAAAGATGCTCCACCATACCACAAACTCCACTGTGTTCACAGCAG  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TACTGAAAAGATGCTCCACCATACCACAAACTCCACTGTGTTCACAGCAG  350

seq1  CTTTATTCATAATAGCCAGAAACTGGAATGCCCCTCAACCAGAGAATGGA  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTTATTCATAATAGCCAGAAACTGGAATGCCCCTCAACCAGAGAATGGA  400

seq1  TAACGAAAATATGGTTCATTTTCACAATGGAGTACTAGTCAGCTATTAAA  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAACGAAAATATGGTTCATTTTCACAATGGAGTACTAGTCAGCTATTAAA  450

seq1  AACAATGACTTCATGAATATTAATATGAGGGGGGCACCAGGAAAAGGGTG  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AACAATGACTTCATGAATATTAATATGAGGGGGGCACCAGGAAAAGGGTG  500

seq1  GGCTGTGATTGGGGTATAAAGTGAATAAGAAAATAAATTAATGAAAAAAA  550
      |||||||||||||||||||||||| ||   ||||||||| ||||||||||
seq2  GGCTGTGATTGGGGTATAAAGTGATTA--GAAATAAATT-ATGAAAAAAA  547

seq1  GAAAATTAAGAACACAATAAGGTCATGAACAGAAAAAACAAAAATTGATT  600
      | ||||| ||||||| || |||||||||||||||||||||||||||||||
seq2  G-AAATTTAGAACAC-ATTAGGTCATGAACAGAAAAAACAAAAATTGATT  595

seq1  CTCATCACA-CACCAAACTTGAAAGCAATTTGATTTTAAACTTGCCAGTC  649
      ||||||||| ||||||||||||||||||||||||||||||||||||||||
seq2  CTCATCACACCACCAAACTTGAAAGCAATTTGATTTTAAACTTGCCAGTC  645

seq1  T-CCAGAA-CACTGAGAAGCAAACTACTACTACTCGTAAAC-TATTCTGC  696
      | |||||| |||||| ||||||||||||||||||||||||| | ||||||
seq2  TCCCAGAACCACTGA-AAGCAAACTACTACTACTCGTAAACTTTTTCTGC  694

seq1  TTGCGTTATTTTC-TTGTGGTAATCCCAGTAGACTGCAGTATCTTCCTGT  745
       |||||||||||| ||| |||||||||||||||||| |||||||| ||||
seq2  -TGCGTTATTTTCTTTGGGGTAATCCCAGTAGACTGGAGTATCTT-CTGT  742

seq1  CACATTTCTTCTCATCCCCTTGCCAACATCTTCTAGAATCAGCATGTACA  795
      | |||||||||| |  |||||| ||||||||  | |||||||||||||||
seq2  CCCATTTCTTCTTAATCCCTTG-CAACATCT--TTGAATCAGCATGTACA  789

seq1  TTCCACTCTCAATCAAAACCATGACTTAGTGTCTGCTTTTGGGGTATATA  845
      |  ||||||||||| ||||  ||||| |||| |||||||  ||| ||   
seq2  T--CACTCTCAATC-AAACATTGACTAAGTG-CTGCTTT--GGGAAT---  830

seq1  ATAGAGGCAACTTAAAATTTGATCCCTCTAAACGTAAATACTGAATTTAT  895
      |||||||| ||||||    |||||| |    ||||||   | ||   | |
seq2  ATAGAGGC-ACTTAA----TGATCCTT----ACGTAA--TCGGA---TTT  866

seq1  ATCATCTTTTT  906
      |||||||||||
seq2  ATCATCTTTTT  877